EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000014848 (Gene tree)
Gene ID: 102352219
Gene Symbol: RPP40
Alias: RNASEP1|bA428J1.3
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 46474 bases
Position: chrJH126908.1:1113306-1159779
Accession: 102352219
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000016856	Ribonuc_P_40	PF08584.11	2.2e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000016975	RPP40-201	3920	XM_005996955	ENSLACP00000016856	361 (aa)	XP_005997017	H3B4N5

Gene Model

Click here to download ENSLACG00000014848's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03008	Ribosome biogenesis in eukaryotes	KEGG
lcm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000014848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000014848	RPP40	99	59.444	ENSG00000124787	RPP40	99	59.444	Homo_sapiens
ENSLACG00000014848	RPP40	89	31.988	ENSAPOG00000008660	rpp40	92	31.988	Acanthochromis_polyacanthus
ENSLACG00000014848	RPP40	99	59.167	ENSAMEG00000012938	RPP40	99	59.167	Ailuropoda_melanoleuca
ENSLACG00000014848	RPP40	99	38.162	ENSACIG00000003617	rpp40	99	38.162	Amphilophus_citrinellus
ENSLACG00000014848	RPP40	100	40.166	ENSAOCG00000011846	rpp40	100	40.166	Amphiprion_ocellaris
ENSLACG00000014848	RPP40	100	40.166	ENSAPEG00000001322	rpp40	100	40.166	Amphiprion_percula
ENSLACG00000014848	RPP40	100	41.598	ENSATEG00000006584	rpp40	100	41.598	Anabas_testudineus
ENSLACG00000014848	RPP40	83	65.101	ENSAPLG00000005691	RPP40	98	65.101	Anas_platyrhynchos
ENSLACG00000014848	RPP40	99	60.955	ENSACAG00000006550	RPP40	87	60.955	Anolis_carolinensis
ENSLACG00000014848	RPP40	99	57.778	ENSANAG00000029246	RPP40	99	57.778	Aotus_nancymaae
ENSLACG00000014848	RPP40	97	40.286	ENSACLG00000015883	rpp40	95	40.286	Astatotilapia_calliptera
ENSLACG00000014848	RPP40	99	51.397	ENSAMXG00000001755	rpp40	99	51.397	Astyanax_mexicanus
ENSLACG00000014848	RPP40	99	57.778	ENSBTAG00000003332	RPP40	99	57.778	Bos_taurus
ENSLACG00000014848	RPP40	99	59.444	ENSCJAG00000021373	RPP40	99	59.444	Callithrix_jacchus
ENSLACG00000014848	RPP40	99	59.444	ENSCAFG00000009435	RPP40	99	59.444	Canis_familiaris
ENSLACG00000014848	RPP40	99	59.444	ENSCAFG00020013380	RPP40	99	59.444	Canis_lupus_dingo
ENSLACG00000014848	RPP40	99	58.056	ENSCHIG00000016849	RPP40	99	58.056	Capra_hircus
ENSLACG00000014848	RPP40	99	60.000	ENSTSYG00000032857	RPP40	99	60.000	Carlito_syrichta
ENSLACG00000014848	RPP40	89	55.901	ENSCAPG00000004957	RPP40	96	55.901	Cavia_aperea
ENSLACG00000014848	RPP40	99	61.389	ENSCPOG00000005855	RPP40	99	61.389	Cavia_porcellus
ENSLACG00000014848	RPP40	99	58.889	ENSCCAG00000019809	RPP40	99	58.889	Cebus_capucinus
ENSLACG00000014848	RPP40	99	58.333	ENSCATG00000038787	RPP40	99	58.333	Cercocebus_atys
ENSLACG00000014848	RPP40	99	59.722	ENSCLAG00000003235	RPP40	99	59.722	Chinchilla_lanigera
ENSLACG00000014848	RPP40	99	58.611	ENSCSAG00000007307	RPP40	99	58.611	Chlorocebus_sabaeus
ENSLACG00000014848	RPP40	69	48.800	ENSCHOG00000005856	-	100	48.800	Choloepus_hoffmanni
ENSLACG00000014848	RPP40	99	62.778	ENSCPBG00000009003	RPP40	99	62.778	Chrysemys_picta_bellii
ENSLACG00000014848	RPP40	99	58.889	ENSCANG00000033965	RPP40	99	58.889	Colobus_angolensis_palliatus
ENSLACG00000014848	RPP40	99	58.889	ENSCGRG00001018328	Rpp40	99	58.889	Cricetulus_griseus_chok1gshd
ENSLACG00000014848	RPP40	99	58.889	ENSCGRG00000011344	Rpp40	99	58.889	Cricetulus_griseus_crigri
ENSLACG00000014848	RPP40	100	36.740	ENSCSEG00000015006	-	100	36.740	Cynoglossus_semilaevis
ENSLACG00000014848	RPP40	75	36.630	ENSCVAG00000012169	rpp40	100	36.630	Cyprinodon_variegatus
ENSLACG00000014848	RPP40	100	51.381	ENSDARG00000017605	rpp40	100	51.381	Danio_rerio
ENSLACG00000014848	RPP40	81	54.422	ENSDNOG00000048136	RPP40	99	54.422	Dasypus_novemcinctus
ENSLACG00000014848	RPP40	99	58.056	ENSDORG00000029944	-	99	58.056	Dipodomys_ordii
ENSLACG00000014848	RPP40	99	46.995	ENSDORG00000011196	-	99	46.995	Dipodomys_ordii
ENSLACG00000014848	RPP40	99	47.222	ENSETEG00000007458	RPP40	99	47.222	Echinops_telfairi
ENSLACG00000014848	RPP40	98	43.380	ENSEBUG00000000386	rpp40	99	43.017	Eptatretus_burgeri
ENSLACG00000014848	RPP40	99	57.500	ENSEASG00005012116	RPP40	79	57.500	Equus_asinus_asinus
ENSLACG00000014848	RPP40	99	57.778	ENSECAG00000017247	RPP40	79	57.778	Equus_caballus
ENSLACG00000014848	RPP40	80	42.069	ENSEEUG00000012087	RPP40	98	42.069	Erinaceus_europaeus
ENSLACG00000014848	RPP40	100	51.515	ENSELUG00000017004	rpp40	100	51.515	Esox_lucius
ENSLACG00000014848	RPP40	99	58.056	ENSFCAG00000009249	RPP40	99	58.056	Felis_catus
ENSLACG00000014848	RPP40	86	58.896	ENSFALG00000013166	RPP40	99	58.896	Ficedula_albicollis
ENSLACG00000014848	RPP40	99	60.278	ENSFDAG00000013001	-	99	60.278	Fukomys_damarensis
ENSLACG00000014848	RPP40	81	48.110	ENSFDAG00000000265	-	99	48.110	Fukomys_damarensis
ENSLACG00000014848	RPP40	100	42.659	ENSFHEG00000021429	rpp40	89	42.659	Fundulus_heteroclitus
ENSLACG00000014848	RPP40	89	40.373	ENSGMOG00000018653	rpp40	100	40.994	Gadus_morhua
ENSLACG00000014848	RPP40	99	61.111	ENSGALG00000036074	RPP40	99	61.111	Gallus_gallus
ENSLACG00000014848	RPP40	83	34.899	ENSGAFG00000004189	-	98	34.899	Gambusia_affinis
ENSLACG00000014848	RPP40	100	41.274	ENSGACG00000002472	rpp40	100	40.997	Gasterosteus_aculeatus
ENSLACG00000014848	RPP40	99	63.056	ENSGAGG00000012918	RPP40	99	63.056	Gopherus_agassizii
ENSLACG00000014848	RPP40	99	59.444	ENSGGOG00000013764	RPP40	99	59.444	Gorilla_gorilla
ENSLACG00000014848	RPP40	91	37.879	ENSHBUG00000009378	rpp40	93	37.879	Haplochromis_burtoni
ENSLACG00000014848	RPP40	99	59.444	ENSHGLG00000004871	RPP40	99	59.444	Heterocephalus_glaber_female
ENSLACG00000014848	RPP40	99	59.444	ENSHGLG00100002080	RPP40	99	59.444	Heterocephalus_glaber_male
ENSLACG00000014848	RPP40	94	34.795	ENSHCOG00000013264	-	91	34.795	Hippocampus_comes
ENSLACG00000014848	RPP40	100	49.584	ENSIPUG00000008951	RPP40	100	49.584	Ictalurus_punctatus
ENSLACG00000014848	RPP40	99	59.167	ENSSTOG00000011199	RPP40	99	59.167	Ictidomys_tridecemlineatus
ENSLACG00000014848	RPP40	99	55.556	ENSJJAG00000020629	Rpp40	99	55.556	Jaculus_jaculus
ENSLACG00000014848	RPP40	100	39.058	ENSKMAG00000019358	rpp40	100	39.058	Kryptolebias_marmoratus
ENSLACG00000014848	RPP40	100	42.659	ENSLBEG00000022724	rpp40	100	42.382	Labrus_bergylta
ENSLACG00000014848	RPP40	100	60.111	ENSLOCG00000011650	rpp40	99	60.111	Lepisosteus_oculatus
ENSLACG00000014848	RPP40	83	58.389	ENSLAFG00000007530	RPP40	98	58.389	Loxodonta_africana
ENSLACG00000014848	RPP40	99	58.611	ENSMFAG00000043100	RPP40	99	58.611	Macaca_fascicularis
ENSLACG00000014848	RPP40	99	58.611	ENSMMUG00000004966	RPP40	99	58.611	Macaca_mulatta
ENSLACG00000014848	RPP40	99	58.889	ENSMNEG00000041986	RPP40	99	58.889	Macaca_nemestrina
ENSLACG00000014848	RPP40	99	53.501	ENSMLEG00000040851	RPP40	100	63.107	Mandrillus_leucophaeus
ENSLACG00000014848	RPP40	100	40.166	ENSMAMG00000019551	rpp40	99	40.166	Mastacembelus_armatus
ENSLACG00000014848	RPP40	99	40.616	ENSMZEG00005019475	rpp40	99	40.616	Maylandia_zebra
ENSLACG00000014848	RPP40	98	60.000	ENSMGAG00000004009	RPP40	98	60.000	Meleagris_gallopavo
ENSLACG00000014848	RPP40	99	59.722	ENSMAUG00000010268	Rpp40	99	59.722	Mesocricetus_auratus
ENSLACG00000014848	RPP40	99	59.167	ENSMICG00000003297	RPP40	99	55.000	Microcebus_murinus
ENSLACG00000014848	RPP40	99	58.889	ENSMOCG00000000305	Rpp40	99	58.889	Microtus_ochrogaster
ENSLACG00000014848	RPP40	100	34.626	ENSMMOG00000020591	-	100	34.626	Mola_mola
ENSLACG00000014848	RPP40	99	60.942	ENSMODG00000009826	RPP40	99	60.942	Monodelphis_domestica
ENSLACG00000014848	RPP40	100	40.997	ENSMALG00000020133	rpp40	100	40.997	Monopterus_albus
ENSLACG00000014848	RPP40	99	59.722	MGP_CAROLIEiJ_G0018429	Rpp40	78	81.538	Mus_caroli
ENSLACG00000014848	RPP40	99	60.278	ENSMUSG00000021418	Rpp40	99	60.278	Mus_musculus
ENSLACG00000014848	RPP40	99	60.000	MGP_PahariEiJ_G0019497	Rpp40	78	81.538	Mus_pahari
ENSLACG00000014848	RPP40	99	60.000	MGP_SPRETEiJ_G0019309	Rpp40	78	81.538	Mus_spretus
ENSLACG00000014848	RPP40	99	58.611	ENSMPUG00000000530	RPP40	93	58.611	Mustela_putorius_furo
ENSLACG00000014848	RPP40	99	58.889	ENSMLUG00000000501	RPP40	99	58.889	Myotis_lucifugus
ENSLACG00000014848	RPP40	99	59.444	ENSNGAG00000023955	-	99	59.444	Nannospalax_galili
ENSLACG00000014848	RPP40	95	52.770	ENSNGAG00000022529	-	99	52.770	Nannospalax_galili
ENSLACG00000014848	RPP40	88	36.533	ENSNBRG00000017465	rpp40	86	36.391	Neolamprologus_brichardi
ENSLACG00000014848	RPP40	99	59.167	ENSNLEG00000034397	RPP40	99	59.167	Nomascus_leucogenys
ENSLACG00000014848	RPP40	99	56.389	ENSMEUG00000005300	RPP40	99	56.389	Notamacropus_eugenii
ENSLACG00000014848	RPP40	99	56.022	ENSODEG00000018153	-	98	56.022	Octodon_degus
ENSLACG00000014848	RPP40	89	55.280	ENSODEG00000006170	-	100	55.280	Octodon_degus
ENSLACG00000014848	RPP40	100	59.557	ENSODEG00000007255	-	99	59.557	Octodon_degus
ENSLACG00000014848	RPP40	99	41.176	ENSONIG00000014016	rpp40	98	41.176	Oreochromis_niloticus
ENSLACG00000014848	RPP40	83	63.880	ENSOANG00000001200	RPP40	98	63.880	Ornithorhynchus_anatinus
ENSLACG00000014848	RPP40	99	54.749	ENSOCUG00000000354	RPP40	99	54.749	Oryctolagus_cuniculus
ENSLACG00000014848	RPP40	99	41.828	ENSORLG00000008242	-	99	41.828	Oryzias_latipes
ENSLACG00000014848	RPP40	99	41.274	ENSORLG00020013745	-	90	41.274	Oryzias_latipes_hni
ENSLACG00000014848	RPP40	99	41.551	ENSORLG00015000887	-	99	41.551	Oryzias_latipes_hsok
ENSLACG00000014848	RPP40	99	41.783	ENSOMEG00000002747	rpp40	99	41.783	Oryzias_melastigma
ENSLACG00000014848	RPP40	99	59.722	ENSOGAG00000006055	RPP40	99	59.722	Otolemur_garnettii
ENSLACG00000014848	RPP40	89	56.790	ENSOARG00000018783	RPP40	98	58.389	Ovis_aries
ENSLACG00000014848	RPP40	99	59.167	ENSPPAG00000023703	RPP40	99	59.167	Pan_paniscus
ENSLACG00000014848	RPP40	99	58.056	ENSPPRG00000005612	RPP40	99	58.056	Panthera_pardus
ENSLACG00000014848	RPP40	99	54.722	ENSPTIG00000018847	RPP40	99	54.722	Panthera_tigris_altaica
ENSLACG00000014848	RPP40	99	58.611	ENSPTRG00000017690	RPP40	99	58.611	Pan_troglodytes
ENSLACG00000014848	RPP40	99	59.167	ENSPANG00000017865	RPP40	99	59.167	Papio_anubis
ENSLACG00000014848	RPP40	99	52.514	ENSPKIG00000006311	rpp40	99	52.514	Paramormyrops_kingsleyae
ENSLACG00000014848	RPP40	61	64.253	ENSPSIG00000007854	RPP40	99	64.253	Pelodiscus_sinensis
ENSLACG00000014848	RPP40	93	53.412	ENSPEMG00000020809	Rpp40	91	53.412	Peromyscus_maniculatus_bairdii
ENSLACG00000014848	RPP40	76	51.095	ENSPMAG00000008412	rpp40	99	51.095	Petromyzon_marinus
ENSLACG00000014848	RPP40	99	62.500	ENSPCIG00000010682	RPP40	99	62.500	Phascolarctos_cinereus
ENSLACG00000014848	RPP40	100	38.567	ENSPFOG00000011460	rpp40	99	38.567	Poecilia_formosa
ENSLACG00000014848	RPP40	100	38.227	ENSPLAG00000001334	rpp40	100	38.227	Poecilia_latipinna
ENSLACG00000014848	RPP40	100	39.058	ENSPMEG00000007721	rpp40	100	39.058	Poecilia_mexicana
ENSLACG00000014848	RPP40	100	39.612	ENSPREG00000009215	rpp40	100	39.612	Poecilia_reticulata
ENSLACG00000014848	RPP40	99	59.167	ENSPPYG00000016194	RPP40	99	59.167	Pongo_abelii
ENSLACG00000014848	RPP40	51	53.552	ENSPCAG00000002700	-	98	53.552	Procavia_capensis
ENSLACG00000014848	RPP40	99	59.167	ENSPCOG00000003907	RPP40	99	59.167	Propithecus_coquereli
ENSLACG00000014848	RPP40	99	57.778	ENSPVAG00000011325	RPP40	99	57.778	Pteropus_vampyrus
ENSLACG00000014848	RPP40	84	37.086	ENSPNYG00000004432	rpp40	99	37.086	Pundamilia_nyererei
ENSLACG00000014848	RPP40	99	49.582	ENSPNAG00000019125	rpp40	99	49.582	Pygocentrus_nattereri
ENSLACG00000014848	RPP40	99	59.444	ENSRNOG00000016226	Rpp40	99	59.444	Rattus_norvegicus
ENSLACG00000014848	RPP40	99	58.889	ENSRBIG00000035800	RPP40	99	58.889	Rhinopithecus_bieti
ENSLACG00000014848	RPP40	99	58.889	ENSRROG00000039116	RPP40	99	58.889	Rhinopithecus_roxellana
ENSLACG00000014848	RPP40	99	58.333	ENSSBOG00000020297	RPP40	99	58.333	Saimiri_boliviensis_boliviensis
ENSLACG00000014848	RPP40	77	61.511	ENSSHAG00000002102	RPP40	100	61.511	Sarcophilus_harrisii
ENSLACG00000014848	RPP40	100	54.696	ENSSFOG00015001142	rpp40	81	54.696	Scleropages_formosus
ENSLACG00000014848	RPP40	100	41.551	ENSSDUG00000007202	rpp40	100	41.551	Seriola_dumerili
ENSLACG00000014848	RPP40	100	41.274	ENSSLDG00000017563	rpp40	100	41.274	Seriola_lalandi_dorsalis
ENSLACG00000014848	RPP40	82	61.017	ENSSPUG00000018950	-	100	61.017	Sphenodon_punctatus
ENSLACG00000014848	RPP40	99	60.278	ENSSPUG00000017487	-	99	60.278	Sphenodon_punctatus
ENSLACG00000014848	RPP40	100	41.274	ENSSPAG00000022716	rpp40	100	41.274	Stegastes_partitus
ENSLACG00000014848	RPP40	99	58.611	ENSSSCG00000000998	RPP40	99	58.611	Sus_scrofa
ENSLACG00000014848	RPP40	99	59.218	ENSTGUG00000002258	-	100	59.218	Taeniopygia_guttata
ENSLACG00000014848	RPP40	99	40.278	ENSTRUG00000003755	rpp40	100	40.278	Takifugu_rubripes
ENSLACG00000014848	RPP40	100	39.335	ENSTNIG00000003077	rpp40	100	39.335	Tetraodon_nigroviridis
ENSLACG00000014848	RPP40	69	42.400	ENSTBEG00000014467	-	73	42.400	Tupaia_belangeri
ENSLACG00000014848	RPP40	100	54.571	ENSTTRG00000007319	RPP40	99	54.571	Tursiops_truncatus
ENSLACG00000014848	RPP40	99	58.889	ENSUAMG00000002159	RPP40	99	58.889	Ursus_americanus
ENSLACG00000014848	RPP40	99	58.889	ENSUMAG00000018639	RPP40	93	58.889	Ursus_maritimus
ENSLACG00000014848	RPP40	79	39.649	ENSVPAG00000004652	-	96	39.649	Vicugna_pacos
ENSLACG00000014848	RPP40	99	59.722	ENSVVUG00000005451	RPP40	99	59.722	Vulpes_vulpes
ENSLACG00000014848	RPP40	100	54.121	ENSXETG00000017617	rpp40	100	53.186	Xenopus_tropicalis
ENSLACG00000014848	RPP40	57	43.411	ENSXCOG00000019991	-	61	43.411	Xiphophorus_couchianus
ENSLACG00000014848	RPP40	100	32.240	ENSXMAG00000024940	rpp40	99	32.240	Xiphophorus_maculatus