EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000015192 (Gene tree)
Gene ID: 102348098
Gene Symbol: SNRPD3
Alias: SMD3|Sm-D3
Full Name: small nuclear ribonucleoprotein D3 polypeptide
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 5409 bases
Position: chrJH126570.1:1196629-1202037
Accession: 102348098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000017248	LSM	PF01423.22	3e-15	1	1
ENSLACP00000017249	LSM	PF01423.22	7.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000017375	SNRPD3-201	1121	XM_005987117	ENSLACP00000017248	126 (aa)	XP_005987179	H3B5S7
ENSLACT00000017376	SNRPD3-202	315	-	ENSLACP00000017249	104 (aa)	-	H3B5S8

Gene Model

Click here to download ENSLACG00000015192's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015192's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000015192	SNRPD3	54	30.882	ENSLACG00000015904	LSM10	52	30.882
ENSLACG00000015192	SNRPD3	56	34.722	ENSLACG00000015861	LSM4	77	32.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000015192	SNRPD3	100	99.206	ENSG00000100028	SNRPD3	100	99.206	Homo_sapiens
ENSLACG00000015192	SNRPD3	100	98.425	ENSAPOG00000007512	snrpd3l	100	98.425	Acanthochromis_polyacanthus
ENSLACG00000015192	SNRPD3	100	99.206	ENSAMEG00000013935	SNRPD3	100	99.206	Ailuropoda_melanoleuca
ENSLACG00000015192	SNRPD3	100	98.425	ENSACIG00000008871	snrpd3l	100	98.425	Amphilophus_citrinellus
ENSLACG00000015192	SNRPD3	100	98.425	ENSAOCG00000008497	SNRPD3	100	98.425	Amphiprion_ocellaris
ENSLACG00000015192	SNRPD3	84	99.057	ENSAOCG00000016759	-	98	99.057	Amphiprion_ocellaris
ENSLACG00000015192	SNRPD3	100	98.425	ENSAOCG00000022442	-	100	98.425	Amphiprion_ocellaris
ENSLACG00000015192	SNRPD3	100	98.425	ENSAOCG00000016743	snrpd3l	100	98.425	Amphiprion_ocellaris
ENSLACG00000015192	SNRPD3	84	99.057	ENSAPEG00000006260	-	98	99.057	Amphiprion_percula
ENSLACG00000015192	SNRPD3	100	98.425	ENSAPEG00000006273	snrpd3l	100	98.425	Amphiprion_percula
ENSLACG00000015192	SNRPD3	100	98.425	ENSATEG00000020556	snrpd3l	91	98.425	Anabas_testudineus
ENSLACG00000015192	SNRPD3	100	99.206	ENSAPLG00000008670	SNRPD3	100	99.206	Anas_platyrhynchos
ENSLACG00000015192	SNRPD3	100	99.206	ENSANAG00000026106	SNRPD3	100	99.206	Aotus_nancymaae
ENSLACG00000015192	SNRPD3	100	98.425	ENSACLG00000021295	snrpd3l	100	98.425	Astatotilapia_calliptera
ENSLACG00000015192	SNRPD3	100	94.531	ENSAMXG00000038984	snrpd3l	100	94.531	Astyanax_mexicanus
ENSLACG00000015192	SNRPD3	100	99.206	ENSBTAG00000021262	SNRPD3	100	99.206	Bos_taurus
ENSLACG00000015192	SNRPD3	94	61.600	WBGene00004914	snr-1	68	69.565	Caenorhabditis_elegans
ENSLACG00000015192	SNRPD3	100	99.206	ENSCJAG00000009630	SNRPD3	100	99.206	Callithrix_jacchus
ENSLACG00000015192	SNRPD3	100	98.413	ENSCAFG00000017258	-	100	98.413	Canis_familiaris
ENSLACG00000015192	SNRPD3	100	99.206	ENSCAFG00000013864	-	100	99.206	Canis_familiaris
ENSLACG00000015192	SNRPD3	100	99.206	ENSCAFG00020007165	-	100	99.206	Canis_lupus_dingo
ENSLACG00000015192	SNRPD3	68	84.507	ENSCAFG00020024699	-	58	98.333	Canis_lupus_dingo
ENSLACG00000015192	SNRPD3	100	99.206	ENSCHIG00000000057	SNRPD3	100	99.206	Capra_hircus
ENSLACG00000015192	SNRPD3	100	99.206	ENSTSYG00000007649	SNRPD3	100	99.206	Carlito_syrichta
ENSLACG00000015192	SNRPD3	100	99.206	ENSCAPG00000016432	-	100	99.206	Cavia_aperea
ENSLACG00000015192	SNRPD3	100	99.206	ENSCPOG00000033102	-	100	99.206	Cavia_porcellus
ENSLACG00000015192	SNRPD3	100	99.206	ENSCCAG00000035006	SNRPD3	100	99.206	Cebus_capucinus
ENSLACG00000015192	SNRPD3	100	99.206	ENSCATG00000038878	SNRPD3	100	99.206	Cercocebus_atys
ENSLACG00000015192	SNRPD3	100	99.206	ENSCLAG00000011403	SNRPD3	100	99.206	Chinchilla_lanigera
ENSLACG00000015192	SNRPD3	100	99.206	ENSCSAG00000010694	SNRPD3	100	99.206	Chlorocebus_sabaeus
ENSLACG00000015192	SNRPD3	100	99.206	ENSCPBG00000002065	SNRPD3	100	99.206	Chrysemys_picta_bellii
ENSLACG00000015192	SNRPD3	85	78.505	ENSCSAVG00000004708	-	80	78.505	Ciona_savignyi
ENSLACG00000015192	SNRPD3	100	99.206	ENSCANG00000032106	SNRPD3	100	99.206	Colobus_angolensis_palliatus
ENSLACG00000015192	SNRPD3	100	99.206	ENSCGRG00001021990	Snrpd3	100	99.206	Cricetulus_griseus_chok1gshd
ENSLACG00000015192	SNRPD3	100	99.206	ENSCGRG00000004280	Snrpd3	100	99.206	Cricetulus_griseus_crigri
ENSLACG00000015192	SNRPD3	100	96.850	ENSCVAG00000001276	snrpd3l	100	96.850	Cyprinodon_variegatus
ENSLACG00000015192	SNRPD3	100	89.764	ENSDARG00000013800	snrpd3	100	90.551	Danio_rerio
ENSLACG00000015192	SNRPD3	100	95.312	ENSDARG00000076283	snrpd3l	100	95.312	Danio_rerio
ENSLACG00000015192	SNRPD3	100	89.147	ENSDNOG00000018004	-	100	89.147	Dasypus_novemcinctus
ENSLACG00000015192	SNRPD3	97	77.049	ENSDNOG00000042638	-	100	77.049	Dasypus_novemcinctus
ENSLACG00000015192	SNRPD3	100	99.206	ENSDNOG00000047424	-	100	99.206	Dasypus_novemcinctus
ENSLACG00000015192	SNRPD3	87	90.909	ENSDORG00000002800	-	100	90.909	Dipodomys_ordii
ENSLACG00000015192	SNRPD3	100	74.603	ENSDORG00000027169	-	100	74.603	Dipodomys_ordii
ENSLACG00000015192	SNRPD3	100	84.127	ENSDORG00000027706	-	100	84.127	Dipodomys_ordii
ENSLACG00000015192	SNRPD3	84	83.019	FBgn0023167	SmD3	71	82.243	Drosophila_melanogaster
ENSLACG00000015192	SNRPD3	100	99.206	ENSEASG00005000273	SNRPD3	100	99.206	Equus_asinus_asinus
ENSLACG00000015192	SNRPD3	100	99.206	ENSECAG00000023316	SNRPD3	100	99.206	Equus_caballus
ENSLACG00000015192	SNRPD3	100	97.619	ENSEEUG00000015518	SNRPD3	100	97.619	Erinaceus_europaeus
ENSLACG00000015192	SNRPD3	100	96.063	ENSELUG00000001854	snrpd3	100	96.063	Esox_lucius
ENSLACG00000015192	SNRPD3	100	97.638	ENSELUG00000010092	snrpd3l	100	97.638	Esox_lucius
ENSLACG00000015192	SNRPD3	100	99.206	ENSFCAG00000001512	SNRPD3	100	99.206	Felis_catus
ENSLACG00000015192	SNRPD3	100	99.206	ENSFALG00000007303	SNRPD3	100	99.206	Ficedula_albicollis
ENSLACG00000015192	SNRPD3	100	99.206	ENSFDAG00000010772	SNRPD3	100	99.206	Fukomys_damarensis
ENSLACG00000015192	SNRPD3	100	97.638	ENSFHEG00000010754	snrpd3l	100	97.638	Fundulus_heteroclitus
ENSLACG00000015192	SNRPD3	100	97.656	ENSGMOG00000008469	snrpd3l	100	97.656	Gadus_morhua
ENSLACG00000015192	SNRPD3	100	99.206	ENSGALG00000006596	SNRPD3	100	99.206	Gallus_gallus
ENSLACG00000015192	SNRPD3	84	99.057	ENSGAFG00000006661	snrpd3l	82	99.057	Gambusia_affinis
ENSLACG00000015192	SNRPD3	100	97.656	ENSGACG00000017533	snrpd3l	100	97.656	Gasterosteus_aculeatus
ENSLACG00000015192	SNRPD3	100	99.206	ENSGAGG00000023325	SNRPD3	100	99.206	Gopherus_agassizii
ENSLACG00000015192	SNRPD3	100	99.206	ENSGGOG00000015640	SNRPD3	100	99.206	Gorilla_gorilla
ENSLACG00000015192	SNRPD3	100	98.425	ENSHBUG00000001332	snrpd3l	100	98.425	Haplochromis_burtoni
ENSLACG00000015192	SNRPD3	100	99.206	ENSHGLG00000016496	SNRPD3	100	99.206	Heterocephalus_glaber_female
ENSLACG00000015192	SNRPD3	99	96.000	ENSHGLG00000009844	-	99	96.000	Heterocephalus_glaber_female
ENSLACG00000015192	SNRPD3	99	96.000	ENSHGLG00100011326	-	99	96.000	Heterocephalus_glaber_male
ENSLACG00000015192	SNRPD3	100	99.206	ENSHGLG00100019304	SNRPD3	100	99.206	Heterocephalus_glaber_male
ENSLACG00000015192	SNRPD3	100	97.638	ENSHCOG00000014396	snrpd3l	100	97.638	Hippocampus_comes
ENSLACG00000015192	SNRPD3	100	95.312	ENSIPUG00000003083	snrpd3	100	95.312	Ictalurus_punctatus
ENSLACG00000015192	SNRPD3	100	99.206	ENSSTOG00000025674	SNRPD3	100	99.206	Ictidomys_tridecemlineatus
ENSLACG00000015192	SNRPD3	100	99.206	ENSJJAG00000013303	Snrpd3	100	99.206	Jaculus_jaculus
ENSLACG00000015192	SNRPD3	100	97.638	ENSKMAG00000012493	snrpd3l	100	97.638	Kryptolebias_marmoratus
ENSLACG00000015192	SNRPD3	100	98.425	ENSLBEG00000003202	snrpd3l	100	98.425	Labrus_bergylta
ENSLACG00000015192	SNRPD3	100	98.425	ENSLOCG00000006978	snrpd3	100	98.425	Lepisosteus_oculatus
ENSLACG00000015192	SNRPD3	100	99.206	ENSLAFG00000028180	SNRPD3	100	99.206	Loxodonta_africana
ENSLACG00000015192	SNRPD3	100	99.206	ENSMFAG00000033628	SNRPD3	100	99.206	Macaca_fascicularis
ENSLACG00000015192	SNRPD3	100	99.206	ENSMMUG00000000264	SNRPD3	100	99.206	Macaca_mulatta
ENSLACG00000015192	SNRPD3	100	99.206	ENSMNEG00000020857	SNRPD3	100	99.206	Macaca_nemestrina
ENSLACG00000015192	SNRPD3	100	99.206	ENSMLEG00000037548	SNRPD3	100	99.206	Mandrillus_leucophaeus
ENSLACG00000015192	SNRPD3	100	98.425	ENSMZEG00005017664	snrpd3l	100	98.425	Maylandia_zebra
ENSLACG00000015192	SNRPD3	100	99.206	ENSMAUG00000021393	Snrpd3	100	99.206	Mesocricetus_auratus
ENSLACG00000015192	SNRPD3	100	99.206	ENSMICG00000034782	SNRPD3	100	99.206	Microcebus_murinus
ENSLACG00000015192	SNRPD3	100	99.206	ENSMOCG00000009361	Snrpd3	100	99.206	Microtus_ochrogaster
ENSLACG00000015192	SNRPD3	97	89.344	ENSMMOG00000020985	snrpd3l	67	99.057	Mola_mola
ENSLACG00000015192	SNRPD3	100	99.206	ENSMODG00000004024	SNRPD3	100	99.206	Monodelphis_domestica
ENSLACG00000015192	SNRPD3	100	98.425	ENSMALG00000013334	snrpd3l	100	98.425	Monopterus_albus
ENSLACG00000015192	SNRPD3	100	99.206	MGP_CAROLIEiJ_G0015441	Snrpd3	100	99.206	Mus_caroli
ENSLACG00000015192	SNRPD3	100	99.206	ENSMUSG00000020180	Snrpd3	100	99.206	Mus_musculus
ENSLACG00000015192	SNRPD3	100	99.206	MGP_PahariEiJ_G0030857	Snrpd3	100	99.206	Mus_pahari
ENSLACG00000015192	SNRPD3	100	99.206	MGP_SPRETEiJ_G0016254	Snrpd3	100	99.206	Mus_spretus
ENSLACG00000015192	SNRPD3	100	99.206	ENSMPUG00000002889	SNRPD3	100	99.206	Mustela_putorius_furo
ENSLACG00000015192	SNRPD3	100	99.206	ENSMLUG00000009838	SNRPD3	100	99.206	Myotis_lucifugus
ENSLACG00000015192	SNRPD3	100	99.206	ENSNGAG00000010328	Snrpd3	100	99.206	Nannospalax_galili
ENSLACG00000015192	SNRPD3	100	98.425	ENSNBRG00000020307	snrpd3l	100	98.425	Neolamprologus_brichardi
ENSLACG00000015192	SNRPD3	100	99.206	ENSNLEG00000035757	SNRPD3	100	99.206	Nomascus_leucogenys
ENSLACG00000015192	SNRPD3	100	99.206	ENSMEUG00000003772	SNRPD3	100	99.206	Notamacropus_eugenii
ENSLACG00000015192	SNRPD3	100	99.206	ENSOPRG00000005763	SNRPD3	100	99.206	Ochotona_princeps
ENSLACG00000015192	SNRPD3	100	96.032	ENSODEG00000020162	-	100	96.032	Octodon_degus
ENSLACG00000015192	SNRPD3	100	99.206	ENSODEG00000008064	-	100	99.206	Octodon_degus
ENSLACG00000015192	SNRPD3	100	98.413	ENSODEG00000019354	-	100	98.413	Octodon_degus
ENSLACG00000015192	SNRPD3	100	98.425	ENSONIG00000003828	snrpd3l	100	98.425	Oreochromis_niloticus
ENSLACG00000015192	SNRPD3	100	99.206	ENSOANG00000002463	SNRPD3	100	99.206	Ornithorhynchus_anatinus
ENSLACG00000015192	SNRPD3	100	99.206	ENSOCUG00000004845	SNRPD3	100	99.206	Oryctolagus_cuniculus
ENSLACG00000015192	SNRPD3	100	98.425	ENSORLG00000010586	snrpd3l	100	98.425	Oryzias_latipes
ENSLACG00000015192	SNRPD3	100	98.425	ENSORLG00020011769	snrpd3l	100	98.425	Oryzias_latipes_hni
ENSLACG00000015192	SNRPD3	100	98.425	ENSORLG00015022940	snrpd3l	100	98.425	Oryzias_latipes_hsok
ENSLACG00000015192	SNRPD3	100	97.638	ENSOMEG00000022734	snrpd3l	100	97.638	Oryzias_melastigma
ENSLACG00000015192	SNRPD3	100	99.206	ENSOGAG00000012708	SNRPD3	100	99.206	Otolemur_garnettii
ENSLACG00000015192	SNRPD3	100	99.206	ENSOARG00000013984	SNRPD3	100	99.206	Ovis_aries
ENSLACG00000015192	SNRPD3	100	99.206	ENSPPAG00000039191	SNRPD3	100	99.206	Pan_paniscus
ENSLACG00000015192	SNRPD3	100	99.206	ENSPPRG00000001470	SNRPD3	100	99.206	Panthera_pardus
ENSLACG00000015192	SNRPD3	100	99.206	ENSPTIG00000016610	SNRPD3	100	99.206	Panthera_tigris_altaica
ENSLACG00000015192	SNRPD3	100	99.206	ENSPTRG00000014176	SNRPD3	100	99.206	Pan_troglodytes
ENSLACG00000015192	SNRPD3	100	99.206	ENSPANG00000009279	SNRPD3	100	99.206	Papio_anubis
ENSLACG00000015192	SNRPD3	100	96.063	ENSPKIG00000006412	snrpd3l	100	96.063	Paramormyrops_kingsleyae
ENSLACG00000015192	SNRPD3	100	97.619	ENSPSIG00000010022	-	100	97.619	Pelodiscus_sinensis
ENSLACG00000015192	SNRPD3	98	91.057	ENSPMGG00000004486	snrpd3l	100	91.057	Periophthalmus_magnuspinnatus
ENSLACG00000015192	SNRPD3	100	99.206	ENSPCIG00000010910	SNRPD3	84	99.206	Phascolarctos_cinereus
ENSLACG00000015192	SNRPD3	100	97.638	ENSPFOG00000019673	snrpd3l	100	97.638	Poecilia_formosa
ENSLACG00000015192	SNRPD3	100	97.638	ENSPLAG00000023249	snrpd3l	100	97.638	Poecilia_latipinna
ENSLACG00000015192	SNRPD3	100	97.638	ENSPMEG00000008482	snrpd3l	100	97.638	Poecilia_mexicana
ENSLACG00000015192	SNRPD3	84	99.057	ENSPREG00000007532	snrpd3l	87	99.057	Poecilia_reticulata
ENSLACG00000015192	SNRPD3	100	99.206	ENSPPYG00000011648	SNRPD3	100	99.206	Pongo_abelii
ENSLACG00000015192	SNRPD3	100	99.206	ENSPCAG00000002065	SNRPD3	100	99.206	Procavia_capensis
ENSLACG00000015192	SNRPD3	100	99.206	ENSPCOG00000011842	SNRPD3	100	99.206	Propithecus_coquereli
ENSLACG00000015192	SNRPD3	100	98.413	ENSPVAG00000011405	SNRPD3	100	98.413	Pteropus_vampyrus
ENSLACG00000015192	SNRPD3	100	98.425	ENSPNYG00000013344	snrpd3l	100	98.425	Pundamilia_nyererei
ENSLACG00000015192	SNRPD3	100	90.551	ENSPNAG00000010547	snrpd3	100	94.488	Pygocentrus_nattereri
ENSLACG00000015192	SNRPD3	100	90.625	ENSPNAG00000008683	snrpd3l	100	93.750	Pygocentrus_nattereri
ENSLACG00000015192	SNRPD3	100	99.206	ENSRNOG00000050410	Snrpd3	100	99.206	Rattus_norvegicus
ENSLACG00000015192	SNRPD3	100	99.206	ENSRBIG00000029017	SNRPD3	100	99.206	Rhinopithecus_bieti
ENSLACG00000015192	SNRPD3	100	99.206	ENSRROG00000031152	SNRPD3	100	99.206	Rhinopithecus_roxellana
ENSLACG00000015192	SNRPD3	75	46.316	YLR147C	SMD3	92	46.316	Saccharomyces_cerevisiae
ENSLACG00000015192	SNRPD3	100	96.850	ENSSFOG00015014180	snrpd3l	100	96.850	Scleropages_formosus
ENSLACG00000015192	SNRPD3	100	96.063	ENSSFOG00015007002	snrpd3l	100	96.063	Scleropages_formosus
ENSLACG00000015192	SNRPD3	100	98.425	ENSSMAG00000019307	snrpd3l	100	98.425	Scophthalmus_maximus
ENSLACG00000015192	SNRPD3	100	98.425	ENSSDUG00000006870	snrpd3l	100	98.425	Seriola_dumerili
ENSLACG00000015192	SNRPD3	100	98.425	ENSSLDG00000022664	snrpd3l	100	98.425	Seriola_lalandi_dorsalis
ENSLACG00000015192	SNRPD3	100	99.206	ENSSARG00000002357	SNRPD3	100	99.206	Sorex_araneus
ENSLACG00000015192	SNRPD3	100	98.413	ENSSPUG00000014285	SNRPD3	100	98.413	Sphenodon_punctatus
ENSLACG00000015192	SNRPD3	100	99.206	ENSSSCG00000010058	SNRPD3	100	99.206	Sus_scrofa
ENSLACG00000015192	SNRPD3	100	99.206	ENSTGUG00000010079	SNRPD3	100	99.206	Taeniopygia_guttata
ENSLACG00000015192	SNRPD3	84	99.057	ENSTRUG00000023976	snrpd3l	90	99.057	Takifugu_rubripes
ENSLACG00000015192	SNRPD3	100	97.638	ENSTNIG00000005323	snrpd3l	100	97.638	Tetraodon_nigroviridis
ENSLACG00000015192	SNRPD3	100	99.206	ENSTBEG00000014334	SNRPD3	100	99.206	Tupaia_belangeri
ENSLACG00000015192	SNRPD3	100	99.206	ENSTTRG00000006022	SNRPD3	100	99.206	Tursiops_truncatus
ENSLACG00000015192	SNRPD3	100	99.206	ENSUAMG00000010767	SNRPD3	100	99.206	Ursus_americanus
ENSLACG00000015192	SNRPD3	100	99.206	ENSUMAG00000001670	SNRPD3	100	99.206	Ursus_maritimus
ENSLACG00000015192	SNRPD3	100	99.206	ENSVPAG00000000241	SNRPD3	100	99.206	Vicugna_pacos
ENSLACG00000015192	SNRPD3	84	99.057	ENSVVUG00000019340	SNRPD3	53	99.057	Vulpes_vulpes
ENSLACG00000015192	SNRPD3	100	82.812	ENSXETG00000024918	snrpd3	100	82.812	Xenopus_tropicalis
ENSLACG00000015192	SNRPD3	100	97.638	ENSXCOG00000004795	snrpd3l	100	97.638	Xiphophorus_couchianus
ENSLACG00000015192	SNRPD3	100	97.638	ENSXMAG00000001133	snrpd3l	100	97.638	Xiphophorus_maculatus