EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000015201 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 2068 bases
Position: chrJH127005.1:1199350-1201417
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000017258	RVT_1	PF00078.27	2.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000017385	-	1674	-	ENSLACP00000017258	557 (aa)	-	H3B5T7

Gene Model

Click here to download ENSLACG00000015201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015201's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000015201	-	58	36.735	ENSLACG00000012109	-	60	36.735
ENSLACG00000015201	-	65	36.176	ENSLACG00000005365	-	89	36.176
ENSLACG00000015201	-	63	35.092	ENSLACG00000008450	-	50	35.092
ENSLACG00000015201	-	63	30.513	ENSLACG00000018782	-	52	30.513
ENSLACG00000015201	-	60	31.129	ENSLACG00000006413	-	52	31.129
ENSLACG00000015201	-	61	35.912	ENSLACG00000009347	-	59	35.912
ENSLACG00000015201	-	68	35.750	ENSLACG00000006151	-	50	35.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000015201	-	57	31.065	ENSAPOG00000008925	-	94	31.065	Acanthochromis_polyacanthus
ENSLACG00000015201	-	64	36.243	ENSAOCG00000003030	-	51	36.053	Amphiprion_ocellaris
ENSLACG00000015201	-	67	36.165	ENSAPEG00000006765	-	64	36.165	Amphiprion_percula
ENSLACG00000015201	-	70	34.318	ENSACLG00000012278	-	55	34.318	Astatotilapia_calliptera
ENSLACG00000015201	-	71	33.333	ENSACLG00000005847	-	60	33.333	Astatotilapia_calliptera
ENSLACG00000015201	-	75	30.998	ENSACLG00000005526	-	56	30.998	Astatotilapia_calliptera
ENSLACG00000015201	-	72	38.756	ENSACLG00000020385	-	72	38.756	Astatotilapia_calliptera
ENSLACG00000015201	-	54	30.218	ENSACLG00000007712	-	56	30.218	Astatotilapia_calliptera
ENSLACG00000015201	-	100	32.951	ENSACLG00000027627	-	50	33.115	Astatotilapia_calliptera
ENSLACG00000015201	-	100	32.353	ENSACLG00000014740	-	71	32.843	Astatotilapia_calliptera
ENSLACG00000015201	-	61	30.769	ENSAMXG00000038502	-	74	30.769	Astyanax_mexicanus
ENSLACG00000015201	-	68	35.885	ENSAMXG00000043631	-	51	35.885	Astyanax_mexicanus
ENSLACG00000015201	-	72	35.867	ENSAMXG00000040471	-	64	35.867	Astyanax_mexicanus
ENSLACG00000015201	-	79	31.846	ENSAMXG00000042777	-	64	31.846	Astyanax_mexicanus
ENSLACG00000015201	-	59	36.685	ENSAMXG00000038480	-	52	36.685	Astyanax_mexicanus
ENSLACG00000015201	-	85	34.423	ENSAMXG00000039114	-	51	34.423	Astyanax_mexicanus
ENSLACG00000015201	-	68	35.885	ENSAMXG00000030761	-	55	35.885	Astyanax_mexicanus
ENSLACG00000015201	-	70	32.574	ENSAMXG00000041465	-	59	32.574	Astyanax_mexicanus
ENSLACG00000015201	-	50	31.633	ENSAMXG00000043469	-	63	31.633	Astyanax_mexicanus
ENSLACG00000015201	-	78	33.623	ENSCPBG00000001369	-	81	33.623	Chrysemys_picta_bellii
ENSLACG00000015201	-	61	34.262	ENSCPBG00000001119	-	78	34.262	Chrysemys_picta_bellii
ENSLACG00000015201	-	72	34.917	ENSGAGG00000002613	-	57	34.917	Gopherus_agassizii
ENSLACG00000015201	-	68	34.889	ENSGAGG00000007552	-	63	34.889	Gopherus_agassizii
ENSLACG00000015201	-	68	31.592	ENSGAGG00000007173	-	62	31.592	Gopherus_agassizii
ENSLACG00000015201	-	71	36.058	ENSGAGG00000013650	-	74	36.058	Gopherus_agassizii
ENSLACG00000015201	-	57	31.845	ENSLBEG00000003912	-	86	31.845	Labrus_bergylta
ENSLACG00000015201	-	67	35.835	ENSMAMG00000016004	-	62	35.835	Mastacembelus_armatus
ENSLACG00000015201	-	66	32.658	ENSMAMG00000019918	-	64	32.658	Mastacembelus_armatus
ENSLACG00000015201	-	73	39.716	ENSMZEG00005008378	-	61	38.889	Maylandia_zebra
ENSLACG00000015201	-	87	36.138	ENSMZEG00005024252	-	61	36.138	Maylandia_zebra
ENSLACG00000015201	-	75	30.998	ENSMZEG00005004899	-	57	30.998	Maylandia_zebra
ENSLACG00000015201	-	67	35.904	ENSMZEG00005017878	-	64	35.904	Maylandia_zebra
ENSLACG00000015201	-	50	31.633	ENSNBRG00000002791	-	95	31.633	Neolamprologus_brichardi
ENSLACG00000015201	-	100	33.070	ENSORLG00000023550	-	50	33.228	Oryzias_latipes
ENSLACG00000015201	-	55	37.730	ENSORLG00020021288	-	100	37.730	Oryzias_latipes_hni
ENSLACG00000015201	-	70	41.439	ENSORLG00020001433	-	55	41.439	Oryzias_latipes_hni
ENSLACG00000015201	-	61	30.874	ENSORLG00020002002	-	57	30.874	Oryzias_latipes_hni
ENSLACG00000015201	-	58	30.460	ENSORLG00020000154	-	85	30.460	Oryzias_latipes_hni
ENSLACG00000015201	-	56	31.250	ENSORLG00020016252	-	89	31.250	Oryzias_latipes_hni
ENSLACG00000015201	-	60	33.427	ENSORLG00020016924	-	84	33.427	Oryzias_latipes_hni
ENSLACG00000015201	-	61	30.328	ENSORLG00020009127	-	71	30.328	Oryzias_latipes_hni
ENSLACG00000015201	-	58	30.904	ENSORLG00020012706	-	86	30.904	Oryzias_latipes_hni
ENSLACG00000015201	-	68	31.514	ENSORLG00015008138	-	76	31.514	Oryzias_latipes_hsok
ENSLACG00000015201	-	100	32.803	ENSORLG00015000130	-	55	32.803	Oryzias_latipes_hsok
ENSLACG00000015201	-	65	39.267	ENSORLG00015013109	-	61	39.267	Oryzias_latipes_hsok
ENSLACG00000015201	-	57	30.178	ENSORLG00015021822	-	90	30.702	Oryzias_latipes_hsok
ENSLACG00000015201	-	64	30.026	ENSOMEG00000013437	-	66	30.026	Oryzias_melastigma
ENSLACG00000015201	-	65	41.361	ENSOMEG00000013479	-	62	41.361	Oryzias_melastigma
ENSLACG00000015201	-	66	32.570	ENSPKIG00000015048	-	57	32.570	Paramormyrops_kingsleyae
ENSLACG00000015201	-	57	37.330	ENSPKIG00000012990	-	54	37.330	Paramormyrops_kingsleyae
ENSLACG00000015201	-	56	32.934	ENSPSIG00000000007	-	79	32.934	Pelodiscus_sinensis
ENSLACG00000015201	-	66	34.359	ENSPSIG00000001197	-	96	34.359	Pelodiscus_sinensis
ENSLACG00000015201	-	66	34.872	ENSPSIG00000001205	-	84	34.872	Pelodiscus_sinensis
ENSLACG00000015201	-	68	38.480	ENSPSIG00000000226	-	77	38.480	Pelodiscus_sinensis
ENSLACG00000015201	-	72	35.392	ENSPSIG00000001614	-	60	35.392	Pelodiscus_sinensis
ENSLACG00000015201	-	63	33.155	ENSPSIG00000001800	-	84	33.155	Pelodiscus_sinensis
ENSLACG00000015201	-	72	34.286	ENSPSIG00000001150	-	56	34.286	Pelodiscus_sinensis
ENSLACG00000015201	-	57	34.226	ENSPSIG00000001249	-	96	34.226	Pelodiscus_sinensis
ENSLACG00000015201	-	61	34.341	ENSPSIG00000000367	-	83	34.341	Pelodiscus_sinensis
ENSLACG00000015201	-	64	37.037	ENSPSIG00000000193	-	75	37.037	Pelodiscus_sinensis
ENSLACG00000015201	-	53	36.190	ENSPSIG00000014032	-	92	36.190	Pelodiscus_sinensis
ENSLACG00000015201	-	66	35.385	ENSPSIG00000001757	-	95	35.385	Pelodiscus_sinensis
ENSLACG00000015201	-	53	32.381	ENSPMEG00000017235	-	54	32.335	Poecilia_mexicana
ENSLACG00000015201	-	65	41.995	ENSPREG00000006122	-	50	41.995	Poecilia_reticulata
ENSLACG00000015201	-	59	34.903	ENSPREG00000006496	-	50	34.903	Poecilia_reticulata
ENSLACG00000015201	-	61	30.137	ENSPNAG00000009058	-	72	30.137	Pygocentrus_nattereri
ENSLACG00000015201	-	61	30.854	ENSPNAG00000015949	-	94	30.854	Pygocentrus_nattereri
ENSLACG00000015201	-	81	35.174	ENSPNAG00000009767	-	50	35.174	Pygocentrus_nattereri
ENSLACG00000015201	-	72	32.456	ENSSFOG00015024061	-	74	32.456	Scleropages_formosus
ENSLACG00000015201	-	62	31.720	ENSTRUG00000024803	-	71	31.720	Takifugu_rubripes
ENSLACG00000015201	-	100	34.390	ENSXMAG00000021174	-	50	34.390	Xiphophorus_maculatus
ENSLACG00000015201	-	54	34.969	ENSXMAG00000023507	-	63	34.969	Xiphophorus_maculatus
ENSLACG00000015201	-	51	30.303	ENSXMAG00000025957	-	52	30.303	Xiphophorus_maculatus
ENSLACG00000015201	-	82	31.361	ENSXMAG00000024180	-	50	31.361	Xiphophorus_maculatus