EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000015214 (Gene tree)
Gene ID: 102367138
Gene Symbol: ddx61
Alias: fk48d07|p54b|si:ch211-175g6.7|wu:fk48d07
Full Name: probable ATP-dependent RNA helicase ddx6
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 12753 bases
Position: chrJH127065.1:1202913-1215665
Accession: 102367138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000017273	DEAD	PF00270.29	4.7e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000017400	-	1440	XM_005999129	ENSLACP00000017273	480 (aa)	XP_005999191	H3B5V2

Gene Model

Click here to download ENSLACG00000015214's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015214's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000015214	ddx61	68	35.015	ENSLACG00000006598	-	51	34.808
ENSLACG00000015214	ddx61	78	38.095	ENSLACG00000000108	EIF4A3	92	38.095
ENSLACG00000015214	ddx61	67	31.611	ENSLACG00000015308	DDX18	57	31.611
ENSLACG00000015214	ddx61	71	31.180	ENSLACG00000012899	DDX41	58	31.653
ENSLACG00000015214	ddx61	76	35.040	ENSLACG00000013814	DDX47	81	35.040
ENSLACG00000015214	ddx61	79	30.073	ENSLACG00000007753	ddx3xa	61	30.073
ENSLACG00000015214	ddx61	72	32.320	ENSLACG00000008244	DDX49	74	32.320
ENSLACG00000015214	ddx61	76	30.380	ENSLACG00000017651	DDX25	78	31.008
ENSLACG00000015214	ddx61	68	32.132	ENSLACG00000000741	ddx43	68	32.132
ENSLACG00000015214	ddx61	70	40.678	ENSLACG00000010529	DDX1	53	40.678
ENSLACG00000015214	ddx61	77	40.591	ENSLACG00000017818	eif4a2	91	40.591
ENSLACG00000015214	ddx61	78	36.053	ENSLACG00000015063	DDX39A	89	36.053
ENSLACG00000015214	ddx61	71	36.695	ENSLACG00000018608	ddx19	88	36.695
ENSLACG00000015214	ddx61	77	39.084	ENSLACG00000003242	eif4a1a	91	39.084
ENSLACG00000015214	ddx61	78	32.727	ENSLACG00000002110	DDX39B	89	32.727
ENSLACG00000015214	ddx61	77	31.643	ENSLACG00000016977	DDX23	55	31.643
ENSLACG00000015214	ddx61	77	39.946	ENSLACG00000004638	-	90	39.946
ENSLACG00000015214	ddx61	100	80.412	ENSLACG00000017153	DDX6	100	80.619
ENSLACG00000015214	ddx61	76	31.105	ENSLACG00000017050	DDX55	65	31.105
ENSLACG00000015214	ddx61	69	31.858	ENSLACG00000015051	DDX5	66	31.858

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000015214	ddx61	75	90.055	ENSAPOG00000023627	-	92	90.055	Acanthochromis_polyacanthus
ENSLACG00000015214	ddx61	99	82.744	ENSAPOG00000014829	ddx61	97	82.744	Acanthochromis_polyacanthus
ENSLACG00000015214	ddx61	100	77.593	ENSACIG00000018355	-	98	77.593	Amphilophus_citrinellus
ENSLACG00000015214	ddx61	99	83.054	ENSAOCG00000007627	ddx61	97	83.054	Amphiprion_ocellaris
ENSLACG00000015214	ddx61	100	83.195	ENSAOCG00000006269	-	97	84.232	Amphiprion_ocellaris
ENSLACG00000015214	ddx61	100	83.195	ENSAPEG00000020642	-	97	84.232	Amphiprion_percula
ENSLACG00000015214	ddx61	99	83.054	ENSAPEG00000007293	ddx61	97	83.054	Amphiprion_percula
ENSLACG00000015214	ddx61	100	83.195	ENSAPEG00000021368	-	97	84.232	Amphiprion_percula
ENSLACG00000015214	ddx61	100	84.679	ENSATEG00000005424	-	97	84.679	Anabas_testudineus
ENSLACG00000015214	ddx61	99	81.799	ENSATEG00000011302	ddx61	99	81.628	Anabas_testudineus
ENSLACG00000015214	ddx61	100	82.365	ENSACLG00000027620	ddx61	99	82.365	Astatotilapia_calliptera
ENSLACG00000015214	ddx61	100	84.232	ENSACLG00000003260	-	98	84.232	Astatotilapia_calliptera
ENSLACG00000015214	ddx61	99	82.121	ENSAMXG00000032542	ddx61	98	82.062	Astyanax_mexicanus
ENSLACG00000015214	ddx61	100	83.539	ENSAMXG00000033980	-	97	83.539	Astyanax_mexicanus
ENSLACG00000015214	ddx61	100	84.025	ENSCSEG00000009893	-	97	84.025	Cynoglossus_semilaevis
ENSLACG00000015214	ddx61	100	84.232	ENSCVAG00000011006	-	97	84.232	Cyprinodon_variegatus
ENSLACG00000015214	ddx61	99	83.402	ENSDARG00000018425	ddx61	98	83.402	Danio_rerio
ENSLACG00000015214	ddx61	99	83.542	ENSELUG00000022538	-	97	83.542	Esox_lucius
ENSLACG00000015214	ddx61	100	83.471	ENSELUG00000020545	ddx61	98	83.471	Esox_lucius
ENSLACG00000015214	ddx61	100	84.855	ENSFHEG00000015487	-	97	84.855	Fundulus_heteroclitus
ENSLACG00000015214	ddx61	68	78.078	ENSGMOG00000003561	-	100	78.679	Gadus_morhua
ENSLACG00000015214	ddx61	99	83.891	ENSGMOG00000013762	ddx61	99	83.023	Gadus_morhua
ENSLACG00000015214	ddx61	98	85.443	ENSGAFG00000015865	-	95	85.443	Gambusia_affinis
ENSLACG00000015214	ddx61	100	81.988	ENSGACG00000002413	-	99	82.851	Gasterosteus_aculeatus
ENSLACG00000015214	ddx61	100	81.856	ENSGACG00000003401	ddx61	99	81.856	Gasterosteus_aculeatus
ENSLACG00000015214	ddx61	100	82.365	ENSHBUG00000017832	ddx61	99	82.365	Haplochromis_burtoni
ENSLACG00000015214	ddx61	100	84.232	ENSHBUG00000017033	-	98	84.232	Haplochromis_burtoni
ENSLACG00000015214	ddx61	100	82.780	ENSHCOG00000012238	-	97	82.780	Hippocampus_comes
ENSLACG00000015214	ddx61	99	79.461	ENSHCOG00000008184	ddx61	98	79.461	Hippocampus_comes
ENSLACG00000015214	ddx61	98	82.241	ENSIPUG00000012823	DDX6	98	81.705	Ictalurus_punctatus
ENSLACG00000015214	ddx61	99	81.612	ENSIPUG00000008367	-	99	81.649	Ictalurus_punctatus
ENSLACG00000015214	ddx61	98	85.232	ENSKMAG00000007213	-	96	85.232	Kryptolebias_marmoratus
ENSLACG00000015214	ddx61	99	82.292	ENSLBEG00000001740	ddx61	98	82.292	Labrus_bergylta
ENSLACG00000015214	ddx61	100	82.680	ENSLBEG00000016890	-	97	82.680	Labrus_bergylta
ENSLACG00000015214	ddx61	99	50.104	ENSLOCG00000004352	ddx61	95	50.731	Lepisosteus_oculatus
ENSLACG00000015214	ddx61	99	83.333	ENSMAMG00000005321	ddx61	97	83.333	Mastacembelus_armatus
ENSLACG00000015214	ddx61	100	83.505	ENSMAMG00000005559	-	97	83.505	Mastacembelus_armatus
ENSLACG00000015214	ddx61	100	84.232	ENSMZEG00005026268	-	98	84.232	Maylandia_zebra
ENSLACG00000015214	ddx61	100	82.365	ENSMZEG00005003556	ddx61	99	82.365	Maylandia_zebra
ENSLACG00000015214	ddx61	99	82.427	ENSMMOG00000007415	ddx61	97	82.427	Mola_mola
ENSLACG00000015214	ddx61	74	73.654	ENSMMOG00000008825	-	92	73.654	Mola_mola
ENSLACG00000015214	ddx61	100	75.104	ENSMMOG00000013694	-	97	75.104	Mola_mola
ENSLACG00000015214	ddx61	100	83.437	ENSMALG00000013817	-	98	83.437	Monopterus_albus
ENSLACG00000015214	ddx61	99	70.902	ENSMALG00000013776	ddx61	96	70.902	Monopterus_albus
ENSLACG00000015214	ddx61	100	77.593	ENSNBRG00000015075	-	98	77.593	Neolamprologus_brichardi
ENSLACG00000015214	ddx61	99	75.569	ENSNBRG00000015800	ddx61	99	75.569	Neolamprologus_brichardi
ENSLACG00000015214	ddx61	100	84.440	ENSONIG00000013748	-	98	84.440	Oreochromis_niloticus
ENSLACG00000015214	ddx61	100	82.438	ENSONIG00000011418	ddx61	99	82.438	Oreochromis_niloticus
ENSLACG00000015214	ddx61	100	83.984	ENSORLG00000009178	-	98	83.984	Oryzias_latipes
ENSLACG00000015214	ddx61	100	84.711	ENSORLG00020015515	-	98	84.711	Oryzias_latipes_hni
ENSLACG00000015214	ddx61	100	84.711	ENSORLG00015006764	-	98	84.711	Oryzias_latipes_hsok
ENSLACG00000015214	ddx61	99	76.200	ENSOMEG00000022326	-	98	76.200	Oryzias_melastigma
ENSLACG00000015214	ddx61	99	84.886	ENSPKIG00000024264	ddx61	98	84.836	Paramormyrops_kingsleyae
ENSLACG00000015214	ddx61	100	75.309	ENSPMGG00000013355	-	99	75.309	Periophthalmus_magnuspinnatus
ENSLACG00000015214	ddx61	98	85.865	ENSPFOG00000005750	-	96	85.865	Poecilia_formosa
ENSLACG00000015214	ddx61	98	85.865	ENSPLAG00000000403	-	96	85.865	Poecilia_latipinna
ENSLACG00000015214	ddx61	100	85.062	ENSPMEG00000023737	-	98	85.062	Poecilia_mexicana
ENSLACG00000015214	ddx61	100	76.493	ENSPNYG00000015045	ddx61	99	76.493	Pundamilia_nyererei
ENSLACG00000015214	ddx61	100	84.232	ENSPNYG00000003986	-	98	84.232	Pundamilia_nyererei
ENSLACG00000015214	ddx61	100	83.918	ENSPNAG00000008742	-	98	83.918	Pygocentrus_nattereri
ENSLACG00000015214	ddx61	100	81.289	ENSPNAG00000024072	ddx61	99	81.289	Pygocentrus_nattereri
ENSLACG00000015214	ddx61	98	85.084	ENSSFOG00015021404	ddx61	97	84.504	Scleropages_formosus
ENSLACG00000015214	ddx61	100	83.195	ENSSMAG00000001793	-	97	83.195	Scophthalmus_maximus
ENSLACG00000015214	ddx61	98	81.646	ENSSMAG00000006591	ddx61	97	80.665	Scophthalmus_maximus
ENSLACG00000015214	ddx61	98	83.333	ENSSDUG00000009713	ddx61	98	82.158	Seriola_dumerili
ENSLACG00000015214	ddx61	100	84.058	ENSSDUG00000007530	-	97	84.058	Seriola_dumerili
ENSLACG00000015214	ddx61	98	83.333	ENSSLDG00000000132	ddx61	98	82.158	Seriola_lalandi_dorsalis
ENSLACG00000015214	ddx61	100	84.058	ENSSLDG00000007608	-	97	84.058	Seriola_lalandi_dorsalis
ENSLACG00000015214	ddx61	98	83.438	ENSSPAG00000001578	ddx61	97	82.609	Stegastes_partitus
ENSLACG00000015214	ddx61	100	85.062	ENSSPAG00000013878	-	97	85.062	Stegastes_partitus
ENSLACG00000015214	ddx61	100	80.698	ENSTRUG00000012432	-	97	81.520	Takifugu_rubripes
ENSLACG00000015214	ddx61	99	82.099	ENSTNIG00000003560	-	99	82.099	Tetraodon_nigroviridis
ENSLACG00000015214	ddx61	98	77.004	ENSXCOG00000001406	-	95	77.004	Xiphophorus_couchianus
ENSLACG00000015214	ddx61	98	85.865	ENSXMAG00000016090	-	95	85.865	Xiphophorus_maculatus