EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000014243 (Gene tree)
Gene ID: 102363582
Gene Symbol: SHQ1
Alias: FLJ10539|Shq1p
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 103565 bases
Position: chrJH127051.1:990086-1093650
Accession: 102363582
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000016170	SHQ1	PF04925.15	1.6e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000016282	SHQ1-201	2772	XM_005998958	ENSLACP00000016170	663 (aa)	XP_005999020	H3B2P9

Gene Model

Click here to download ENSLACG00000014243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000014243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000014243	SHQ1	86	60.279	ENSG00000144736	SHQ1	100	73.874	Homo_sapiens
ENSLACG00000014243	SHQ1	66	62.812	ENSAPOG00000000397	shq1	92	55.026	Acanthochromis_polyacanthus
ENSLACG00000014243	SHQ1	86	60.908	ENSAMEG00000015140	SHQ1	98	60.733	Ailuropoda_melanoleuca
ENSLACG00000014243	SHQ1	66	64.679	ENSACIG00000021249	shq1	71	64.908	Amphilophus_citrinellus
ENSLACG00000014243	SHQ1	65	65.376	ENSAOCG00000023311	shq1	92	55.442	Amphiprion_ocellaris
ENSLACG00000014243	SHQ1	65	65.148	ENSAPEG00000021686	shq1	92	55.272	Amphiprion_percula
ENSLACG00000014243	SHQ1	65	64.989	ENSATEG00000008475	shq1	72	64.334	Anabas_testudineus
ENSLACG00000014243	SHQ1	67	66.219	ENSAPLG00000013926	SHQ1	88	66.071	Anas_platyrhynchos
ENSLACG00000014243	SHQ1	64	67.757	ENSACAG00000014809	SHQ1	89	57.003	Anolis_carolinensis
ENSLACG00000014243	SHQ1	86	59.233	ENSANAG00000029241	SHQ1	98	59.059	Aotus_nancymaae
ENSLACG00000014243	SHQ1	86	45.122	ENSANAG00000030500	-	99	44.251	Aotus_nancymaae
ENSLACG00000014243	SHQ1	66	63.039	ENSACLG00000023077	shq1	73	59.149	Astatotilapia_calliptera
ENSLACG00000014243	SHQ1	65	57.541	ENSAMXG00000043822	shq1	75	57.753	Astyanax_mexicanus
ENSLACG00000014243	SHQ1	87	59.691	ENSBTAG00000005436	SHQ1	99	57.778	Bos_taurus
ENSLACG00000014243	SHQ1	65	31.663	WBGene00021655	Y48A5A.1	97	31.828	Caenorhabditis_elegans
ENSLACG00000014243	SHQ1	86	57.976	ENSCJAG00000015131	SHQ1	98	59.441	Callithrix_jacchus
ENSLACG00000014243	SHQ1	85	58.246	ENSCAFG00000006434	SHQ1	97	59.298	Canis_familiaris
ENSLACG00000014243	SHQ1	85	58.421	ENSCAFG00020016743	SHQ1	97	59.474	Canis_lupus_dingo
ENSLACG00000014243	SHQ1	88	60.034	ENSCHIG00000012271	SHQ1	90	57.778	Capra_hircus
ENSLACG00000014243	SHQ1	86	55.130	ENSTSYG00000014439	SHQ1	98	54.957	Carlito_syrichta
ENSLACG00000014243	SHQ1	80	50.943	ENSCAPG00000009343	SHQ1	96	73.377	Cavia_aperea
ENSLACG00000014243	SHQ1	87	56.336	ENSCPOG00000011443	SHQ1	99	56.336	Cavia_porcellus
ENSLACG00000014243	SHQ1	86	52.091	ENSCCAG00000027080	SHQ1	98	51.916	Cebus_capucinus
ENSLACG00000014243	SHQ1	86	46.367	ENSCCAG00000036087	-	98	45.581	Cebus_capucinus
ENSLACG00000014243	SHQ1	86	60.279	ENSCATG00000041238	SHQ1	98	60.279	Cercocebus_atys
ENSLACG00000014243	SHQ1	85	57.848	ENSCLAG00000004206	SHQ1	77	66.890	Chinchilla_lanigera
ENSLACG00000014243	SHQ1	73	57.732	ENSCSAG00000011514	SHQ1	98	57.732	Chlorocebus_sabaeus
ENSLACG00000014243	SHQ1	92	60.423	ENSCPBG00000006441	SHQ1	98	60.423	Chrysemys_picta_bellii
ENSLACG00000014243	SHQ1	60	42.500	ENSCING00000008013	-	96	40.625	Ciona_intestinalis
ENSLACG00000014243	SHQ1	62	40.767	ENSCSAVG00000002332	-	98	40.682	Ciona_savignyi
ENSLACG00000014243	SHQ1	86	60.801	ENSCANG00000039295	SHQ1	99	60.105	Colobus_angolensis_palliatus
ENSLACG00000014243	SHQ1	86	54.905	ENSCGRG00001012583	Shq1	80	65.044	Cricetulus_griseus_chok1gshd
ENSLACG00000014243	SHQ1	86	54.905	ENSCGRG00000009849	Shq1	80	65.044	Cricetulus_griseus_crigri
ENSLACG00000014243	SHQ1	67	62.556	ENSCSEG00000007829	shq1	69	64.828	Cynoglossus_semilaevis
ENSLACG00000014243	SHQ1	66	61.048	ENSCVAG00000020049	shq1	74	61.503	Cyprinodon_variegatus
ENSLACG00000014243	SHQ1	66	62.785	ENSDARG00000058522	shq1	73	62.870	Danio_rerio
ENSLACG00000014243	SHQ1	88	59.253	ENSDNOG00000033937	SHQ1	100	59.184	Dasypus_novemcinctus
ENSLACG00000014243	SHQ1	87	53.675	ENSETEG00000005766	SHQ1	99	53.541	Echinops_telfairi
ENSLACG00000014243	SHQ1	56	49.062	ENSEBUG00000005445	shq1	81	48.895	Eptatretus_burgeri
ENSLACG00000014243	SHQ1	86	60.243	ENSEASG00005002237	SHQ1	98	60.243	Equus_asinus_asinus
ENSLACG00000014243	SHQ1	86	60.384	ENSECAG00000015673	SHQ1	95	59.511	Equus_caballus
ENSLACG00000014243	SHQ1	86	60.000	ENSEEUG00000010568	SHQ1	98	60.000	Erinaceus_europaeus
ENSLACG00000014243	SHQ1	62	65.217	ENSELUG00000003476	shq1	81	62.532	Esox_lucius
ENSLACG00000014243	SHQ1	86	58.741	ENSFCAG00000012781	SHQ1	98	58.741	Felis_catus
ENSLACG00000014243	SHQ1	91	56.373	ENSFALG00000013428	SHQ1	97	56.465	Ficedula_albicollis
ENSLACG00000014243	SHQ1	71	63.889	ENSFDAG00000005595	SHQ1	94	54.844	Fukomys_damarensis
ENSLACG00000014243	SHQ1	66	61.224	ENSFHEG00000017552	shq1	74	61.224	Fundulus_heteroclitus
ENSLACG00000014243	SHQ1	60	60.453	ENSGMOG00000007350	shq1	100	60.705	Gadus_morhua
ENSLACG00000014243	SHQ1	91	57.447	ENSGALG00000007798	SHQ1	97	57.447	Gallus_gallus
ENSLACG00000014243	SHQ1	60	61.713	ENSGACG00000011797	shq1	100	61.965	Gasterosteus_aculeatus
ENSLACG00000014243	SHQ1	86	59.756	ENSGGOG00000034818	SHQ1	98	59.756	Gorilla_gorilla
ENSLACG00000014243	SHQ1	66	63.039	ENSHBUG00000010857	shq1	72	63.039	Haplochromis_burtoni
ENSLACG00000014243	SHQ1	89	54.983	ENSHGLG00000003637	SHQ1	92	56.000	Heterocephalus_glaber_female
ENSLACG00000014243	SHQ1	89	55.167	ENSHGLG00100011957	SHQ1	92	55.184	Heterocephalus_glaber_male
ENSLACG00000014243	SHQ1	85	52.797	ENSHCOG00000010799	shq1	73	62.500	Hippocampus_comes
ENSLACG00000014243	SHQ1	66	59.773	ENSIPUG00000001247	shq1	74	59.773	Ictalurus_punctatus
ENSLACG00000014243	SHQ1	65	66.129	ENSSTOG00000010043	SHQ1	79	65.899	Ictidomys_tridecemlineatus
ENSLACG00000014243	SHQ1	85	58.007	ENSJJAG00000017611	Shq1	78	67.494	Jaculus_jaculus
ENSLACG00000014243	SHQ1	67	64.206	ENSKMAG00000004457	shq1	74	63.839	Kryptolebias_marmoratus
ENSLACG00000014243	SHQ1	92	57.026	ENSLOCG00000009970	shq1	98	58.609	Lepisosteus_oculatus
ENSLACG00000014243	SHQ1	86	45.550	ENSMFAG00000037396	-	97	44.834	Macaca_fascicularis
ENSLACG00000014243	SHQ1	86	60.453	ENSMFAG00000039148	SHQ1	98	60.453	Macaca_fascicularis
ENSLACG00000014243	SHQ1	86	45.375	ENSMMUG00000021761	-	97	44.658	Macaca_mulatta
ENSLACG00000014243	SHQ1	79	59.316	ENSMMUG00000009571	SHQ1	94	59.506	Macaca_mulatta
ENSLACG00000014243	SHQ1	86	60.453	ENSMNEG00000032667	SHQ1	98	60.453	Macaca_nemestrina
ENSLACG00000014243	SHQ1	86	60.105	ENSMLEG00000038493	SHQ1	98	59.233	Mandrillus_leucophaeus
ENSLACG00000014243	SHQ1	66	63.205	ENSMAMG00000023432	shq1	67	62.980	Mastacembelus_armatus
ENSLACG00000014243	SHQ1	66	63.039	ENSMZEG00005008649	shq1	72	63.039	Maylandia_zebra
ENSLACG00000014243	SHQ1	86	59.227	ENSMGAG00000009640	SHQ1	92	58.566	Meleagris_gallopavo
ENSLACG00000014243	SHQ1	87	56.477	ENSMAUG00000022030	Shq1	98	64.659	Mesocricetus_auratus
ENSLACG00000014243	SHQ1	86	58.333	ENSMICG00000009224	SHQ1	98	57.639	Microcebus_murinus
ENSLACG00000014243	SHQ1	86	54.261	ENSMOCG00000017836	Shq1	97	63.855	Microtus_ochrogaster
ENSLACG00000014243	SHQ1	65	61.982	ENSMMOG00000010569	shq1	73	62.442	Mola_mola
ENSLACG00000014243	SHQ1	84	56.584	ENSMODG00000003926	SHQ1	79	65.455	Monodelphis_domestica
ENSLACG00000014243	SHQ1	66	64.172	ENSMALG00000008870	shq1	72	63.719	Monopterus_albus
ENSLACG00000014243	SHQ1	87	55.385	MGP_CAROLIEiJ_G0028689	Shq1	78	66.213	Mus_caroli
ENSLACG00000014243	SHQ1	87	55.385	ENSMUSG00000035378	Shq1	99	65.060	Mus_musculus
ENSLACG00000014243	SHQ1	87	56.752	MGP_PahariEiJ_G0022440	Shq1	99	65.863	Mus_pahari
ENSLACG00000014243	SHQ1	87	55.366	MGP_SPRETEiJ_G0029717	Shq1	100	65.060	Mus_spretus
ENSLACG00000014243	SHQ1	85	60.702	ENSMPUG00000017006	SHQ1	95	59.649	Mustela_putorius_furo
ENSLACG00000014243	SHQ1	79	55.453	ENSMLUG00000013539	SHQ1	97	55.083	Myotis_lucifugus
ENSLACG00000014243	SHQ1	85	52.557	ENSNGAG00000023317	Shq1	98	51.761	Nannospalax_galili
ENSLACG00000014243	SHQ1	52	59.943	ENSNBRG00000024004	shq1	67	59.943	Neolamprologus_brichardi
ENSLACG00000014243	SHQ1	86	60.976	ENSNLEG00000002731	SHQ1	98	60.279	Nomascus_leucogenys
ENSLACG00000014243	SHQ1	65	46.083	ENSMEUG00000009350	-	80	46.083	Notamacropus_eugenii
ENSLACG00000014243	SHQ1	86	55.439	ENSODEG00000009192	SHQ1	57	64.490	Octodon_degus
ENSLACG00000014243	SHQ1	66	63.492	ENSONIG00000020264	shq1	72	63.492	Oreochromis_niloticus
ENSLACG00000014243	SHQ1	86	57.241	ENSOCUG00000016695	SHQ1	97	57.417	Oryctolagus_cuniculus
ENSLACG00000014243	SHQ1	65	62.500	ENSORLG00000023538	shq1	78	62.329	Oryzias_latipes
ENSLACG00000014243	SHQ1	65	62.731	ENSORLG00020003697	shq1	78	62.557	Oryzias_latipes_hni
ENSLACG00000014243	SHQ1	65	62.269	ENSORLG00015021040	shq1	79	61.659	Oryzias_latipes_hsok
ENSLACG00000014243	SHQ1	65	62.269	ENSOMEG00000001225	shq1	79	60.674	Oryzias_melastigma
ENSLACG00000014243	SHQ1	86	59.028	ENSOGAG00000003898	SHQ1	99	57.292	Otolemur_garnettii
ENSLACG00000014243	SHQ1	87	59.455	ENSOARG00000009547	SHQ1	99	57.167	Ovis_aries
ENSLACG00000014243	SHQ1	86	45.819	ENSPPAG00000043263	-	98	45.645	Pan_paniscus
ENSLACG00000014243	SHQ1	86	60.105	ENSPPAG00000027714	SHQ1	98	60.279	Pan_paniscus
ENSLACG00000014243	SHQ1	86	58.947	ENSPPRG00000004769	SHQ1	98	58.741	Panthera_pardus
ENSLACG00000014243	SHQ1	86	56.870	ENSPTIG00000011478	SHQ1	98	56.672	Panthera_tigris_altaica
ENSLACG00000014243	SHQ1	86	45.296	ENSPTRG00000048303	-	98	45.122	Pan_troglodytes
ENSLACG00000014243	SHQ1	86	60.105	ENSPTRG00000015106	SHQ1	98	60.279	Pan_troglodytes
ENSLACG00000014243	SHQ1	86	59.756	ENSPANG00000002881	SHQ1	98	60.627	Papio_anubis
ENSLACG00000014243	SHQ1	92	60.229	ENSPSIG00000005536	SHQ1	98	59.380	Pelodiscus_sinensis
ENSLACG00000014243	SHQ1	70	56.745	ENSPMGG00000008838	shq1	75	57.173	Periophthalmus_magnuspinnatus
ENSLACG00000014243	SHQ1	87	56.055	ENSPEMG00000000251	Shq1	98	64.898	Peromyscus_maniculatus_bairdii
ENSLACG00000014243	SHQ1	65	59.729	ENSPMAG00000005372	shq1	98	59.729	Petromyzon_marinus
ENSLACG00000014243	SHQ1	66	59.637	ENSPFOG00000003118	shq1	81	59.375	Poecilia_formosa
ENSLACG00000014243	SHQ1	52	57.143	ENSPMEG00000011076	shq1	77	57.143	Poecilia_mexicana
ENSLACG00000014243	SHQ1	55	59.730	ENSPREG00000000591	shq1	74	59.796	Poecilia_reticulata
ENSLACG00000014243	SHQ1	86	59.826	ENSPPYG00000013717	SHQ1	98	59.304	Pongo_abelii
ENSLACG00000014243	SHQ1	84	60.847	ENSPCAG00000009035	SHQ1	98	60.522	Procavia_capensis
ENSLACG00000014243	SHQ1	86	58.031	ENSPCOG00000008415	SHQ1	98	58.824	Propithecus_coquereli
ENSLACG00000014243	SHQ1	87	59.138	ENSPVAG00000017392	SHQ1	99	59.138	Pteropus_vampyrus
ENSLACG00000014243	SHQ1	66	63.039	ENSPNYG00000003878	shq1	71	63.039	Pundamilia_nyererei
ENSLACG00000014243	SHQ1	65	61.521	ENSPNAG00000026840	shq1	71	61.086	Pygocentrus_nattereri
ENSLACG00000014243	SHQ1	87	53.507	ENSRNOG00000005433	Shq1	73	66.893	Rattus_norvegicus
ENSLACG00000014243	SHQ1	86	58.435	ENSRBIG00000026280	SHQ1	99	57.739	Rhinopithecus_bieti
ENSLACG00000014243	SHQ1	86	60.801	ENSRROG00000034126	SHQ1	99	60.105	Rhinopithecus_roxellana
ENSLACG00000014243	SHQ1	86	52.972	ENSSBOG00000021038	SHQ1	97	52.797	Saimiri_boliviensis_boliviensis
ENSLACG00000014243	SHQ1	71	63.368	ENSSHAG00000015077	SHQ1	80	64.551	Sarcophilus_harrisii
ENSLACG00000014243	SHQ1	65	66.207	ENSSFOG00015016241	shq1	78	66.207	Scleropages_formosus
ENSLACG00000014243	SHQ1	86	53.276	ENSSMAG00000016151	shq1	99	51.447	Scophthalmus_maximus
ENSLACG00000014243	SHQ1	65	63.908	ENSSDUG00000011986	shq1	72	62.749	Seriola_dumerili
ENSLACG00000014243	SHQ1	63	64.337	ENSSLDG00000013908	shq1	72	63.596	Seriola_lalandi_dorsalis
ENSLACG00000014243	SHQ1	87	50.346	ENSSARG00000007119	SHQ1	99	49.481	Sorex_araneus
ENSLACG00000014243	SHQ1	78	53.537	ENSSPUG00000011526	-	94	54.406	Sphenodon_punctatus
ENSLACG00000014243	SHQ1	87	59.253	ENSSSCG00000011518	SHQ1	99	57.143	Sus_scrofa
ENSLACG00000014243	SHQ1	86	56.454	ENSTGUG00000009933	SHQ1	98	56.701	Taeniopygia_guttata
ENSLACG00000014243	SHQ1	62	58.894	ENSTRUG00000009446	shq1	74	58.864	Takifugu_rubripes
ENSLACG00000014243	SHQ1	62	58.894	ENSTNIG00000007354	shq1	97	57.333	Tetraodon_nigroviridis
ENSLACG00000014243	SHQ1	60	72.340	ENSTBEG00000011295	SHQ1	79	72.340	Tupaia_belangeri
ENSLACG00000014243	SHQ1	86	58.813	ENSTTRG00000005320	SHQ1	98	58.115	Tursiops_truncatus
ENSLACG00000014243	SHQ1	86	60.209	ENSUMAG00000024031	SHQ1	97	58.813	Ursus_maritimus
ENSLACG00000014243	SHQ1	66	57.788	ENSVPAG00000004880	SHQ1	97	51.613	Vicugna_pacos
ENSLACG00000014243	SHQ1	86	57.986	ENSVVUG00000013906	SHQ1	98	59.201	Vulpes_vulpes
ENSLACG00000014243	SHQ1	67	66.213	ENSXETG00000032215	shq1	72	65.914	Xenopus_tropicalis