EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000014604 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 2080 bases
Position: chrJH126884.1:1058871-1060950
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000016571	RVT_1	PF00078.27	4.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000016685	-	558	-	ENSLACP00000016571	186 (aa)	-	H3B3V0

Gene Model

Click here to download ENSLACG00000014604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000014604's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000014604	-	72	31.852	ENSLACG00000010373	-	55	31.852
ENSLACG00000014604	-	63	34.746	ENSLACG00000000714	-	58	34.783
ENSLACG00000014604	-	67	36.000	ENSLACG00000016284	-	63	34.426
ENSLACG00000014604	-	72	31.884	ENSLACG00000000981	-	61	31.884
ENSLACG00000014604	-	54	33.654	ENSLACG00000000964	-	88	34.615
ENSLACG00000014604	-	59	53.211	ENSLACG00000011577	-	93	53.211
ENSLACG00000014604	-	73	30.612	ENSLACG00000005904	-	51	30.612

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000014604	-	77	38.255	ENSGAFG00000008149	-	51	38.255	Gambusia_affinis
ENSLACG00000014604	-	78	34.000	ENSORLG00000026658	-	60	34.000	Oryzias_latipes
ENSLACG00000014604	-	79	31.757	ENSPKIG00000019619	-	52	31.757	Paramormyrops_kingsleyae
ENSLACG00000014604	-	72	35.000	ENSPSIG00000001816	-	50	35.000	Pelodiscus_sinensis
ENSLACG00000014604	-	72	37.500	ENSPNAG00000001979	-	52	37.500	Pygocentrus_nattereri
ENSLACG00000014604	-	92	36.571	ENSXMAG00000027711	-	51	36.571	Xiphophorus_maculatus