EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000014947 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 4541 bases
Position: chrJH127035.1:1134899-1139439
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000016972	RVT_1	PF00078.27	1.7e-11	1	1
ENSLACP00000016973	RVT_1	PF00078.27	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000017093	-	2667	-	ENSLACP00000016973	889 (aa)	-	H3B502
ENSLACT00000017092	-	3321	-	ENSLACP00000016972	1107 (aa)	-	H3B501

Gene Model

Click here to download ENSLACG00000014947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000014947's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000014947	-	85	32.873	ENSLACG00000010367	-	99	34.958
ENSLACG00000014947	-	75	33.375	ENSLACG00000010862	-	96	33.497
ENSLACG00000014947	-	71	35.185	ENSLACG00000007131	-	98	34.483
ENSLACG00000014947	-	52	33.816	ENSLACG00000016284	-	100	41.667
ENSLACG00000014947	-	50	65.397	ENSLACG00000002169	-	95	65.385
ENSLACG00000014947	-	53	36.434	ENSLACG00000001186	-	99	34.059
ENSLACG00000014947	-	56	33.231	ENSLACG00000010776	-	99	42.105
ENSLACG00000014947	-	52	33.333	ENSLACG00000017143	-	96	33.655
ENSLACG00000014947	-	63	31.624	ENSLACG00000009168	-	92	31.624
ENSLACG00000014947	-	89	35.417	ENSLACG00000003314	-	96	35.133

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000014947	-	70	41.141	ENSAPOG00000021580	-	90	41.141	Acanthochromis_polyacanthus
ENSLACG00000014947	-	95	43.844	ENSAPOG00000007435	-	92	37.241	Acanthochromis_polyacanthus
ENSLACG00000014947	-	71	51.627	ENSAPOG00000012937	-	92	51.484	Acanthochromis_polyacanthus
ENSLACG00000014947	-	72	38.053	ENSACLG00000004748	-	91	36.375	Astatotilapia_calliptera
ENSLACG00000014947	-	97	38.201	ENSACLG00000002243	-	93	33.811	Astatotilapia_calliptera
ENSLACG00000014947	-	71	38.039	ENSACLG00000027124	-	91	38.039	Astatotilapia_calliptera
ENSLACG00000014947	-	98	40.708	ENSACLG00000016675	-	93	34.243	Astatotilapia_calliptera
ENSLACG00000014947	-	86	43.308	ENSACLG00000002238	-	94	37.309	Astatotilapia_calliptera
ENSLACG00000014947	-	97	43.953	ENSACLG00000002872	-	93	37.332	Astatotilapia_calliptera
ENSLACG00000014947	-	97	43.953	ENSACLG00000018325	-	93	37.411	Astatotilapia_calliptera
ENSLACG00000014947	-	75	37.762	ENSACLG00000005909	-	87	37.762	Astatotilapia_calliptera
ENSLACG00000014947	-	96	41.617	ENSCSEG00000010440	-	92	34.628	Cynoglossus_semilaevis
ENSLACG00000014947	-	97	44.993	ENSFHEG00000022554	-	88	39.862	Fundulus_heteroclitus
ENSLACG00000014947	-	71	43.704	ENSONIG00000020960	-	88	43.704	Oreochromis_niloticus
ENSLACG00000014947	-	83	36.837	ENSOMEG00000023951	-	88	36.837	Oryzias_melastigma