EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000014149 (Gene tree)
Gene ID: 102358407
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 94929 bases
Position: chrJH126756.1:971466-1066394
Accession: 102358407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000016065	FDF	PF09532.10	2.3e-14	1	1
ENSLACP00000016065	LSM14	PF12701.7	2.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000016176	EDC3-201	1663	XM_005994090	ENSLACP00000016065	513 (aa)	XP_005994152	H3B2E4

Gene Model

Click here to download ENSLACG00000014149's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000014149's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000014149	EDC3	100	77.864	ENSG00000179151	EDC3	100	90.184	Homo_sapiens
ENSLACG00000014149	EDC3	99	55.792	ENSAPOG00000008655	EDC3	99	55.792	Acanthochromis_polyacanthus
ENSLACG00000014149	EDC3	100	71.984	ENSAPOG00000010791	edc3	100	71.984	Acanthochromis_polyacanthus
ENSLACG00000014149	EDC3	100	77.670	ENSAMEG00000008963	EDC3	100	77.670	Ailuropoda_melanoleuca
ENSLACG00000014149	EDC3	100	70.817	ENSACIG00000017751	edc3	100	70.817	Amphilophus_citrinellus
ENSLACG00000014149	EDC3	99	61.154	ENSACIG00000005330	EDC3	99	61.154	Amphilophus_citrinellus
ENSLACG00000014149	EDC3	99	59.073	ENSAOCG00000009103	-	99	59.073	Amphiprion_ocellaris
ENSLACG00000014149	EDC3	100	71.984	ENSAOCG00000005431	edc3	100	71.984	Amphiprion_ocellaris
ENSLACG00000014149	EDC3	99	58.880	ENSAPEG00000007841	EDC3	99	58.880	Amphiprion_percula
ENSLACG00000014149	EDC3	100	71.984	ENSAPEG00000000968	edc3	100	71.984	Amphiprion_percula
ENSLACG00000014149	EDC3	100	61.731	ENSATEG00000004205	-	100	61.731	Anabas_testudineus
ENSLACG00000014149	EDC3	100	71.595	ENSATEG00000015505	edc3	100	71.595	Anabas_testudineus
ENSLACG00000014149	EDC3	90	79.610	ENSAPLG00000008957	EDC3	100	79.610	Anas_platyrhynchos
ENSLACG00000014149	EDC3	78	75.990	ENSACAG00000000460	-	100	75.990	Anolis_carolinensis
ENSLACG00000014149	EDC3	100	77.670	ENSANAG00000024078	EDC3	100	77.670	Aotus_nancymaae
ENSLACG00000014149	EDC3	99	60.348	ENSACLG00000018776	-	99	60.348	Astatotilapia_calliptera
ENSLACG00000014149	EDC3	100	70.233	ENSACLG00000007232	edc3	100	70.233	Astatotilapia_calliptera
ENSLACG00000014149	EDC3	100	72.222	ENSAMXG00000001589	edc3	100	72.222	Astyanax_mexicanus
ENSLACG00000014149	EDC3	100	77.670	ENSBTAG00000007308	EDC3	100	77.670	Bos_taurus
ENSLACG00000014149	EDC3	100	77.864	ENSCJAG00000017681	EDC3	100	77.864	Callithrix_jacchus
ENSLACG00000014149	EDC3	100	77.864	ENSCAFG00000017935	EDC3	100	77.864	Canis_familiaris
ENSLACG00000014149	EDC3	100	77.864	ENSCAFG00020003909	EDC3	100	77.864	Canis_lupus_dingo
ENSLACG00000014149	EDC3	100	77.670	ENSCHIG00000023658	EDC3	100	77.670	Capra_hircus
ENSLACG00000014149	EDC3	100	77.864	ENSTSYG00000004822	EDC3	100	77.864	Carlito_syrichta
ENSLACG00000014149	EDC3	100	76.893	ENSCPOG00000015595	EDC3	100	76.893	Cavia_porcellus
ENSLACG00000014149	EDC3	100	77.670	ENSCCAG00000021663	EDC3	100	77.670	Cebus_capucinus
ENSLACG00000014149	EDC3	100	77.864	ENSCATG00000037511	EDC3	100	77.864	Cercocebus_atys
ENSLACG00000014149	EDC3	100	76.893	ENSCLAG00000005700	EDC3	100	76.893	Chinchilla_lanigera
ENSLACG00000014149	EDC3	100	77.864	ENSCSAG00000014239	EDC3	100	77.864	Chlorocebus_sabaeus
ENSLACG00000014149	EDC3	100	79.223	ENSCPBG00000024239	EDC3	100	79.223	Chrysemys_picta_bellii
ENSLACG00000014149	EDC3	100	38.462	ENSCING00000022142	-	99	38.462	Ciona_intestinalis
ENSLACG00000014149	EDC3	100	77.864	ENSCANG00000028699	EDC3	100	77.864	Colobus_angolensis_palliatus
ENSLACG00000014149	EDC3	100	77.864	ENSCGRG00001013874	Edc3	100	77.864	Cricetulus_griseus_chok1gshd
ENSLACG00000014149	EDC3	100	77.864	ENSCGRG00000011885	Edc3	100	77.864	Cricetulus_griseus_crigri
ENSLACG00000014149	EDC3	99	70.760	ENSCSEG00000012996	edc3	99	70.760	Cynoglossus_semilaevis
ENSLACG00000014149	EDC3	99	71.930	ENSCVAG00000008023	edc3	100	71.790	Cyprinodon_variegatus
ENSLACG00000014149	EDC3	99	70.543	ENSDARG00000051931	edc3	99	70.543	Danio_rerio
ENSLACG00000014149	EDC3	100	68.260	ENSDNOG00000030661	EDC3	100	68.260	Dasypus_novemcinctus
ENSLACG00000014149	EDC3	64	87.037	ENSETEG00000002398	-	64	87.037	Echinops_telfairi
ENSLACG00000014149	EDC3	100	77.670	ENSEASG00005005071	EDC3	100	77.670	Equus_asinus_asinus
ENSLACG00000014149	EDC3	100	77.670	ENSECAG00000017994	EDC3	100	77.670	Equus_caballus
ENSLACG00000014149	EDC3	100	64.023	ENSELUG00000007607	EDC3	100	64.023	Esox_lucius
ENSLACG00000014149	EDC3	100	66.859	ENSELUG00000005794	edc3	100	66.859	Esox_lucius
ENSLACG00000014149	EDC3	100	77.670	ENSFCAG00000002014	EDC3	100	77.670	Felis_catus
ENSLACG00000014149	EDC3	98	75.842	ENSFALG00000004543	EDC3	96	75.842	Ficedula_albicollis
ENSLACG00000014149	EDC3	100	76.311	ENSFDAG00000012582	EDC3	100	76.311	Fukomys_damarensis
ENSLACG00000014149	EDC3	100	71.595	ENSFHEG00000009375	edc3	100	72.374	Fundulus_heteroclitus
ENSLACG00000014149	EDC3	100	69.052	ENSGMOG00000002715	edc3	100	69.052	Gadus_morhua
ENSLACG00000014149	EDC3	100	79.572	ENSGALG00000040181	EDC3	100	79.572	Gallus_gallus
ENSLACG00000014149	EDC3	100	69.650	ENSGAFG00000014433	edc3	100	69.650	Gambusia_affinis
ENSLACG00000014149	EDC3	99	58.157	ENSGACG00000014671	EDC3	99	58.126	Gasterosteus_aculeatus
ENSLACG00000014149	EDC3	100	70.039	ENSGACG00000009783	edc3	100	70.039	Gasterosteus_aculeatus
ENSLACG00000014149	EDC3	100	79.223	ENSGAGG00000023477	EDC3	100	79.223	Gopherus_agassizii
ENSLACG00000014149	EDC3	100	77.864	ENSGGOG00000003552	EDC3	100	77.864	Gorilla_gorilla
ENSLACG00000014149	EDC3	99	60.348	ENSHBUG00000020817	EDC3	99	60.348	Haplochromis_burtoni
ENSLACG00000014149	EDC3	100	70.233	ENSHBUG00000003635	edc3	100	70.233	Haplochromis_burtoni
ENSLACG00000014149	EDC3	100	70.349	ENSHCOG00000016834	edc3	100	70.543	Hippocampus_comes
ENSLACG00000014149	EDC3	99	71.622	ENSIPUG00000005695	edc3	100	71.622	Ictalurus_punctatus
ENSLACG00000014149	EDC3	100	77.476	ENSSTOG00000013936	EDC3	100	77.476	Ictidomys_tridecemlineatus
ENSLACG00000014149	EDC3	100	77.864	ENSJJAG00000008074	Edc3	100	77.864	Jaculus_jaculus
ENSLACG00000014149	EDC3	100	71.206	ENSKMAG00000001243	edc3	100	71.595	Kryptolebias_marmoratus
ENSLACG00000014149	EDC3	99	57.885	ENSKMAG00000001987	EDC3	99	57.885	Kryptolebias_marmoratus
ENSLACG00000014149	EDC3	100	70.623	ENSLBEG00000013435	edc3	99	71.206	Labrus_bergylta
ENSLACG00000014149	EDC3	99	61.079	ENSLBEG00000017984	EDC3	99	61.079	Labrus_bergylta
ENSLACG00000014149	EDC3	100	70.849	ENSLOCG00000014625	edc3	100	71.429	Lepisosteus_oculatus
ENSLACG00000014149	EDC3	100	77.864	ENSLAFG00000002992	EDC3	100	77.864	Loxodonta_africana
ENSLACG00000014149	EDC3	100	77.864	ENSMFAG00000043074	EDC3	100	77.864	Macaca_fascicularis
ENSLACG00000014149	EDC3	100	77.864	ENSMMUG00000011071	EDC3	100	77.864	Macaca_mulatta
ENSLACG00000014149	EDC3	100	77.864	ENSMNEG00000035316	EDC3	100	77.864	Macaca_nemestrina
ENSLACG00000014149	EDC3	100	77.864	ENSMLEG00000030372	EDC3	100	77.864	Mandrillus_leucophaeus
ENSLACG00000014149	EDC3	100	70.623	ENSMAMG00000000505	edc3	100	70.623	Mastacembelus_armatus
ENSLACG00000014149	EDC3	100	60.116	ENSMAMG00000005423	-	100	60.116	Mastacembelus_armatus
ENSLACG00000014149	EDC3	100	70.233	ENSMZEG00005004892	edc3	100	70.233	Maylandia_zebra
ENSLACG00000014149	EDC3	99	60.735	ENSMZEG00005005654	EDC3	99	60.735	Maylandia_zebra
ENSLACG00000014149	EDC3	100	79.377	ENSMGAG00000002617	EDC3	100	79.377	Meleagris_gallopavo
ENSLACG00000014149	EDC3	100	77.864	ENSMICG00000043190	EDC3	100	77.864	Microcebus_murinus
ENSLACG00000014149	EDC3	100	77.476	ENSMOCG00000016205	Edc3	100	77.476	Microtus_ochrogaster
ENSLACG00000014149	EDC3	99	70.760	ENSMMOG00000012278	edc3	99	70.955	Mola_mola
ENSLACG00000014149	EDC3	100	79.612	ENSMODG00000009442	EDC3	100	79.612	Monodelphis_domestica
ENSLACG00000014149	EDC3	100	71.790	ENSMALG00000008658	edc3	100	71.790	Monopterus_albus
ENSLACG00000014149	EDC3	100	77.670	MGP_CAROLIEiJ_G0032280	Edc3	100	77.670	Mus_caroli
ENSLACG00000014149	EDC3	100	77.282	ENSMUSG00000038957	Edc3	100	77.282	Mus_musculus
ENSLACG00000014149	EDC3	100	77.476	MGP_PahariEiJ_G0015146	Edc3	100	77.476	Mus_pahari
ENSLACG00000014149	EDC3	100	77.282	MGP_SPRETEiJ_G0033420	Edc3	100	77.282	Mus_spretus
ENSLACG00000014149	EDC3	100	77.864	ENSMPUG00000017293	EDC3	100	77.864	Mustela_putorius_furo
ENSLACG00000014149	EDC3	100	77.756	ENSMLUG00000016382	EDC3	100	77.756	Myotis_lucifugus
ENSLACG00000014149	EDC3	100	77.476	ENSNGAG00000010923	Edc3	100	77.476	Nannospalax_galili
ENSLACG00000014149	EDC3	99	61.122	ENSNBRG00000007881	EDC3	99	61.122	Neolamprologus_brichardi
ENSLACG00000014149	EDC3	100	69.650	ENSNBRG00000002434	edc3	100	69.650	Neolamprologus_brichardi
ENSLACG00000014149	EDC3	100	67.961	ENSNLEG00000014577	EDC3	100	67.961	Nomascus_leucogenys
ENSLACG00000014149	EDC3	100	79.572	ENSMEUG00000009077	EDC3	100	79.572	Notamacropus_eugenii
ENSLACG00000014149	EDC3	78	83.333	ENSOPRG00000009540	-	79	83.333	Ochotona_princeps
ENSLACG00000014149	EDC3	100	70.428	ENSONIG00000008434	edc3	100	70.428	Oreochromis_niloticus
ENSLACG00000014149	EDC3	99	60.878	ENSONIG00000002932	-	99	60.878	Oreochromis_niloticus
ENSLACG00000014149	EDC3	78	74.321	ENSOCUG00000017740	EDC3	86	74.321	Oryctolagus_cuniculus
ENSLACG00000014149	EDC3	100	69.844	ENSORLG00000004883	edc3	100	69.844	Oryzias_latipes
ENSLACG00000014149	EDC3	99	58.252	ENSORLG00000014399	-	98	58.252	Oryzias_latipes
ENSLACG00000014149	EDC3	99	58.252	ENSORLG00020019446	-	99	58.252	Oryzias_latipes_hni
ENSLACG00000014149	EDC3	100	69.844	ENSORLG00020012262	edc3	100	69.844	Oryzias_latipes_hni
ENSLACG00000014149	EDC3	100	69.844	ENSORLG00015005634	edc3	100	69.844	Oryzias_latipes_hsok
ENSLACG00000014149	EDC3	99	58.252	ENSORLG00015017635	-	95	58.252	Oryzias_latipes_hsok
ENSLACG00000014149	EDC3	99	57.663	ENSOMEG00000017354	EDC3	99	57.663	Oryzias_melastigma
ENSLACG00000014149	EDC3	100	71.012	ENSOMEG00000014026	edc3	100	71.012	Oryzias_melastigma
ENSLACG00000014149	EDC3	100	77.864	ENSOGAG00000014441	EDC3	100	77.864	Otolemur_garnettii
ENSLACG00000014149	EDC3	100	76.938	ENSOARG00000003476	EDC3	100	77.326	Ovis_aries
ENSLACG00000014149	EDC3	100	77.864	ENSPPAG00000040143	EDC3	100	77.864	Pan_paniscus
ENSLACG00000014149	EDC3	100	77.864	ENSPPRG00000006257	EDC3	100	77.864	Panthera_pardus
ENSLACG00000014149	EDC3	100	77.864	ENSPTIG00000017424	EDC3	100	77.864	Panthera_tigris_altaica
ENSLACG00000014149	EDC3	100	77.864	ENSPTRG00000007279	EDC3	100	77.864	Pan_troglodytes
ENSLACG00000014149	EDC3	100	77.864	ENSPANG00000015997	EDC3	100	77.864	Papio_anubis
ENSLACG00000014149	EDC3	100	69.038	ENSPKIG00000004416	edc3	100	70.192	Paramormyrops_kingsleyae
ENSLACG00000014149	EDC3	99	68.279	ENSPKIG00000019810	EDC3	99	68.279	Paramormyrops_kingsleyae
ENSLACG00000014149	EDC3	100	73.398	ENSPSIG00000008474	EDC3	100	73.398	Pelodiscus_sinensis
ENSLACG00000014149	EDC3	100	69.380	ENSPMGG00000007223	edc3	100	69.380	Periophthalmus_magnuspinnatus
ENSLACG00000014149	EDC3	100	77.670	ENSPEMG00000015260	Edc3	100	77.670	Peromyscus_maniculatus_bairdii
ENSLACG00000014149	EDC3	100	78.599	ENSPCIG00000006276	EDC3	70	78.599	Phascolarctos_cinereus
ENSLACG00000014149	EDC3	100	71.206	ENSPFOG00000012204	edc3	100	71.206	Poecilia_formosa
ENSLACG00000014149	EDC3	100	71.206	ENSPLAG00000014420	edc3	100	71.206	Poecilia_latipinna
ENSLACG00000014149	EDC3	100	71.206	ENSPMEG00000023289	edc3	100	71.206	Poecilia_mexicana
ENSLACG00000014149	EDC3	100	70.428	ENSPREG00000016022	edc3	100	70.428	Poecilia_reticulata
ENSLACG00000014149	EDC3	100	76.699	ENSPPYG00000006642	EDC3	100	76.699	Pongo_abelii
ENSLACG00000014149	EDC3	87	84.478	ENSPCAG00000002802	EDC3	88	84.478	Procavia_capensis
ENSLACG00000014149	EDC3	100	77.670	ENSPCOG00000013364	EDC3	100	77.670	Propithecus_coquereli
ENSLACG00000014149	EDC3	100	77.756	ENSPVAG00000014733	EDC3	100	77.756	Pteropus_vampyrus
ENSLACG00000014149	EDC3	99	60.348	ENSPNYG00000009669	EDC3	99	60.348	Pundamilia_nyererei
ENSLACG00000014149	EDC3	100	70.233	ENSPNYG00000021797	edc3	100	70.233	Pundamilia_nyererei
ENSLACG00000014149	EDC3	100	72.340	ENSPNAG00000019657	edc3	100	72.340	Pygocentrus_nattereri
ENSLACG00000014149	EDC3	99	77.734	ENSRNOG00000019579	Edc3	99	77.734	Rattus_norvegicus
ENSLACG00000014149	EDC3	100	77.864	ENSRBIG00000019488	EDC3	100	77.864	Rhinopithecus_bieti
ENSLACG00000014149	EDC3	100	77.864	ENSRROG00000034959	EDC3	100	77.864	Rhinopithecus_roxellana
ENSLACG00000014149	EDC3	100	77.282	ENSSBOG00000004896	EDC3	100	77.282	Saimiri_boliviensis_boliviensis
ENSLACG00000014149	EDC3	96	78.990	ENSSHAG00000015075	EDC3	95	78.990	Sarcophilus_harrisii
ENSLACG00000014149	EDC3	99	71.373	ENSSFOG00015016939	edc3	99	71.869	Scleropages_formosus
ENSLACG00000014149	EDC3	100	63.178	ENSSFOG00015002439	edc3	100	67.115	Scleropages_formosus
ENSLACG00000014149	EDC3	100	70.623	ENSSMAG00000010695	edc3	100	71.012	Scophthalmus_maximus
ENSLACG00000014149	EDC3	99	59.465	ENSSMAG00000010176	-	99	59.465	Scophthalmus_maximus
ENSLACG00000014149	EDC3	99	61.776	ENSSDUG00000007671	EDC3	99	61.776	Seriola_dumerili
ENSLACG00000014149	EDC3	100	71.595	ENSSDUG00000021844	edc3	100	72.179	Seriola_dumerili
ENSLACG00000014149	EDC3	100	71.595	ENSSLDG00000022046	edc3	100	72.179	Seriola_lalandi_dorsalis
ENSLACG00000014149	EDC3	81	87.097	ENSSARG00000003907	EDC3	80	87.097	Sorex_araneus
ENSLACG00000014149	EDC3	100	78.058	ENSSPUG00000008232	EDC3	100	78.058	Sphenodon_punctatus
ENSLACG00000014149	EDC3	100	72.374	ENSSPAG00000010009	edc3	100	72.374	Stegastes_partitus
ENSLACG00000014149	EDC3	99	60.577	ENSSPAG00000020327	EDC3	99	59.768	Stegastes_partitus
ENSLACG00000014149	EDC3	100	77.282	ENSSSCG00000001903	EDC3	100	77.282	Sus_scrofa
ENSLACG00000014149	EDC3	100	79.572	ENSTGUG00000004007	EDC3	100	79.572	Taeniopygia_guttata
ENSLACG00000014149	EDC3	100	71.012	ENSTRUG00000017078	edc3	100	71.012	Takifugu_rubripes
ENSLACG00000014149	EDC3	100	70.349	ENSTNIG00000016047	edc3	100	70.349	Tetraodon_nigroviridis
ENSLACG00000014149	EDC3	100	77.626	ENSTTRG00000007990	EDC3	100	77.626	Tursiops_truncatus
ENSLACG00000014149	EDC3	100	77.670	ENSUAMG00000026710	-	100	77.670	Ursus_americanus
ENSLACG00000014149	EDC3	100	77.670	ENSUMAG00000005006	EDC3	96	77.670	Ursus_maritimus
ENSLACG00000014149	EDC3	78	73.121	ENSVPAG00000003499	-	79	73.121	Vicugna_pacos
ENSLACG00000014149	EDC3	100	77.864	ENSVVUG00000018601	EDC3	100	77.864	Vulpes_vulpes
ENSLACG00000014149	EDC3	67	81.322	ENSXETG00000010622	edc3	99	82.759	Xenopus_tropicalis
ENSLACG00000014149	EDC3	100	70.428	ENSXMAG00000007377	edc3	100	70.428	Xiphophorus_maculatus