EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000014623 (Gene tree)
Gene ID: 102347167
Gene Symbol: SLBP
Alias: HBP
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 16375 bases
Position: chrJH126893.1:1065089-1081463
Accession: 102347167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000016592	SLBP_RNA_bind	PF15247.6	5.2e-30	1	1
ENSLACP00000016591	SLBP_RNA_bind	PF15247.6	5.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000016706	SLBP-202	828	-	ENSLACP00000016592	276 (aa)	-	H3B3X1
ENSLACT00000016705	SLBP-201	1436	XM_005996774	ENSLACP00000016591	293 (aa)	XP_005996836	H3B3X0

Gene Model

Click here to download ENSLACG00000014623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000014623's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000014623	SLBP	91	56.078	ENSG00000163950	SLBP	90	60.465	Homo_sapiens
ENSLACG00000014623	SLBP	89	50.388	ENSAPOG00000004953	slbp	91	50.388	Acanthochromis_polyacanthus
ENSLACG00000014623	SLBP	75	62.085	ENSAMEG00000016915	SLBP	96	62.085	Ailuropoda_melanoleuca
ENSLACG00000014623	SLBP	86	50.407	ENSACIG00000022308	slbp	93	50.598	Amphilophus_citrinellus
ENSLACG00000014623	SLBP	89	48.062	ENSAOCG00000024545	slbp	91	48.062	Amphiprion_ocellaris
ENSLACG00000014623	SLBP	89	48.450	ENSAPEG00000017629	slbp	91	48.450	Amphiprion_percula
ENSLACG00000014623	SLBP	88	50.388	ENSATEG00000016358	slbp	95	49.097	Anabas_testudineus
ENSLACG00000014623	SLBP	75	63.033	ENSAPLG00000015989	-	96	63.033	Anas_platyrhynchos
ENSLACG00000014623	SLBP	91	55.472	ENSANAG00000034769	SLBP	90	60.930	Aotus_nancymaae
ENSLACG00000014623	SLBP	86	50.787	ENSACLG00000007036	-	90	50.787	Astatotilapia_calliptera
ENSLACG00000014623	SLBP	86	56.574	ENSAMXG00000014527	slbp	95	54.380	Astyanax_mexicanus
ENSLACG00000014623	SLBP	91	58.203	ENSBTAG00000001328	SLBP	89	58.203	Bos_taurus
ENSLACG00000014623	SLBP	92	56.154	ENSCJAG00000001790	SLBP	90	54.340	Callithrix_jacchus
ENSLACG00000014623	SLBP	97	53.287	ENSCAFG00000015016	SLBP	95	54.138	Canis_familiaris
ENSLACG00000014623	SLBP	97	53.287	ENSCAFG00020012334	SLBP	95	54.138	Canis_lupus_dingo
ENSLACG00000014623	SLBP	91	57.812	ENSCHIG00000019364	SLBP	89	58.203	Capra_hircus
ENSLACG00000014623	SLBP	79	60.181	ENSTSYG00000000376	SLBP	88	60.849	Carlito_syrichta
ENSLACG00000014623	SLBP	62	57.386	ENSCAPG00000016340	SLBP	95	57.955	Cavia_aperea
ENSLACG00000014623	SLBP	77	58.525	ENSCPOG00000000031	SLBP	89	55.039	Cavia_porcellus
ENSLACG00000014623	SLBP	94	53.506	ENSCATG00000029173	SLBP	90	60.930	Cercocebus_atys
ENSLACG00000014623	SLBP	77	59.259	ENSCLAG00000008157	SLBP	94	56.015	Chinchilla_lanigera
ENSLACG00000014623	SLBP	91	47.490	ENSCSAG00000015628	SLBP	88	47.287	Chlorocebus_sabaeus
ENSLACG00000014623	SLBP	91	61.569	ENSCPBG00000000746	SLBP	92	59.848	Chrysemys_picta_bellii
ENSLACG00000014623	SLBP	75	61.429	ENSCANG00000041008	SLBP	96	61.429	Colobus_angolensis_palliatus
ENSLACG00000014623	SLBP	96	55.882	ENSCGRG00001009760	-	95	56.250	Cricetulus_griseus_chok1gshd
ENSLACG00000014623	SLBP	91	57.087	ENSCGRG00001012991	-	95	54.317	Cricetulus_griseus_chok1gshd
ENSLACG00000014623	SLBP	96	55.882	ENSCGRG00000004506	Slbp	95	56.250	Cricetulus_griseus_crigri
ENSLACG00000014623	SLBP	86	48.207	ENSCSEG00000020337	-	91	46.642	Cynoglossus_semilaevis
ENSLACG00000014623	SLBP	87	51.600	ENSCVAG00000019592	-	94	49.071	Cyprinodon_variegatus
ENSLACG00000014623	SLBP	86	49.206	ENSDARG00000100558	slbp	83	48.855	Danio_rerio
ENSLACG00000014623	SLBP	96	55.762	ENSDNOG00000047539	SLBP	95	56.134	Dasypus_novemcinctus
ENSLACG00000014623	SLBP	75	60.952	ENSDORG00000003028	Slbp	96	67.089	Dipodomys_ordii
ENSLACG00000014623	SLBP	72	62.069	ENSETEG00000004641	SLBP	92	59.641	Echinops_telfairi
ENSLACG00000014623	SLBP	66	61.290	ENSEASG00005022714	SLBP	95	61.828	Equus_asinus_asinus
ENSLACG00000014623	SLBP	72	61.881	ENSECAG00000011689	SLBP	62	61.881	Equus_caballus
ENSLACG00000014623	SLBP	89	51.154	ENSELUG00000012854	slbp	95	50.929	Esox_lucius
ENSLACG00000014623	SLBP	97	52.249	ENSFCAG00000000169	SLBP	90	61.395	Felis_catus
ENSLACG00000014623	SLBP	96	56.343	ENSFALG00000010003	-	96	56.343	Ficedula_albicollis
ENSLACG00000014623	SLBP	77	60.185	ENSFDAG00000007592	SLBP	95	56.471	Fukomys_damarensis
ENSLACG00000014623	SLBP	91	49.270	ENSFHEG00000007497	slbp	96	49.270	Fundulus_heteroclitus
ENSLACG00000014623	SLBP	54	63.226	ENSGMOG00000015352	slbp	93	66.438	Gadus_morhua
ENSLACG00000014623	SLBP	95	57.736	ENSGALG00000015712	SLBP	95	57.736	Gallus_gallus
ENSLACG00000014623	SLBP	86	51.587	ENSGAFG00000019577	slbp	91	49.615	Gambusia_affinis
ENSLACG00000014623	SLBP	89	48.594	ENSGACG00000019596	slbp	93	48.594	Gasterosteus_aculeatus
ENSLACG00000014623	SLBP	83	61.304	ENSGAGG00000012096	SLBP	92	59.227	Gopherus_agassizii
ENSLACG00000014623	SLBP	91	56.078	ENSGGOG00000003167	SLBP	90	60.465	Gorilla_gorilla
ENSLACG00000014623	SLBP	86	50.787	ENSHBUG00000003338	-	90	50.787	Haplochromis_burtoni
ENSLACG00000014623	SLBP	68	56.771	ENSHGLG00000005955	-	91	51.282	Heterocephalus_glaber_female
ENSLACG00000014623	SLBP	89	50.400	ENSHGLG00000008313	-	92	51.953	Heterocephalus_glaber_female
ENSLACG00000014623	SLBP	77	56.542	ENSHGLG00000010461	-	92	52.227	Heterocephalus_glaber_female
ENSLACG00000014623	SLBP	89	51.200	ENSHGLG00100010510	-	92	52.734	Heterocephalus_glaber_male
ENSLACG00000014623	SLBP	77	55.349	ENSHGLG00100014906	-	92	52.227	Heterocephalus_glaber_male
ENSLACG00000014623	SLBP	77	59.908	ENSHGLG00100014018	-	92	60.513	Heterocephalus_glaber_male
ENSLACG00000014623	SLBP	89	49.231	ENSHCOG00000013425	slbp	91	49.231	Hippocampus_comes
ENSLACG00000014623	SLBP	78	56.164	ENSIPUG00000016780	slbp	82	56.109	Ictalurus_punctatus
ENSLACG00000014623	SLBP	77	61.111	ENSSTOG00000003262	SLBP	88	58.039	Ictidomys_tridecemlineatus
ENSLACG00000014623	SLBP	96	55.882	ENSJJAG00000002394	-	94	56.618	Jaculus_jaculus
ENSLACG00000014623	SLBP	96	56.618	ENSJJAG00000020549	-	95	56.985	Jaculus_jaculus
ENSLACG00000014623	SLBP	89	50.379	ENSKMAG00000008187	slbp	92	49.810	Kryptolebias_marmoratus
ENSLACG00000014623	SLBP	87	50.000	ENSLBEG00000024709	slbp	90	50.000	Labrus_bergylta
ENSLACG00000014623	SLBP	95	55.914	ENSLOCG00000011027	slbp	94	57.447	Lepisosteus_oculatus
ENSLACG00000014623	SLBP	71	63.500	ENSLAFG00000012933	SLBP	86	61.502	Loxodonta_africana
ENSLACG00000014623	SLBP	91	56.299	ENSMFAG00000030130	SLBP	89	47.843	Macaca_fascicularis
ENSLACG00000014623	SLBP	93	54.815	ENSMMUG00000032303	SLBP	92	61.611	Macaca_mulatta
ENSLACG00000014623	SLBP	53	55.844	ENSMNEG00000008082	SLBP	64	56.494	Macaca_nemestrina
ENSLACG00000014623	SLBP	75	62.085	ENSMLEG00000024639	SLBP	83	61.611	Mandrillus_leucophaeus
ENSLACG00000014623	SLBP	87	47.619	ENSMAMG00000001046	-	90	47.619	Mastacembelus_armatus
ENSLACG00000014623	SLBP	86	50.787	ENSMZEG00005017261	-	90	50.787	Maylandia_zebra
ENSLACG00000014623	SLBP	75	61.058	ENSMGAG00000013085	SLBP	96	61.058	Meleagris_gallopavo
ENSLACG00000014623	SLBP	96	55.515	ENSMAUG00000009490	Slbp	95	55.882	Mesocricetus_auratus
ENSLACG00000014623	SLBP	79	60.360	ENSMICG00000014244	SLBP	90	61.111	Microcebus_murinus
ENSLACG00000014623	SLBP	96	55.390	ENSMOCG00000015826	Slbp	95	60.648	Microtus_ochrogaster
ENSLACG00000014623	SLBP	89	49.407	ENSMMOG00000010181	slbp	94	49.402	Mola_mola
ENSLACG00000014623	SLBP	91	56.420	ENSMODG00000004304	SLBP	95	56.809	Monodelphis_domestica
ENSLACG00000014623	SLBP	88	48.263	ENSMALG00000013883	-	67	48.689	Monopterus_albus
ENSLACG00000014623	SLBP	97	56.089	MGP_CAROLIEiJ_G0027117	Slbp	92	59.447	Mus_caroli
ENSLACG00000014623	SLBP	97	56.089	ENSMUSG00000004642	Slbp	94	58.447	Mus_musculus
ENSLACG00000014623	SLBP	97	56.089	MGP_PahariEiJ_G0016901	Slbp	92	59.447	Mus_pahari
ENSLACG00000014623	SLBP	97	56.089	MGP_SPRETEiJ_G0028113	Slbp	94	58.447	Mus_spretus
ENSLACG00000014623	SLBP	63	60.674	ENSMPUG00000011139	SLBP	90	60.674	Mustela_putorius_furo
ENSLACG00000014623	SLBP	76	58.019	ENSMLUG00000004425	SLBP	90	58.019	Myotis_lucifugus
ENSLACG00000014623	SLBP	96	55.926	ENSNGAG00000020799	Slbp	93	56.296	Nannospalax_galili
ENSLACG00000014623	SLBP	85	51.020	ENSNBRG00000006044	-	81	55.660	Neolamprologus_brichardi
ENSLACG00000014623	SLBP	91	54.580	ENSNLEG00000000048	SLBP	90	60.465	Nomascus_leucogenys
ENSLACG00000014623	SLBP	55	66.026	ENSMEUG00000002501	SLBP	94	64.497	Notamacropus_eugenii
ENSLACG00000014623	SLBP	77	59.722	ENSODEG00000012641	SLBP	91	55.686	Octodon_degus
ENSLACG00000014623	SLBP	86	51.373	ENSONIG00000017469	-	90	51.373	Oreochromis_niloticus
ENSLACG00000014623	SLBP	75	63.636	ENSOANG00000014243	SLBP	91	63.158	Ornithorhynchus_anatinus
ENSLACG00000014623	SLBP	89	48.221	ENSORLG00000024887	-	93	46.992	Oryzias_latipes
ENSLACG00000014623	SLBP	90	47.471	ENSORLG00020007798	slbp	92	47.471	Oryzias_latipes_hni
ENSLACG00000014623	SLBP	89	47.431	ENSORLG00015016656	slbp	93	45.113	Oryzias_latipes_hsok
ENSLACG00000014623	SLBP	89	48.221	ENSOMEG00000010818	slbp	93	45.865	Oryzias_melastigma
ENSLACG00000014623	SLBP	91	58.039	ENSOGAG00000009750	SLBP	88	58.039	Otolemur_garnettii
ENSLACG00000014623	SLBP	75	62.559	ENSOARG00000016090	SLBP	96	63.033	Ovis_aries
ENSLACG00000014623	SLBP	91	56.471	ENSPPAG00000033300	SLBP	90	60.465	Pan_paniscus
ENSLACG00000014623	SLBP	77	60.648	ENSPPRG00000016897	SLBP	96	56.917	Panthera_pardus
ENSLACG00000014623	SLBP	66	60.215	ENSPTIG00000015057	SLBP	95	60.753	Panthera_tigris_altaica
ENSLACG00000014623	SLBP	92	56.538	ENSPTRG00000015832	SLBP	90	60.465	Pan_troglodytes
ENSLACG00000014623	SLBP	94	53.506	ENSPANG00000004932	SLBP	90	60.930	Papio_anubis
ENSLACG00000014623	SLBP	94	54.779	ENSPKIG00000006183	slbp	93	55.435	Paramormyrops_kingsleyae
ENSLACG00000014623	SLBP	84	48.945	ENSPMGG00000017684	-	99	48.945	Periophthalmus_magnuspinnatus
ENSLACG00000014623	SLBP	96	56.296	ENSPEMG00000018369	Slbp	93	56.667	Peromyscus_maniculatus_bairdii
ENSLACG00000014623	SLBP	96	53.020	ENSPCIG00000013575	SLBP	81	53.020	Phascolarctos_cinereus
ENSLACG00000014623	SLBP	87	50.198	ENSPFOG00000000462	slbp	92	48.855	Poecilia_formosa
ENSLACG00000014623	SLBP	87	50.198	ENSPLAG00000008300	slbp	92	49.434	Poecilia_latipinna
ENSLACG00000014623	SLBP	87	50.198	ENSPMEG00000020807	slbp	92	48.855	Poecilia_mexicana
ENSLACG00000014623	SLBP	87	50.198	ENSPREG00000004561	slbp	92	48.855	Poecilia_reticulata
ENSLACG00000014623	SLBP	91	56.250	ENSPPYG00000014529	SLBP	88	56.078	Pongo_abelii
ENSLACG00000014623	SLBP	92	56.977	ENSPCOG00000017399	SLBP	90	61.111	Propithecus_coquereli
ENSLACG00000014623	SLBP	91	54.510	ENSPVAG00000002807	SLBP	88	56.078	Pteropus_vampyrus
ENSLACG00000014623	SLBP	86	50.787	ENSPNYG00000005451	-	90	50.787	Pundamilia_nyererei
ENSLACG00000014623	SLBP	86	54.098	ENSPNAG00000018503	slbp	92	53.876	Pygocentrus_nattereri
ENSLACG00000014623	SLBP	96	55.926	ENSRNOG00000037162	Slbp	93	56.667	Rattus_norvegicus
ENSLACG00000014623	SLBP	94	53.506	ENSRBIG00000039159	SLBP	90	60.930	Rhinopithecus_bieti
ENSLACG00000014623	SLBP	91	56.471	ENSRROG00000030081	SLBP	90	56.471	Rhinopithecus_roxellana
ENSLACG00000014623	SLBP	66	59.677	ENSSBOG00000033897	SLBP	95	59.140	Saimiri_boliviensis_boliviensis
ENSLACG00000014623	SLBP	95	52.921	ENSSHAG00000013939	SLBP	93	53.979	Sarcophilus_harrisii
ENSLACG00000014623	SLBP	88	53.906	ENSSFOG00015019429	slbp	89	54.510	Scleropages_formosus
ENSLACG00000014623	SLBP	88	48.659	ENSSMAG00000016028	-	91	48.659	Scophthalmus_maximus
ENSLACG00000014623	SLBP	87	50.794	ENSSDUG00000000855	-	94	50.000	Seriola_dumerili
ENSLACG00000014623	SLBP	52	54.730	ENSSLDG00000022893	-	86	54.730	Seriola_lalandi_dorsalis
ENSLACG00000014623	SLBP	85	38.077	ENSSLDG00000007554	-	84	38.077	Seriola_lalandi_dorsalis
ENSLACG00000014623	SLBP	91	57.874	ENSSPUG00000016007	SLBP	92	57.874	Sphenodon_punctatus
ENSLACG00000014623	SLBP	86	51.587	ENSSPAG00000004021	slbp	89	51.587	Stegastes_partitus
ENSLACG00000014623	SLBP	97	52.941	ENSSSCG00000008676	SLBP	95	52.941	Sus_scrofa
ENSLACG00000014623	SLBP	91	59.684	ENSTGUG00000010626	-	95	60.079	Taeniopygia_guttata
ENSLACG00000014623	SLBP	94	46.886	ENSTRUG00000000688	slbp	96	46.886	Takifugu_rubripes
ENSLACG00000014623	SLBP	86	44.758	ENSTNIG00000000484	-	98	43.969	Tetraodon_nigroviridis
ENSLACG00000014623	SLBP	91	36.328	ENSTBEG00000004085	SLBP	96	36.328	Tupaia_belangeri
ENSLACG00000014623	SLBP	55	62.179	ENSTTRG00000004010	-	99	57.542	Tursiops_truncatus
ENSLACG00000014623	SLBP	75	58.294	ENSTTRG00000010901	-	96	60.952	Tursiops_truncatus
ENSLACG00000014623	SLBP	97	55.720	ENSUAMG00000012990	SLBP	94	55.720	Ursus_americanus
ENSLACG00000014623	SLBP	66	60.215	ENSUMAG00000006119	SLBP	95	60.753	Ursus_maritimus
ENSLACG00000014623	SLBP	97	52.595	ENSVVUG00000015578	-	95	53.448	Vulpes_vulpes
ENSLACG00000014623	SLBP	93	58.527	ENSXETG00000003876	slbp	94	57.752	Xenopus_tropicalis
ENSLACG00000014623	SLBP	77	51.754	ENSXCOG00000008275	slbp	84	51.073	Xiphophorus_couchianus
ENSLACG00000014623	SLBP	87	50.394	ENSXMAG00000001331	-	91	48.855	Xiphophorus_maculatus