EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000014728 (Gene tree)
Gene ID: 102348619
Gene Symbol: SFPQ
Alias: PPP1R140|PSF
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 30465 bases
Position: chrJH126588.1:1086716-1117180
Accession: 102348619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000016718	RRM_1	PF00076.22	6e-30	1	2
ENSLACP00000016718	RRM_1	PF00076.22	6e-30	2	2
ENSLACP00000023106	RRM_1	PF00076.22	7.3e-30	1	2
ENSLACP00000023106	RRM_1	PF00076.22	7.3e-30	2	2
ENSLACP00000016719	RRM_1	PF00076.22	7.4e-30	1	2
ENSLACP00000016719	RRM_1	PF00076.22	7.4e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000026117	SFPQ-203	2115	XM_005988495	ENSLACP00000023106	612 (aa)	XP_014352629	M3XK50
ENSLACT00000016834	SFPQ-201	2328	-	ENSLACP00000016718	571 (aa)	-	H3B497
ENSLACT00000016835	SFPQ-202	1866	-	ENSLACP00000016719	622 (aa)	-	H3B498

Gene Model

Click here to download ENSLACG00000014728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000014728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000014728	SFPQ	69	59.649	ENSLACG00000010762	PSPC1	88	58.030
ENSLACG00000014728	SFPQ	50	69.444	ENSLACG00000000598	NONO	85	61.173

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000014728	SFPQ	70	80.093	ENSG00000116560	SFPQ	97	70.320	Homo_sapiens
ENSLACG00000014728	SFPQ	70	73.953	ENSAPOG00000024257	sfpq	61	73.488	Acanthochromis_polyacanthus
ENSLACG00000014728	SFPQ	70	80.093	ENSAMEG00000000815	SFPQ	99	76.364	Ailuropoda_melanoleuca
ENSLACG00000014728	SFPQ	95	59.296	ENSACIG00000000905	sfpq	99	58.039	Amphilophus_citrinellus
ENSLACG00000014728	SFPQ	70	73.256	ENSAOCG00000002889	sfpq	59	73.256	Amphiprion_ocellaris
ENSLACG00000014728	SFPQ	70	73.256	ENSAPEG00000016556	sfpq	59	73.256	Amphiprion_percula
ENSLACG00000014728	SFPQ	82	68.017	ENSATEG00000002981	sfpq	76	68.485	Anabas_testudineus
ENSLACG00000014728	SFPQ	57	57.103	ENSANAG00000021268	-	100	53.390	Aotus_nancymaae
ENSLACG00000014728	SFPQ	55	62.463	ENSANAG00000037798	-	96	60.294	Aotus_nancymaae
ENSLACG00000014728	SFPQ	67	72.439	ENSANAG00000027438	-	64	69.873	Aotus_nancymaae
ENSLACG00000014728	SFPQ	70	71.694	ENSACLG00000022332	sfpq	77	62.360	Astatotilapia_calliptera
ENSLACG00000014728	SFPQ	70	74.074	ENSAMXG00000011538	sfpq	78	63.894	Astyanax_mexicanus
ENSLACG00000014728	SFPQ	70	80.093	ENSBTAG00000016328	SFPQ	61	76.027	Bos_taurus
ENSLACG00000014728	SFPQ	70	80.093	ENSCJAG00000001431	SFPQ	61	76.027	Callithrix_jacchus
ENSLACG00000014728	SFPQ	70	80.093	ENSCAFG00000003595	-	66	76.027	Canis_familiaris
ENSLACG00000014728	SFPQ	70	74.828	ENSCAFG00000017608	-	65	75.506	Canis_familiaris
ENSLACG00000014728	SFPQ	70	77.701	ENSCAFG00000018271	-	68	69.978	Canis_familiaris
ENSLACG00000014728	SFPQ	57	73.789	ENSCAFG00020010702	-	100	72.238	Canis_lupus_dingo
ENSLACG00000014728	SFPQ	70	77.701	ENSCAFG00020004881	-	65	72.146	Canis_lupus_dingo
ENSLACG00000014728	SFPQ	70	80.093	ENSCHIG00000023097	SFPQ	61	76.027	Capra_hircus
ENSLACG00000014728	SFPQ	57	78.754	ENSTSYG00000037120	-	100	74.157	Carlito_syrichta
ENSLACG00000014728	SFPQ	57	68.000	ENSTSYG00000035106	-	98	67.908	Carlito_syrichta
ENSLACG00000014728	SFPQ	57	70.739	ENSCPOG00000015018	-	100	67.760	Cavia_porcellus
ENSLACG00000014728	SFPQ	70	80.093	ENSCCAG00000029361	-	61	76.027	Cebus_capucinus
ENSLACG00000014728	SFPQ	70	54.566	ENSCATG00000032664	-	60	51.606	Cercocebus_atys
ENSLACG00000014728	SFPQ	62	82.073	ENSCATG00000036179	-	55	74.211	Cercocebus_atys
ENSLACG00000014728	SFPQ	57	78.754	ENSCLAG00000009583	-	100	74.157	Chinchilla_lanigera
ENSLACG00000014728	SFPQ	70	80.093	ENSCSAG00000001082	SFPQ	61	76.027	Chlorocebus_sabaeus
ENSLACG00000014728	SFPQ	62	77.749	ENSCHOG00000009131	SFPQ	100	73.298	Choloepus_hoffmanni
ENSLACG00000014728	SFPQ	70	80.638	ENSCPBG00000018674	SFPQ	67	79.954	Chrysemys_picta_bellii
ENSLACG00000014728	SFPQ	57	78.754	ENSCANG00000028087	-	100	74.157	Colobus_angolensis_palliatus
ENSLACG00000014728	SFPQ	70	80.324	ENSCGRG00001011698	Sfpq	62	76.256	Cricetulus_griseus_chok1gshd
ENSLACG00000014728	SFPQ	70	80.742	ENSCGRG00000010128	Sfpq	95	76.782	Cricetulus_griseus_crigri
ENSLACG00000014728	SFPQ	76	67.377	ENSCVAG00000019538	sfpq	64	66.981	Cyprinodon_variegatus
ENSLACG00000014728	SFPQ	71	71.818	ENSDARG00000011564	sfpq	100	81.739	Danio_rerio
ENSLACG00000014728	SFPQ	70	80.093	ENSDNOG00000049454	SFPQ	61	76.027	Dasypus_novemcinctus
ENSLACG00000014728	SFPQ	70	80.093	ENSDORG00000008109	Sfpq	62	76.027	Dipodomys_ordii
ENSLACG00000014728	SFPQ	70	80.093	ENSEASG00005012012	SFPQ	61	76.027	Equus_asinus_asinus
ENSLACG00000014728	SFPQ	70	80.093	ENSECAG00000000642	SFPQ	61	76.027	Equus_caballus
ENSLACG00000014728	SFPQ	70	73.148	ENSELUG00000023145	sfpq	66	72.917	Esox_lucius
ENSLACG00000014728	SFPQ	70	80.093	ENSFCAG00000042862	SFPQ	62	76.027	Felis_catus
ENSLACG00000014728	SFPQ	57	79.887	ENSFALG00000000731	SFPQ	100	78.754	Ficedula_albicollis
ENSLACG00000014728	SFPQ	57	69.748	ENSFDAG00000017723	-	100	69.382	Fukomys_damarensis
ENSLACG00000014728	SFPQ	70	67.442	ENSFHEG00000015200	sfpq	64	59.959	Fundulus_heteroclitus
ENSLACG00000014728	SFPQ	95	58.226	ENSGMOG00000011957	sfpq	66	73.563	Gadus_morhua
ENSLACG00000014728	SFPQ	70	73.563	ENSGMOG00000011950	SFPQ	80	69.979	Gadus_morhua
ENSLACG00000014728	SFPQ	70	81.293	ENSGALG00000002514	SFPQ	68	79.043	Gallus_gallus
ENSLACG00000014728	SFPQ	95	56.410	ENSGAFG00000014571	sfpq	65	69.509	Gambusia_affinis
ENSLACG00000014728	SFPQ	71	73.804	ENSGACG00000002034	sfpq	69	73.804	Gasterosteus_aculeatus
ENSLACG00000014728	SFPQ	71	79.587	ENSGGOG00000026354	SFPQ	100	74.157	Gorilla_gorilla
ENSLACG00000014728	SFPQ	70	71.694	ENSHBUG00000016818	sfpq	77	62.360	Haplochromis_burtoni
ENSLACG00000014728	SFPQ	70	79.540	ENSHGLG00000012001	SFPQ	63	75.510	Heterocephalus_glaber_female
ENSLACG00000014728	SFPQ	57	78.754	ENSHGLG00100004136	-	100	74.157	Heterocephalus_glaber_male
ENSLACG00000014728	SFPQ	70	72.917	ENSHCOG00000008612	sfpq	65	74.438	Hippocampus_comes
ENSLACG00000014728	SFPQ	73	71.556	ENSIPUG00000013076	SFPQ	75	71.556	Ictalurus_punctatus
ENSLACG00000014728	SFPQ	57	78.754	ENSSTOG00000014004	-	100	74.157	Ictidomys_tridecemlineatus
ENSLACG00000014728	SFPQ	70	80.093	ENSJJAG00000015633	Sfpq	61	76.027	Jaculus_jaculus
ENSLACG00000014728	SFPQ	75	65.789	ENSKMAG00000000238	sfpq	57	65.789	Kryptolebias_marmoratus
ENSLACG00000014728	SFPQ	68	73.643	ENSLBEG00000003163	sfpq	57	73.397	Labrus_bergylta
ENSLACG00000014728	SFPQ	70	79.398	ENSLOCG00000001067	sfpq	70	80.253	Lepisosteus_oculatus
ENSLACG00000014728	SFPQ	70	80.093	ENSLAFG00000015951	SFPQ	69	76.027	Loxodonta_africana
ENSLACG00000014728	SFPQ	70	80.093	ENSMFAG00000000797	SFPQ	61	76.027	Macaca_fascicularis
ENSLACG00000014728	SFPQ	70	80.093	ENSMMUG00000019154	SFPQ	61	76.027	Macaca_mulatta
ENSLACG00000014728	SFPQ	70	80.093	ENSMNEG00000038895	SFPQ	61	76.027	Macaca_nemestrina
ENSLACG00000014728	SFPQ	57	76.487	ENSMLEG00000010643	-	100	71.910	Mandrillus_leucophaeus
ENSLACG00000014728	SFPQ	51	73.101	ENSMLEG00000035352	-	99	66.465	Mandrillus_leucophaeus
ENSLACG00000014728	SFPQ	99	54.745	ENSMZEG00005026091	sfpq	66	68.860	Maylandia_zebra
ENSLACG00000014728	SFPQ	59	82.006	ENSMGAG00000004237	SFPQ	100	76.650	Meleagris_gallopavo
ENSLACG00000014728	SFPQ	70	80.093	ENSMAUG00000006402	Sfpq	62	76.256	Mesocricetus_auratus
ENSLACG00000014728	SFPQ	70	80.093	ENSMICG00000027265	SFPQ	61	76.027	Microcebus_murinus
ENSLACG00000014728	SFPQ	70	77.778	ENSMOCG00000019075	Sfpq	89	74.253	Microtus_ochrogaster
ENSLACG00000014728	SFPQ	70	80.787	ENSMODG00000017937	SFPQ	67	73.614	Monodelphis_domestica
ENSLACG00000014728	SFPQ	70	73.782	ENSMALG00000010381	sfpq	82	63.352	Monopterus_albus
ENSLACG00000014728	SFPQ	70	80.324	MGP_CAROLIEiJ_G0026487	Sfpq	62	76.256	Mus_caroli
ENSLACG00000014728	SFPQ	70	80.324	ENSMUSG00000028820	Sfpq	62	76.256	Mus_musculus
ENSLACG00000014728	SFPQ	70	80.324	MGP_PahariEiJ_G0028818	Sfpq	62	76.256	Mus_pahari
ENSLACG00000014728	SFPQ	70	80.324	MGP_SPRETEiJ_G0027466	Sfpq	62	76.256	Mus_spretus
ENSLACG00000014728	SFPQ	54	79.299	ENSMPUG00000014931	-	99	73.633	Mustela_putorius_furo
ENSLACG00000014728	SFPQ	70	80.093	ENSMLUG00000027090	SFPQ	99	75.056	Myotis_lucifugus
ENSLACG00000014728	SFPQ	70	80.324	ENSNGAG00000000888	Sfpq	61	76.256	Nannospalax_galili
ENSLACG00000014728	SFPQ	92	60.209	ENSNBRG00000017479	sfpq	76	62.335	Neolamprologus_brichardi
ENSLACG00000014728	SFPQ	57	78.754	ENSNLEG00000035521	-	100	74.157	Nomascus_leucogenys
ENSLACG00000014728	SFPQ	70	80.930	ENSMEUG00000014082	SFPQ	63	74.773	Notamacropus_eugenii
ENSLACG00000014728	SFPQ	72	78.076	ENSOPRG00000013696	SFPQ	63	74.667	Ochotona_princeps
ENSLACG00000014728	SFPQ	68	69.928	ENSODEG00000005485	SFPQ	77	63.972	Octodon_degus
ENSLACG00000014728	SFPQ	70	71.926	ENSONIG00000017737	sfpq	63	71.298	Oreochromis_niloticus
ENSLACG00000014728	SFPQ	57	78.592	ENSOANG00000008789	-	100	73.938	Ornithorhynchus_anatinus
ENSLACG00000014728	SFPQ	70	80.093	ENSOCUG00000001877	SFPQ	85	76.552	Oryctolagus_cuniculus
ENSLACG00000014728	SFPQ	70	70.465	ENSORLG00000007459	sfpq	57	67.674	Oryzias_latipes
ENSLACG00000014728	SFPQ	93	56.810	ENSORLG00020011818	sfpq	57	67.674	Oryzias_latipes_hni
ENSLACG00000014728	SFPQ	70	70.465	ENSORLG00015002131	sfpq	57	67.674	Oryzias_latipes_hsok
ENSLACG00000014728	SFPQ	80	65.870	ENSOMEG00000018020	sfpq	60	65.000	Oryzias_melastigma
ENSLACG00000014728	SFPQ	70	81.019	ENSOGAG00000027710	SFPQ	82	76.027	Otolemur_garnettii
ENSLACG00000014728	SFPQ	71	79.499	ENSOARG00000019439	SFPQ	67	76.018	Ovis_aries
ENSLACG00000014728	SFPQ	70	80.093	ENSPPAG00000030078	SFPQ	61	76.027	Pan_paniscus
ENSLACG00000014728	SFPQ	57	78.711	ENSPPRG00000015478	-	100	73.950	Panthera_pardus
ENSLACG00000014728	SFPQ	57	78.754	ENSPTIG00000007710	-	100	74.157	Panthera_tigris_altaica
ENSLACG00000014728	SFPQ	70	74.074	ENSPTRG00000000518	SFPQ	60	70.091	Pan_troglodytes
ENSLACG00000014728	SFPQ	70	80.093	ENSPANG00000005380	SFPQ	64	76.027	Papio_anubis
ENSLACG00000014728	SFPQ	91	65.841	ENSPKIG00000023035	sfpq	85	69.598	Paramormyrops_kingsleyae
ENSLACG00000014728	SFPQ	70	81.944	ENSPSIG00000011494	SFPQ	99	80.556	Pelodiscus_sinensis
ENSLACG00000014728	SFPQ	70	67.442	ENSPMGG00000023883	sfpq	59	82.624	Periophthalmus_magnuspinnatus
ENSLACG00000014728	SFPQ	70	80.324	ENSPEMG00000009794	Sfpq	89	76.782	Peromyscus_maniculatus_bairdii
ENSLACG00000014728	SFPQ	56	72.642	ENSPMAG00000005583	sfpq	60	75.177	Petromyzon_marinus
ENSLACG00000014728	SFPQ	70	80.742	ENSPCIG00000000923	SFPQ	63	74.603	Phascolarctos_cinereus
ENSLACG00000014728	SFPQ	94	57.587	ENSPFOG00000003127	sfpq	71	67.890	Poecilia_formosa
ENSLACG00000014728	SFPQ	70	80.093	ENSPPYG00000001560	SFPQ	61	76.027	Pongo_abelii
ENSLACG00000014728	SFPQ	69	79.493	ENSPCAG00000006164	SFPQ	60	75.806	Procavia_capensis
ENSLACG00000014728	SFPQ	70	80.093	ENSPCOG00000027127	SFPQ	61	76.027	Propithecus_coquereli
ENSLACG00000014728	SFPQ	70	78.704	ENSPVAG00000001865	SFPQ	62	74.483	Pteropus_vampyrus
ENSLACG00000014728	SFPQ	70	71.694	ENSPNYG00000007494	sfpq	77	62.292	Pundamilia_nyererei
ENSLACG00000014728	SFPQ	95	59.804	ENSPNAG00000002128	sfpq	77	70.253	Pygocentrus_nattereri
ENSLACG00000014728	SFPQ	70	80.324	ENSRNOG00000058461	Sfpq	62	76.256	Rattus_norvegicus
ENSLACG00000014728	SFPQ	57	78.754	ENSRBIG00000035286	SFPQ	100	74.157	Rhinopithecus_bieti
ENSLACG00000014728	SFPQ	70	80.093	ENSRROG00000040992	SFPQ	100	74.157	Rhinopithecus_roxellana
ENSLACG00000014728	SFPQ	54	60.180	ENSSBOG00000033925	-	96	59.104	Saimiri_boliviensis_boliviensis
ENSLACG00000014728	SFPQ	57	78.754	ENSSBOG00000024972	-	100	74.157	Saimiri_boliviensis_boliviensis
ENSLACG00000014728	SFPQ	69	80.808	ENSSHAG00000016107	-	98	71.024	Sarcophilus_harrisii
ENSLACG00000014728	SFPQ	57	76.638	ENSSHAG00000012312	-	100	73.143	Sarcophilus_harrisii
ENSLACG00000014728	SFPQ	85	68.069	ENSSFOG00015009289	sfpq	91	70.077	Scleropages_formosus
ENSLACG00000014728	SFPQ	70	75.581	ENSSMAG00000018201	sfpq	67	73.649	Scophthalmus_maximus
ENSLACG00000014728	SFPQ	84	68.786	ENSSDUG00000008402	sfpq	68	74.393	Seriola_dumerili
ENSLACG00000014728	SFPQ	84	68.593	ENSSLDG00000018917	sfpq	68	74.172	Seriola_lalandi_dorsalis
ENSLACG00000014728	SFPQ	60	78.919	ENSSARG00000006409	SFPQ	100	74.531	Sorex_araneus
ENSLACG00000014728	SFPQ	70	74.419	ENSSPAG00000016550	sfpq	63	73.903	Stegastes_partitus
ENSLACG00000014728	SFPQ	70	80.093	ENSSSCG00000035690	SFPQ	62	76.027	Sus_scrofa
ENSLACG00000014728	SFPQ	70	81.019	ENSTGUG00000001722	SFPQ	99	80.093	Taeniopygia_guttata
ENSLACG00000014728	SFPQ	90	63.492	ENSTRUG00000003783	sfpq	62	76.267	Takifugu_rubripes
ENSLACG00000014728	SFPQ	70	75.520	ENSTNIG00000011331	sfpq	71	75.520	Tetraodon_nigroviridis
ENSLACG00000014728	SFPQ	57	84.231	ENSTBEG00000006238	SFPQ	57	84.556	Tupaia_belangeri
ENSLACG00000014728	SFPQ	70	78.935	ENSTTRG00000013930	SFPQ	62	73.973	Tursiops_truncatus
ENSLACG00000014728	SFPQ	57	76.204	ENSUMAG00000008056	-	100	71.629	Ursus_maritimus
ENSLACG00000014728	SFPQ	67	71.948	ENSVPAG00000006960	-	61	70.762	Vicugna_pacos
ENSLACG00000014728	SFPQ	57	69.688	ENSVVUG00000000874	-	100	64.888	Vulpes_vulpes
ENSLACG00000014728	SFPQ	94	62.162	ENSXETG00000009682	sfpq	98	79.944	Xenopus_tropicalis
ENSLACG00000014728	SFPQ	93	58.101	ENSXMAG00000016391	sfpq	58	69.674	Xiphophorus_maculatus