EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000014585 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 29286 bases
Position: chrJH126766.1:1055836-1085121
Accession: 102355111
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000016552	TRM	PF02005.16	3.7e-108	1	1
ENSLACP00000016552	Met_10	PF02475.16	9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000016666	TRMT1-201	1815	XM_005994333	ENSLACP00000016552	605 (aa)	-	H3B3T1

Gene Model

Click here to download ENSLACG00000014585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000014585's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000014585	TRMT1	94	57.315	ENSG00000104907	TRMT1	100	60.733	Homo_sapiens
ENSLACG00000014585	TRMT1	99	55.412	ENSAMEG00000012598	TRMT1	86	57.363	Ailuropoda_melanoleuca
ENSLACG00000014585	TRMT1	94	58.319	ENSACIG00000018680	trmt1	88	58.421	Amphilophus_citrinellus
ENSLACG00000014585	TRMT1	95	60.481	ENSAOCG00000006781	trmt1	86	60.590	Amphiprion_ocellaris
ENSLACG00000014585	TRMT1	95	60.481	ENSAPEG00000007712	trmt1	86	60.590	Amphiprion_percula
ENSLACG00000014585	TRMT1	94	62.565	ENSATEG00000001872	trmt1	84	62.676	Anabas_testudineus
ENSLACG00000014585	TRMT1	95	58.834	ENSACAG00000003825	TRMT1	93	59.028	Anolis_carolinensis
ENSLACG00000014585	TRMT1	94	55.938	ENSANAG00000023016	TRMT1	92	55.938	Aotus_nancymaae
ENSLACG00000014585	TRMT1	94	58.669	ENSACLG00000010073	trmt1	92	58.803	Astatotilapia_calliptera
ENSLACG00000014585	TRMT1	95	61.368	ENSAMXG00000012026	trmt1	86	61.698	Astyanax_mexicanus
ENSLACG00000014585	TRMT1	99	55.882	ENSBTAG00000019325	TRMT1	81	57.612	Bos_taurus
ENSLACG00000014585	TRMT1	85	37.311	WBGene00006613	trm-1	94	37.311	Caenorhabditis_elegans
ENSLACG00000014585	TRMT1	99	53.846	ENSCJAG00000004566	TRMT1	89	55.137	Callithrix_jacchus
ENSLACG00000014585	TRMT1	99	56.129	ENSCAFG00000017070	TRMT1	90	57.949	Canis_familiaris
ENSLACG00000014585	TRMT1	99	56.220	ENSCAFG00020005397	TRMT1	89	57.290	Canis_lupus_dingo
ENSLACG00000014585	TRMT1	99	55.863	ENSCHIG00000013569	TRMT1	86	57.686	Capra_hircus
ENSLACG00000014585	TRMT1	96	53.859	ENSTSYG00000003207	TRMT1	88	54.389	Carlito_syrichta
ENSLACG00000014585	TRMT1	86	53.846	ENSCAPG00000003355	TRMT1	94	53.933	Cavia_aperea
ENSLACG00000014585	TRMT1	93	56.747	ENSCPOG00000011754	TRMT1	87	56.822	Cavia_porcellus
ENSLACG00000014585	TRMT1	99	54.309	ENSCCAG00000022263	TRMT1	93	55.938	Cebus_capucinus
ENSLACG00000014585	TRMT1	73	48.791	ENSCATG00000038220	-	81	48.791	Cercocebus_atys
ENSLACG00000014585	TRMT1	94	58.520	ENSCATG00000039850	TRMT1	87	58.520	Cercocebus_atys
ENSLACG00000014585	TRMT1	99	54.620	ENSCLAG00000015295	TRMT1	89	56.294	Chinchilla_lanigera
ENSLACG00000014585	TRMT1	78	59.375	ENSCSAG00000006500	TRMT1	90	59.375	Chlorocebus_sabaeus
ENSLACG00000014585	TRMT1	97	61.775	ENSCPBG00000023866	TRMT1	85	63.717	Chrysemys_picta_bellii
ENSLACG00000014585	TRMT1	89	41.026	ENSCING00000002884	-	96	41.026	Ciona_intestinalis
ENSLACG00000014585	TRMT1	89	42.623	ENSCSAVG00000010927	-	99	41.682	Ciona_savignyi
ENSLACG00000014585	TRMT1	93	49.481	ENSCANG00000040631	TRMT1	87	49.231	Colobus_angolensis_palliatus
ENSLACG00000014585	TRMT1	90	46.306	ENSCANG00000031650	-	86	46.306	Colobus_angolensis_palliatus
ENSLACG00000014585	TRMT1	93	56.894	ENSCGRG00001022594	Trmt1	87	57.068	Cricetulus_griseus_chok1gshd
ENSLACG00000014585	TRMT1	93	56.894	ENSCGRG00000017732	Trmt1	86	57.068	Cricetulus_griseus_crigri
ENSLACG00000014585	TRMT1	94	61.872	ENSCSEG00000001643	trmt1	84	62.403	Cynoglossus_semilaevis
ENSLACG00000014585	TRMT1	96	60.377	ENSCVAG00000011886	trmt1	86	61.014	Cyprinodon_variegatus
ENSLACG00000014585	TRMT1	94	59.348	ENSDARG00000010978	trmt1	86	59.655	Danio_rerio
ENSLACG00000014585	TRMT1	88	42.676	ENSDNOG00000048240	-	90	43.097	Dasypus_novemcinctus
ENSLACG00000014585	TRMT1	98	55.611	ENSDORG00000014298	Trmt1	89	56.229	Dipodomys_ordii
ENSLACG00000014585	TRMT1	89	41.379	FBgn0032430	CG6388	93	41.016	Drosophila_melanogaster
ENSLACG00000014585	TRMT1	85	45.736	ENSEBUG00000003449	trmt1	76	45.962	Eptatretus_burgeri
ENSLACG00000014585	TRMT1	96	57.647	ENSEASG00005004050	TRMT1	90	58.478	Equus_asinus_asinus
ENSLACG00000014585	TRMT1	96	57.815	ENSECAG00000016149	TRMT1	90	58.651	Equus_caballus
ENSLACG00000014585	TRMT1	54	55.378	ENSEEUG00000014102	-	84	55.378	Erinaceus_europaeus
ENSLACG00000014585	TRMT1	94	58.864	ENSELUG00000021659	trmt1	86	58.966	Esox_lucius
ENSLACG00000014585	TRMT1	99	56.322	ENSFCAG00000000483	TRMT1	87	58.188	Felis_catus
ENSLACG00000014585	TRMT1	98	55.556	ENSFDAG00000007386	TRMT1	86	57.366	Fukomys_damarensis
ENSLACG00000014585	TRMT1	85	61.420	ENSFHEG00000012865	trmt1	86	61.228	Fundulus_heteroclitus
ENSLACG00000014585	TRMT1	94	52.548	ENSGMOG00000006564	trmt1	99	53.147	Gadus_morhua
ENSLACG00000014585	TRMT1	94	62.304	ENSGAFG00000011862	trmt1	89	62.653	Gambusia_affinis
ENSLACG00000014585	TRMT1	94	57.592	ENSGACG00000000227	trmt1	93	57.592	Gasterosteus_aculeatus
ENSLACG00000014585	TRMT1	97	62.222	ENSGAGG00000016432	TRMT1	84	63.121	Gopherus_agassizii
ENSLACG00000014585	TRMT1	94	57.315	ENSGGOG00000014007	TRMT1	87	57.315	Gorilla_gorilla
ENSLACG00000014585	TRMT1	92	56.406	ENSHBUG00000008821	trmt1	93	56.406	Haplochromis_burtoni
ENSLACG00000014585	TRMT1	96	56.367	ENSHGLG00000015972	TRMT1	87	57.243	Heterocephalus_glaber_female
ENSLACG00000014585	TRMT1	96	52.542	ENSHGLG00100018112	TRMT1	87	53.310	Heterocephalus_glaber_male
ENSLACG00000014585	TRMT1	93	60.664	ENSHCOG00000009447	trmt1	88	60.664	Hippocampus_comes
ENSLACG00000014585	TRMT1	95	59.052	ENSIPUG00000002899	trmt1	85	59.727	Ictalurus_punctatus
ENSLACG00000014585	TRMT1	98	56.529	ENSSTOG00000012531	TRMT1	87	57.941	Ictidomys_tridecemlineatus
ENSLACG00000014585	TRMT1	93	57.019	ENSJJAG00000017154	Trmt1	88	56.995	Jaculus_jaculus
ENSLACG00000014585	TRMT1	94	61.739	ENSKMAG00000011809	trmt1	96	61.121	Kryptolebias_marmoratus
ENSLACG00000014585	TRMT1	95	60.417	ENSLBEG00000012703	trmt1	85	60.522	Labrus_bergylta
ENSLACG00000014585	TRMT1	94	53.565	ENSLOCG00000006479	trmt1	98	53.565	Lepisosteus_oculatus
ENSLACG00000014585	TRMT1	96	57.119	ENSLAFG00000014072	TRMT1	88	57.831	Loxodonta_africana
ENSLACG00000014585	TRMT1	94	58.520	ENSMFAG00000033143	TRMT1	87	58.520	Macaca_fascicularis
ENSLACG00000014585	TRMT1	93	54.609	ENSMMUG00000001167	TRMT1	88	54.296	Macaca_mulatta
ENSLACG00000014585	TRMT1	94	58.348	ENSMNEG00000037867	TRMT1	87	58.348	Macaca_nemestrina
ENSLACG00000014585	TRMT1	95	58.120	ENSMLEG00000016142	TRMT1	88	58.348	Mandrillus_leucophaeus
ENSLACG00000014585	TRMT1	95	61.140	ENSMAMG00000004357	trmt1	86	61.246	Mastacembelus_armatus
ENSLACG00000014585	TRMT1	95	58.377	ENSMZEG00005014510	trmt1	85	59.155	Maylandia_zebra
ENSLACG00000014585	TRMT1	94	56.971	ENSMAUG00000011134	Trmt1	87	56.971	Mesocricetus_auratus
ENSLACG00000014585	TRMT1	94	57.071	ENSMICG00000000793	TRMT1	89	57.071	Microcebus_murinus
ENSLACG00000014585	TRMT1	93	57.812	ENSMOCG00000015895	Trmt1	86	57.812	Microtus_ochrogaster
ENSLACG00000014585	TRMT1	95	59.863	ENSMMOG00000011097	trmt1	93	60.243	Mola_mola
ENSLACG00000014585	TRMT1	97	60.307	ENSMODG00000011619	TRMT1	93	60.771	Monodelphis_domestica
ENSLACG00000014585	TRMT1	93	58.844	MGP_CAROLIEiJ_G0031304	Trmt1	87	58.844	Mus_caroli
ENSLACG00000014585	TRMT1	93	59.019	ENSMUSG00000001909	Trmt1	87	59.019	Mus_musculus
ENSLACG00000014585	TRMT1	93	58.844	MGP_SPRETEiJ_G0032422	Trmt1	87	58.844	Mus_spretus
ENSLACG00000014585	TRMT1	99	54.849	ENSMPUG00000004210	TRMT1	85	56.734	Mustela_putorius_furo
ENSLACG00000014585	TRMT1	99	56.979	ENSMLUG00000012809	TRMT1	85	58.435	Myotis_lucifugus
ENSLACG00000014585	TRMT1	93	58.188	ENSNGAG00000022486	Trmt1	86	58.188	Nannospalax_galili
ENSLACG00000014585	TRMT1	81	69.970	ENSNBRG00000024376	trmt1	85	70.303	Neolamprologus_brichardi
ENSLACG00000014585	TRMT1	74	61.006	ENSNLEG00000013019	-	84	61.006	Nomascus_leucogenys
ENSLACG00000014585	TRMT1	94	60.140	ENSMEUG00000013756	TRMT1	96	60.247	Notamacropus_eugenii
ENSLACG00000014585	TRMT1	78	57.783	ENSOPRG00000009471	-	71	59.124	Ochotona_princeps
ENSLACG00000014585	TRMT1	93	57.986	ENSODEG00000010323	TRMT1	87	57.986	Octodon_degus
ENSLACG00000014585	TRMT1	94	62.347	ENSONIG00000000400	trmt1	91	62.214	Oreochromis_niloticus
ENSLACG00000014585	TRMT1	78	57.950	ENSOCUG00000021934	TRMT1	90	57.796	Oryctolagus_cuniculus
ENSLACG00000014585	TRMT1	94	56.552	ENSORLG00000020074	trmt1	91	56.552	Oryzias_latipes
ENSLACG00000014585	TRMT1	94	60.035	ENSORLG00020007561	trmt1	90	59.413	Oryzias_latipes_hni
ENSLACG00000014585	TRMT1	94	60.035	ENSORLG00015006547	trmt1	87	60.035	Oryzias_latipes_hsok
ENSLACG00000014585	TRMT1	94	60.209	ENSOMEG00000019343	trmt1	87	60.209	Oryzias_melastigma
ENSLACG00000014585	TRMT1	93	57.812	ENSOGAG00000025576	TRMT1	90	57.986	Otolemur_garnettii
ENSLACG00000014585	TRMT1	99	43.067	ENSOARG00000009397	TRMT1	80	44.464	Ovis_aries
ENSLACG00000014585	TRMT1	99	49.264	ENSPPRG00000012117	TRMT1	87	50.694	Panthera_pardus
ENSLACG00000014585	TRMT1	75	55.822	ENSPTIG00000008833	TRMT1	82	59.155	Panthera_tigris_altaica
ENSLACG00000014585	TRMT1	86	45.725	ENSPTRG00000050421	-	84	45.725	Pan_troglodytes
ENSLACG00000014585	TRMT1	94	57.315	ENSPTRG00000010557	TRMT1	87	57.315	Pan_troglodytes
ENSLACG00000014585	TRMT1	94	58.520	ENSPANG00000009247	TRMT1	87	58.520	Papio_anubis
ENSLACG00000014585	TRMT1	73	47.921	ENSPANG00000034058	-	78	47.672	Papio_anubis
ENSLACG00000014585	TRMT1	94	60.839	ENSPKIG00000005309	trmt1	85	60.595	Paramormyrops_kingsleyae
ENSLACG00000014585	TRMT1	92	50.791	ENSPSIG00000008762	TRMT1	80	50.794	Pelodiscus_sinensis
ENSLACG00000014585	TRMT1	95	61.592	ENSPMGG00000019764	trmt1	91	61.821	Periophthalmus_magnuspinnatus
ENSLACG00000014585	TRMT1	93	58.188	ENSPEMG00000016247	Trmt1	86	58.362	Peromyscus_maniculatus_bairdii
ENSLACG00000014585	TRMT1	94	55.986	ENSPMAG00000004329	trmt1	89	56.106	Petromyzon_marinus
ENSLACG00000014585	TRMT1	96	60.684	ENSPCIG00000019273	TRMT1	88	61.160	Phascolarctos_cinereus
ENSLACG00000014585	TRMT1	95	62.674	ENSPFOG00000008527	trmt1	89	62.718	Poecilia_formosa
ENSLACG00000014585	TRMT1	95	61.979	ENSPLAG00000018788	trmt1	89	62.949	Poecilia_latipinna
ENSLACG00000014585	TRMT1	95	62.500	ENSPMEG00000013120	trmt1	89	62.435	Poecilia_mexicana
ENSLACG00000014585	TRMT1	95	61.672	ENSPREG00000000211	trmt1	85	62.390	Poecilia_reticulata
ENSLACG00000014585	TRMT1	94	57.315	ENSPPYG00000009622	TRMT1	87	57.315	Pongo_abelii
ENSLACG00000014585	TRMT1	93	52.613	ENSPCAG00000003698	TRMT1	87	52.613	Procavia_capensis
ENSLACG00000014585	TRMT1	94	56.397	ENSPCOG00000008653	TRMT1	90	56.397	Propithecus_coquereli
ENSLACG00000014585	TRMT1	96	56.807	ENSPVAG00000015076	TRMT1	88	57.290	Pteropus_vampyrus
ENSLACG00000014585	TRMT1	94	61.646	ENSPNYG00000013960	trmt1	92	61.796	Pundamilia_nyererei
ENSLACG00000014585	TRMT1	87	61.522	ENSPNAG00000024859	trmt1	89	61.522	Pygocentrus_nattereri
ENSLACG00000014585	TRMT1	93	58.494	ENSRNOG00000002914	Trmt1	89	58.494	Rattus_norvegicus
ENSLACG00000014585	TRMT1	90	44.524	ENSRBIG00000037505	-	87	45.422	Rhinopithecus_bieti
ENSLACG00000014585	TRMT1	94	58.348	ENSRBIG00000038324	TRMT1	87	58.348	Rhinopithecus_bieti
ENSLACG00000014585	TRMT1	94	58.348	ENSRROG00000028599	TRMT1	87	58.348	Rhinopithecus_roxellana
ENSLACG00000014585	TRMT1	90	43.627	ENSRROG00000031847	-	86	44.524	Rhinopithecus_roxellana
ENSLACG00000014585	TRMT1	84	35.448	YDR120C	-	92	35.581	Saccharomyces_cerevisiae
ENSLACG00000014585	TRMT1	94	55.766	ENSSBOG00000028861	TRMT1	93	55.766	Saimiri_boliviensis_boliviensis
ENSLACG00000014585	TRMT1	94	60.070	ENSSHAG00000014381	TRMT1	93	60.070	Sarcophilus_harrisii
ENSLACG00000014585	TRMT1	96	59.727	ENSSFOG00015004139	trmt1	84	60.453	Scleropages_formosus
ENSLACG00000014585	TRMT1	94	61.806	ENSSMAG00000021136	trmt1	85	61.913	Scophthalmus_maximus
ENSLACG00000014585	TRMT1	94	62.238	ENSSDUG00000012740	trmt1	84	62.390	Seriola_dumerili
ENSLACG00000014585	TRMT1	94	61.888	ENSSLDG00000005971	trmt1	84	62.039	Seriola_lalandi_dorsalis
ENSLACG00000014585	TRMT1	84	58.140	ENSSARG00000005138	TRMT1	90	58.140	Sorex_araneus
ENSLACG00000014585	TRMT1	96	52.641	ENSSPUG00000001084	TRMT1	88	57.006	Sphenodon_punctatus
ENSLACG00000014585	TRMT1	95	58.763	ENSSPAG00000007153	trmt1	95	58.854	Stegastes_partitus
ENSLACG00000014585	TRMT1	99	56.343	ENSSSCG00000013744	TRMT1	90	58.217	Sus_scrofa
ENSLACG00000014585	TRMT1	93	56.620	ENSTRUG00000010700	trmt1	86	56.620	Takifugu_rubripes
ENSLACG00000014585	TRMT1	94	61.996	ENSTNIG00000018808	trmt1	99	61.996	Tetraodon_nigroviridis
ENSLACG00000014585	TRMT1	99	55.229	ENSTTRG00000006379	TRMT1	87	56.410	Tursiops_truncatus
ENSLACG00000014585	TRMT1	99	56.026	ENSUAMG00000022911	TRMT1	94	55.077	Ursus_americanus
ENSLACG00000014585	TRMT1	99	55.250	ENSUMAG00000006027	TRMT1	90	57.241	Ursus_maritimus
ENSLACG00000014585	TRMT1	99	56.290	ENSVVUG00000024177	TRMT1	87	58.120	Vulpes_vulpes
ENSLACG00000014585	TRMT1	76	60.730	ENSXETG00000033863	TRMT1	92	60.776	Xenopus_tropicalis
ENSLACG00000014585	TRMT1	94	62.478	ENSXCOG00000015733	trmt1	89	62.827	Xiphophorus_couchianus
ENSLACG00000014585	TRMT1	94	62.063	ENSXMAG00000013823	trmt1	98	62.413	Xiphophorus_maculatus