EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000014884 (Gene tree)
Gene ID: 102346455
Gene Symbol: nop16
Alias: zgc:92910
Full Name: NOP16 nucleolar protein
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 7625 bases
Position: chrJH126722.1:1122636-1130260
Accession: 102346455
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000016898	Nop16	PF09420.10	1.7e-22	1	2
ENSLACP00000016898	Nop16	PF09420.10	1.7e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000017017	-	2096	XM_005993374	ENSLACP00000016898	177 (aa)	XP_005993436	H3B4S7

Gene Model

Click here to download ENSLACG00000014884's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000014884's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000014884	nop16	99	57.143	ENSAPOG00000010682	-	96	58.235	Acanthochromis_polyacanthus
ENSLACG00000014884	nop16	100	63.842	ENSAMEG00000006988	-	99	63.842	Ailuropoda_melanoleuca
ENSLACG00000014884	nop16	96	60.000	ENSACIG00000019263	nop16	95	60.000	Amphilophus_citrinellus
ENSLACG00000014884	nop16	99	57.143	ENSAOCG00000005504	nop16	99	57.143	Amphiprion_ocellaris
ENSLACG00000014884	nop16	99	57.143	ENSAPEG00000006605	nop16	99	57.143	Amphiprion_percula
ENSLACG00000014884	nop16	96	61.765	ENSATEG00000014089	nop16	95	61.765	Anabas_testudineus
ENSLACG00000014884	nop16	99	66.477	ENSACAG00000006333	-	99	66.477	Anolis_carolinensis
ENSLACG00000014884	nop16	100	59.322	ENSANAG00000015743	-	99	59.322	Aotus_nancymaae
ENSLACG00000014884	nop16	100	54.237	ENSANAG00000027410	-	99	54.237	Aotus_nancymaae
ENSLACG00000014884	nop16	96	59.412	ENSACLG00000025227	nop16	95	59.412	Astatotilapia_calliptera
ENSLACG00000014884	nop16	94	50.299	ENSAMXG00000006843	nop16	95	50.299	Astyanax_mexicanus
ENSLACG00000014884	nop16	100	63.277	ENSBTAG00000010734	NOP16	99	63.277	Bos_taurus
ENSLACG00000014884	nop16	100	62.712	ENSCAFG00000016694	NOP16	99	62.712	Canis_familiaris
ENSLACG00000014884	nop16	99	63.068	ENSCAFG00020011505	-	94	63.068	Canis_lupus_dingo
ENSLACG00000014884	nop16	100	63.277	ENSCHIG00000022082	-	99	63.277	Capra_hircus
ENSLACG00000014884	nop16	100	62.712	ENSTSYG00000030409	-	99	62.712	Carlito_syrichta
ENSLACG00000014884	nop16	100	51.977	ENSTSYG00000032690	-	99	51.977	Carlito_syrichta
ENSLACG00000014884	nop16	100	61.582	ENSCPOG00000026072	-	99	61.582	Cavia_porcellus
ENSLACG00000014884	nop16	91	61.491	ENSCCAG00000026775	-	94	61.491	Cebus_capucinus
ENSLACG00000014884	nop16	99	60.795	ENSCLAG00000015405	-	99	60.795	Chinchilla_lanigera
ENSLACG00000014884	nop16	100	62.712	ENSCSAG00000009400	-	99	62.712	Chlorocebus_sabaeus
ENSLACG00000014884	nop16	99	65.730	ENSCPBG00000022647	-	99	65.730	Chrysemys_picta_bellii
ENSLACG00000014884	nop16	99	39.444	ENSCING00000006179	-	97	39.444	Ciona_intestinalis
ENSLACG00000014884	nop16	98	42.529	ENSCSAVG00000000269	-	95	42.529	Ciona_savignyi
ENSLACG00000014884	nop16	100	64.407	ENSCGRG00001004259	Nop16	99	64.407	Cricetulus_griseus_chok1gshd
ENSLACG00000014884	nop16	100	64.407	ENSCGRG00000010975	Nop16	99	64.407	Cricetulus_griseus_crigri
ENSLACG00000014884	nop16	96	54.706	ENSCSEG00000020523	nop16	97	54.706	Cynoglossus_semilaevis
ENSLACG00000014884	nop16	96	62.353	ENSCVAG00000020140	nop16	95	62.353	Cyprinodon_variegatus
ENSLACG00000014884	nop16	98	51.412	ENSDARG00000044402	nop16	99	52.000	Danio_rerio
ENSLACG00000014884	nop16	100	63.842	ENSDNOG00000042890	-	99	63.842	Dasypus_novemcinctus
ENSLACG00000014884	nop16	100	64.407	ENSDORG00000008872	Nop16	99	64.407	Dipodomys_ordii
ENSLACG00000014884	nop16	94	44.186	ENSEBUG00000011196	nop16	98	43.017	Eptatretus_burgeri
ENSLACG00000014884	nop16	100	63.277	ENSEASG00005011988	-	99	63.277	Equus_asinus_asinus
ENSLACG00000014884	nop16	100	63.277	ENSECAG00000021354	NOP16	99	63.277	Equus_caballus
ENSLACG00000014884	nop16	98	60.571	ENSELUG00000000401	nop16	98	60.571	Esox_lucius
ENSLACG00000014884	nop16	100	63.277	ENSFCAG00000025473	-	99	63.277	Felis_catus
ENSLACG00000014884	nop16	100	58.989	ENSFALG00000008553	-	99	58.989	Ficedula_albicollis
ENSLACG00000014884	nop16	100	60.452	ENSFDAG00000000193	-	99	60.452	Fukomys_damarensis
ENSLACG00000014884	nop16	96	61.765	ENSFHEG00000016452	nop16	95	61.765	Fundulus_heteroclitus
ENSLACG00000014884	nop16	100	63.687	ENSGALG00000003355	-	99	63.687	Gallus_gallus
ENSLACG00000014884	nop16	84	56.376	ENSGAFG00000011616	nop16	74	59.854	Gambusia_affinis
ENSLACG00000014884	nop16	96	57.647	ENSGACG00000002618	-	98	57.647	Gasterosteus_aculeatus
ENSLACG00000014884	nop16	96	54.913	ENSGACG00000003122	-	97	58.261	Gasterosteus_aculeatus
ENSLACG00000014884	nop16	96	56.471	ENSGACG00000020819	-	98	56.471	Gasterosteus_aculeatus
ENSLACG00000014884	nop16	96	53.529	ENSGACG00000020810	nop16	100	53.529	Gasterosteus_aculeatus
ENSLACG00000014884	nop16	96	58.824	ENSHBUG00000013527	nop16	95	58.824	Haplochromis_burtoni
ENSLACG00000014884	nop16	100	61.017	ENSHGLG00000013437	NOP16	99	61.017	Heterocephalus_glaber_female
ENSLACG00000014884	nop16	100	61.017	ENSHGLG00100011375	NOP16	99	61.017	Heterocephalus_glaber_male
ENSLACG00000014884	nop16	96	55.882	ENSHCOG00000019999	nop16	97	55.882	Hippocampus_comes
ENSLACG00000014884	nop16	96	50.867	ENSIPUG00000006682	nop16	96	50.867	Ictalurus_punctatus
ENSLACG00000014884	nop16	100	63.687	ENSSTOG00000004869	-	99	63.687	Ictidomys_tridecemlineatus
ENSLACG00000014884	nop16	100	63.277	ENSJJAG00000017655	Nop16	99	63.277	Jaculus_jaculus
ENSLACG00000014884	nop16	96	57.059	ENSKMAG00000006164	nop16	95	57.059	Kryptolebias_marmoratus
ENSLACG00000014884	nop16	98	58.621	ENSLBEG00000018355	nop16	78	59.412	Labrus_bergylta
ENSLACG00000014884	nop16	99	67.045	ENSLOCG00000012348	nop16	98	67.045	Lepisosteus_oculatus
ENSLACG00000014884	nop16	100	62.712	ENSLAFG00000017886	-	99	62.712	Loxodonta_africana
ENSLACG00000014884	nop16	96	59.412	ENSMAMG00000021868	nop16	95	59.412	Mastacembelus_armatus
ENSLACG00000014884	nop16	96	59.412	ENSMZEG00005012112	nop16	95	59.412	Maylandia_zebra
ENSLACG00000014884	nop16	57	64.356	ENSMGAG00000004726	-	99	64.356	Meleagris_gallopavo
ENSLACG00000014884	nop16	58	65.686	ENSMAUG00000009852	-	96	65.686	Mesocricetus_auratus
ENSLACG00000014884	nop16	94	58.683	ENSMAUG00000015569	-	99	58.683	Mesocricetus_auratus
ENSLACG00000014884	nop16	100	63.842	ENSMOCG00000020788	Nop16	99	63.842	Microtus_ochrogaster
ENSLACG00000014884	nop16	96	62.353	ENSMMOG00000016054	nop16	99	62.353	Mola_mola
ENSLACG00000014884	nop16	100	66.292	ENSMODG00000005214	-	99	66.292	Monodelphis_domestica
ENSLACG00000014884	nop16	96	58.824	ENSMALG00000021263	nop16	95	58.824	Monopterus_albus
ENSLACG00000014884	nop16	100	63.277	MGP_CAROLIEiJ_G0018538	Nop16	99	63.277	Mus_caroli
ENSLACG00000014884	nop16	100	63.842	ENSMUSG00000025869	Nop16	99	63.842	Mus_musculus
ENSLACG00000014884	nop16	100	63.842	MGP_PahariEiJ_G0019603	Nop16	99	63.842	Mus_pahari
ENSLACG00000014884	nop16	100	63.842	MGP_SPRETEiJ_G0019418	Nop16	99	63.842	Mus_spretus
ENSLACG00000014884	nop16	100	63.842	ENSMPUG00000012552	-	99	63.842	Mustela_putorius_furo
ENSLACG00000014884	nop16	100	63.277	ENSMPUG00000016964	-	99	63.277	Mustela_putorius_furo
ENSLACG00000014884	nop16	100	61.582	ENSMLUG00000003504	-	99	61.582	Myotis_lucifugus
ENSLACG00000014884	nop16	100	63.277	ENSNGAG00000018045	Nop16	99	63.277	Nannospalax_galili
ENSLACG00000014884	nop16	97	58.721	ENSNBRG00000015181	nop16	98	58.721	Neolamprologus_brichardi
ENSLACG00000014884	nop16	100	61.017	ENSODEG00000009586	-	99	61.017	Octodon_degus
ENSLACG00000014884	nop16	96	60.000	ENSONIG00000016417	nop16	95	60.000	Oreochromis_niloticus
ENSLACG00000014884	nop16	100	63.277	ENSOCUG00000013171	-	99	63.277	Oryctolagus_cuniculus
ENSLACG00000014884	nop16	96	58.824	ENSORLG00000026611	nop16	95	58.824	Oryzias_latipes
ENSLACG00000014884	nop16	96	62.353	ENSOMEG00000023001	nop16	95	62.353	Oryzias_melastigma
ENSLACG00000014884	nop16	100	63.277	ENSOGAG00000000824	-	99	63.277	Otolemur_garnettii
ENSLACG00000014884	nop16	100	63.277	ENSOARG00000002165	-	99	63.277	Ovis_aries
ENSLACG00000014884	nop16	100	62.147	ENSPPAG00000035473	-	99	62.147	Pan_paniscus
ENSLACG00000014884	nop16	100	63.277	ENSPPRG00000016600	-	99	63.277	Panthera_pardus
ENSLACG00000014884	nop16	100	63.277	ENSPTIG00000011708	-	99	63.277	Panthera_tigris_altaica
ENSLACG00000014884	nop16	100	62.147	ENSPTRG00000017560	NOP16	99	62.147	Pan_troglodytes
ENSLACG00000014884	nop16	100	56.497	ENSPKIG00000009587	nop16	99	56.497	Paramormyrops_kingsleyae
ENSLACG00000014884	nop16	79	61.972	ENSPSIG00000013546	-	99	61.972	Pelodiscus_sinensis
ENSLACG00000014884	nop16	94	63.905	ENSPMGG00000003443	nop16	98	63.905	Periophthalmus_magnuspinnatus
ENSLACG00000014884	nop16	100	63.842	ENSPEMG00000020268	Nop16	99	63.842	Peromyscus_maniculatus_bairdii
ENSLACG00000014884	nop16	98	66.286	ENSPCIG00000009782	-	98	66.286	Phascolarctos_cinereus
ENSLACG00000014884	nop16	96	60.000	ENSPFOG00000010549	nop16	95	60.000	Poecilia_formosa
ENSLACG00000014884	nop16	77	57.664	ENSPLAG00000007124	nop16	70	57.664	Poecilia_latipinna
ENSLACG00000014884	nop16	96	60.000	ENSPMEG00000008611	nop16	95	60.000	Poecilia_mexicana
ENSLACG00000014884	nop16	96	60.000	ENSPREG00000012940	nop16	95	60.000	Poecilia_reticulata
ENSLACG00000014884	nop16	100	62.147	ENSPPYG00000016070	-	99	62.147	Pongo_abelii
ENSLACG00000014884	nop16	96	59.412	ENSPNYG00000013529	nop16	95	59.412	Pundamilia_nyererei
ENSLACG00000014884	nop16	95	51.462	ENSPNAG00000016233	nop16	98	51.462	Pygocentrus_nattereri
ENSLACG00000014884	nop16	100	63.277	ENSRNOG00000017284	Nop16	99	63.277	Rattus_norvegicus
ENSLACG00000014884	nop16	100	66.854	ENSSHAG00000001724	-	99	66.854	Sarcophilus_harrisii
ENSLACG00000014884	nop16	92	60.736	ENSSFOG00015010537	nop16	77	60.465	Scleropages_formosus
ENSLACG00000014884	nop16	96	60.588	ENSSDUG00000022349	nop16	95	60.588	Seriola_dumerili
ENSLACG00000014884	nop16	96	61.176	ENSSLDG00000025171	nop16	95	61.176	Seriola_lalandi_dorsalis
ENSLACG00000014884	nop16	73	58.140	ENSSARG00000006699	-	61	58.140	Sorex_araneus
ENSLACG00000014884	nop16	99	68.182	ENSSPUG00000006508	-	98	68.182	Sphenodon_punctatus
ENSLACG00000014884	nop16	96	58.235	ENSSPAG00000011772	nop16	95	58.235	Stegastes_partitus
ENSLACG00000014884	nop16	100	61.017	ENSSSCG00000029577	-	99	61.017	Sus_scrofa
ENSLACG00000014884	nop16	100	62.011	ENSTGUG00000000543	-	99	62.011	Taeniopygia_guttata
ENSLACG00000014884	nop16	96	59.412	ENSTRUG00000020255	nop16	95	59.412	Takifugu_rubripes
ENSLACG00000014884	nop16	96	60.000	ENSTNIG00000007616	nop16	95	60.000	Tetraodon_nigroviridis
ENSLACG00000014884	nop16	100	63.277	ENSUAMG00000005139	-	99	63.277	Ursus_americanus
ENSLACG00000014884	nop16	99	63.068	ENSVVUG00000001697	-	94	63.068	Vulpes_vulpes
ENSLACG00000014884	nop16	92	55.828	ENSXETG00000022342	nop16	95	55.828	Xenopus_tropicalis
ENSLACG00000014884	nop16	96	60.588	ENSXCOG00000018829	nop16	97	60.588	Xiphophorus_couchianus
ENSLACG00000014884	nop16	96	60.588	ENSXMAG00000029113	nop16	95	60.588	Xiphophorus_maculatus