EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000015247 (Gene tree)
Gene ID: 102347416
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 174501 bases
Position: chrJH126655.1:1208982-1383482
Accession: 102347416
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000017311	La	PF05383.17	1.9e-23	1	1
ENSLACP00000017310	La	PF05383.17	1.7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000017438	LARP1B-202	1170	-	ENSLACP00000017311	390 (aa)	-	H3B5Z0
ENSLACT00000017437	LARP1B-201	4949	XM_005991287	ENSLACP00000017310	1078 (aa)	XP_005991349	H3B5Y9

Gene Model

Click here to download ENSLACG00000015247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000015247	LARP1B	100	68.448	ENSG00000138709	LARP1B	99	71.319	Homo_sapiens
ENSLACG00000015247	LARP1B	88	59.697	ENSAPOG00000020101	larp1b	91	58.607	Acanthochromis_polyacanthus
ENSLACG00000015247	LARP1B	100	70.738	ENSAMEG00000002748	LARP1B	99	72.333	Ailuropoda_melanoleuca
ENSLACG00000015247	LARP1B	88	57.949	ENSACIG00000023890	larp1b	91	55.842	Amphilophus_citrinellus
ENSLACG00000015247	LARP1B	99	45.137	ENSAOCG00000014268	larp1b	91	57.015	Amphiprion_ocellaris
ENSLACG00000015247	LARP1B	90	60.159	ENSAPEG00000004126	larp1b	92	59.540	Amphiprion_percula
ENSLACG00000015247	LARP1B	95	56.350	ENSATEG00000017849	larp1b	97	56.256	Anabas_testudineus
ENSLACG00000015247	LARP1B	99	61.125	ENSAPLG00000010129	LARP1B	100	67.900	Anas_platyrhynchos
ENSLACG00000015247	LARP1B	99	70.663	ENSACAG00000011338	LARP1B	94	72.459	Anolis_carolinensis
ENSLACG00000015247	LARP1B	82	72.981	ENSANAG00000034618	LARP1B	91	69.065	Aotus_nancymaae
ENSLACG00000015247	LARP1B	90	58.611	ENSACLG00000011948	larp1b	95	57.129	Astatotilapia_calliptera
ENSLACG00000015247	LARP1B	99	43.765	ENSAMXG00000006805	larp1b	91	53.366	Astyanax_mexicanus
ENSLACG00000015247	LARP1B	100	68.274	ENSBTAG00000012135	LARP1B	98	69.186	Bos_taurus
ENSLACG00000015247	LARP1B	100	69.975	ENSCJAG00000003338	LARP1B	99	73.127	Callithrix_jacchus
ENSLACG00000015247	LARP1B	100	70.738	ENSCAFG00000003831	LARP1B	99	72.618	Canis_familiaris
ENSLACG00000015247	LARP1B	100	70.738	ENSCAFG00020018899	LARP1B	98	73.252	Canis_lupus_dingo
ENSLACG00000015247	LARP1B	100	67.766	ENSCHIG00000023144	LARP1B	98	70.737	Capra_hircus
ENSLACG00000015247	LARP1B	85	65.663	ENSTSYG00000002037	-	93	67.372	Carlito_syrichta
ENSLACG00000015247	LARP1B	64	73.832	ENSCPOG00000034668	-	76	78.302	Cavia_porcellus
ENSLACG00000015247	LARP1B	100	69.720	ENSCCAG00000021948	LARP1B	99	71.868	Cebus_capucinus
ENSLACG00000015247	LARP1B	100	67.430	ENSCATG00000013541	LARP1B	99	70.957	Cercocebus_atys
ENSLACG00000015247	LARP1B	84	66.869	ENSCLAG00000006448	-	97	68.598	Chinchilla_lanigera
ENSLACG00000015247	LARP1B	100	69.114	ENSCSAG00000003582	LARP1B	99	71.711	Chlorocebus_sabaeus
ENSLACG00000015247	LARP1B	99	61.893	ENSCHOG00000005354	LARP1B	99	66.520	Choloepus_hoffmanni
ENSLACG00000015247	LARP1B	99	74.103	ENSCPBG00000017480	LARP1B	92	72.680	Chrysemys_picta_bellii
ENSLACG00000015247	LARP1B	100	61.832	ENSCANG00000026958	LARP1B	99	68.306	Colobus_angolensis_palliatus
ENSLACG00000015247	LARP1B	85	69.578	ENSCGRG00001004660	-	98	71.601	Cricetulus_griseus_chok1gshd
ENSLACG00000015247	LARP1B	85	69.578	ENSCGRG00000001914	-	98	71.601	Cricetulus_griseus_crigri
ENSLACG00000015247	LARP1B	90	57.087	ENSCSEG00000013519	larp1b	93	56.341	Cynoglossus_semilaevis
ENSLACG00000015247	LARP1B	88	59.353	ENSCVAG00000005046	larp1b	90	58.907	Cyprinodon_variegatus
ENSLACG00000015247	LARP1B	93	56.467	ENSDARG00000061169	larp1b	90	58.012	Danio_rerio
ENSLACG00000015247	LARP1B	99	71.100	ENSDNOG00000018765	-	98	74.553	Dasypus_novemcinctus
ENSLACG00000015247	LARP1B	72	75.904	ENSETEG00000012497	LARP1B	88	65.850	Echinops_telfairi
ENSLACG00000015247	LARP1B	99	42.512	ENSEBUG00000003668	larp1b	97	50.837	Eptatretus_burgeri
ENSLACG00000015247	LARP1B	100	70.229	ENSEASG00005018106	LARP1B	99	72.021	Equus_asinus_asinus
ENSLACG00000015247	LARP1B	100	70.229	ENSECAG00000001088	LARP1B	85	72.004	Equus_caballus
ENSLACG00000015247	LARP1B	62	60.323	ENSELUG00000023774	larp1b	95	48.928	Esox_lucius
ENSLACG00000015247	LARP1B	100	70.229	ENSFCAG00000014650	-	98	71.456	Felis_catus
ENSLACG00000015247	LARP1B	100	64.721	ENSFALG00000008098	LARP1B	99	66.558	Ficedula_albicollis
ENSLACG00000015247	LARP1B	89	59.519	ENSFHEG00000010264	larp1b	88	58.517	Fundulus_heteroclitus
ENSLACG00000015247	LARP1B	77	74.638	ENSGMOG00000005207	larp1b	80	75.000	Gadus_morhua
ENSLACG00000015247	LARP1B	99	65.296	ENSGALG00000010207	LARP1B	94	67.215	Gallus_gallus
ENSLACG00000015247	LARP1B	77	66.950	ENSGAFG00000012012	larp1b	93	61.310	Gambusia_affinis
ENSLACG00000015247	LARP1B	90	54.028	ENSGACG00000004609	larp1b	91	55.382	Gasterosteus_aculeatus
ENSLACG00000015247	LARP1B	99	74.169	ENSGAGG00000017209	LARP1B	92	72.393	Gopherus_agassizii
ENSLACG00000015247	LARP1B	100	68.448	ENSGGOG00000015900	LARP1B	99	71.209	Gorilla_gorilla
ENSLACG00000015247	LARP1B	89	59.540	ENSHBUG00000009730	larp1b	93	57.996	Haplochromis_burtoni
ENSLACG00000015247	LARP1B	85	58.788	ENSHGLG00000013922	-	97	59.215	Heterocephalus_glaber_female
ENSLACG00000015247	LARP1B	84	66.667	ENSHGLG00000006728	-	97	67.470	Heterocephalus_glaber_female
ENSLACG00000015247	LARP1B	86	66.964	ENSHGLG00100014041	-	95	67.066	Heterocephalus_glaber_male
ENSLACG00000015247	LARP1B	85	58.788	ENSHGLG00100016491	-	97	59.215	Heterocephalus_glaber_male
ENSLACG00000015247	LARP1B	62	65.685	ENSHCOG00000000918	larp1b	96	65.832	Hippocampus_comes
ENSLACG00000015247	LARP1B	91	57.352	ENSIPUG00000012138	larp1b	90	57.018	Ictalurus_punctatus
ENSLACG00000015247	LARP1B	85	61.934	ENSSTOG00000021917	-	94	62.727	Ictidomys_tridecemlineatus
ENSLACG00000015247	LARP1B	69	57.407	ENSSTOG00000033183	-	90	58.015	Ictidomys_tridecemlineatus
ENSLACG00000015247	LARP1B	85	65.165	ENSSTOG00000008596	-	98	68.072	Ictidomys_tridecemlineatus
ENSLACG00000015247	LARP1B	82	52.960	ENSSTOG00000034510	-	78	56.949	Ictidomys_tridecemlineatus
ENSLACG00000015247	LARP1B	85	66.465	ENSJJAG00000022360	Larp1b	98	67.879	Jaculus_jaculus
ENSLACG00000015247	LARP1B	87	59.407	ENSKMAG00000011589	larp1b	94	57.791	Kryptolebias_marmoratus
ENSLACG00000015247	LARP1B	88	59.919	ENSLBEG00000005655	larp1b	94	58.164	Labrus_bergylta
ENSLACG00000015247	LARP1B	100	64.593	ENSLOCG00000010684	larp1b	97	72.114	Lepisosteus_oculatus
ENSLACG00000015247	LARP1B	85	70.181	ENSLAFG00000008473	-	98	72.205	Loxodonta_africana
ENSLACG00000015247	LARP1B	100	69.466	ENSMFAG00000002218	LARP1B	99	72.057	Macaca_fascicularis
ENSLACG00000015247	LARP1B	57	75.000	ENSMFAG00000003306	-	90	75.912	Macaca_fascicularis
ENSLACG00000015247	LARP1B	100	69.211	ENSMMUG00000021347	LARP1B	99	71.947	Macaca_mulatta
ENSLACG00000015247	LARP1B	53	76.296	ENSMNEG00000027747	-	87	77.206	Macaca_nemestrina
ENSLACG00000015247	LARP1B	72	73.830	ENSMNEG00000030406	LARP1B	96	73.830	Macaca_nemestrina
ENSLACG00000015247	LARP1B	100	63.104	ENSMLEG00000009306	LARP1B	99	69.307	Mandrillus_leucophaeus
ENSLACG00000015247	LARP1B	91	59.198	ENSMAMG00000000081	larp1b	94	59.002	Mastacembelus_armatus
ENSLACG00000015247	LARP1B	82	48.968	ENSMZEG00005002545	larp1b	94	64.754	Maylandia_zebra
ENSLACG00000015247	LARP1B	99	50.478	ENSMGAG00000004809	LARP1B	100	62.348	Meleagris_gallopavo
ENSLACG00000015247	LARP1B	85	69.277	ENSMAUG00000007879	-	98	71.299	Mesocricetus_auratus
ENSLACG00000015247	LARP1B	85	57.485	ENSMICG00000037883	-	91	58.702	Microcebus_murinus
ENSLACG00000015247	LARP1B	99	53.351	ENSMICG00000028052	-	99	54.688	Microcebus_murinus
ENSLACG00000015247	LARP1B	99	71.100	ENSMICG00000036111	LARP1B	99	74.638	Microcebus_murinus
ENSLACG00000015247	LARP1B	67	74.615	ENSMOCG00000001490	Larp1b	92	77.132	Microtus_ochrogaster
ENSLACG00000015247	LARP1B	99	75.192	ENSMODG00000012300	LARP1B	96	67.676	Monodelphis_domestica
ENSLACG00000015247	LARP1B	91	58.806	ENSMALG00000003638	larp1b	93	58.513	Monopterus_albus
ENSLACG00000015247	LARP1B	85	69.369	MGP_CAROLIEiJ_G0024962	Larp1b	98	70.393	Mus_caroli
ENSLACG00000015247	LARP1B	85	69.277	ENSMUSG00000025762	Larp1b	98	70.997	Mus_musculus
ENSLACG00000015247	LARP1B	85	68.976	MGP_PahariEiJ_G0026403	Larp1b	98	70.695	Mus_pahari
ENSLACG00000015247	LARP1B	85	69.277	MGP_SPRETEiJ_G0025897	Larp1b	98	70.997	Mus_spretus
ENSLACG00000015247	LARP1B	100	71.247	ENSMPUG00000017365	LARP1B	87	71.223	Mustela_putorius_furo
ENSLACG00000015247	LARP1B	98	62.864	ENSMLUG00000010229	LARP1B	99	69.471	Myotis_lucifugus
ENSLACG00000015247	LARP1B	74	61.748	ENSNBRG00000023846	larp1b	87	59.079	Neolamprologus_brichardi
ENSLACG00000015247	LARP1B	100	68.702	ENSNLEG00000013819	LARP1B	99	70.801	Nomascus_leucogenys
ENSLACG00000015247	LARP1B	71	72.780	ENSMEUG00000010308	LARP1B	87	72.780	Notamacropus_eugenii
ENSLACG00000015247	LARP1B	73	72.125	ENSOPRG00000005478	LARP1B	92	63.443	Ochotona_princeps
ENSLACG00000015247	LARP1B	84	67.173	ENSODEG00000001292	-	97	66.972	Octodon_degus
ENSLACG00000015247	LARP1B	99	47.816	ENSONIG00000012386	larp1b	100	59.346	Oreochromis_niloticus
ENSLACG00000015247	LARP1B	99	70.332	ENSOCUG00000013330	LARP1B	97	71.524	Oryctolagus_cuniculus
ENSLACG00000015247	LARP1B	89	56.843	ENSORLG00000017954	larp1b	91	57.443	Oryzias_latipes
ENSLACG00000015247	LARP1B	90	56.735	ENSORLG00020013081	larp1b	92	57.185	Oryzias_latipes_hni
ENSLACG00000015247	LARP1B	90	57.384	ENSORLG00015009580	larp1b	92	57.696	Oryzias_latipes_hsok
ENSLACG00000015247	LARP1B	90	57.555	ENSOMEG00000004210	larp1b	92	57.555	Oryzias_melastigma
ENSLACG00000015247	LARP1B	100	67.766	ENSOGAG00000005771	LARP1B	100	73.834	Otolemur_garnettii
ENSLACG00000015247	LARP1B	100	67.766	ENSOARG00000015300	LARP1B	99	70.504	Ovis_aries
ENSLACG00000015247	LARP1B	100	68.448	ENSPPAG00000030439	LARP1B	99	71.429	Pan_paniscus
ENSLACG00000015247	LARP1B	100	70.229	ENSPPRG00000002743	-	98	71.456	Panthera_pardus
ENSLACG00000015247	LARP1B	100	70.229	ENSPTIG00000011225	LARP1B	98	71.456	Panthera_tigris_altaica
ENSLACG00000015247	LARP1B	100	68.193	ENSPTRG00000016437	LARP1B	99	71.319	Pan_troglodytes
ENSLACG00000015247	LARP1B	100	69.466	ENSPANG00000012488	LARP1B	99	72.057	Papio_anubis
ENSLACG00000015247	LARP1B	87	52.033	ENSPKIG00000014360	larp1b	75	59.026	Paramormyrops_kingsleyae
ENSLACG00000015247	LARP1B	99	72.123	ENSPSIG00000012885	LARP1B	99	74.573	Pelodiscus_sinensis
ENSLACG00000015247	LARP1B	66	64.196	ENSPMGG00000007207	larp1b	86	64.276	Periophthalmus_magnuspinnatus
ENSLACG00000015247	LARP1B	60	59.828	ENSPMAG00000002700	larp1b	98	55.485	Petromyzon_marinus
ENSLACG00000015247	LARP1B	99	73.402	ENSPCIG00000026516	LARP1B	97	78.825	Phascolarctos_cinereus
ENSLACG00000015247	LARP1B	99	46.793	ENSPFOG00000022837	-	95	49.626	Poecilia_formosa
ENSLACG00000015247	LARP1B	93	57.223	ENSPFOG00000019519	larp1b	93	57.388	Poecilia_formosa
ENSLACG00000015247	LARP1B	91	58.658	ENSPLAG00000007115	larp1b	93	58.260	Poecilia_latipinna
ENSLACG00000015247	LARP1B	91	59.095	ENSPMEG00000001224	larp1b	89	59.615	Poecilia_mexicana
ENSLACG00000015247	LARP1B	65	56.489	ENSPREG00000005955	-	83	55.682	Poecilia_reticulata
ENSLACG00000015247	LARP1B	100	69.466	ENSPCAG00000007546	LARP1B	99	69.813	Procavia_capensis
ENSLACG00000015247	LARP1B	99	70.588	ENSPCOG00000021874	LARP1B	98	72.320	Propithecus_coquereli
ENSLACG00000015247	LARP1B	100	66.158	ENSPVAG00000005373	LARP1B	99	67.370	Pteropus_vampyrus
ENSLACG00000015247	LARP1B	62	68.135	ENSPNYG00000017357	larp1b	94	63.833	Pundamilia_nyererei
ENSLACG00000015247	LARP1B	88	57.814	ENSPNAG00000008823	larp1b	90	57.805	Pygocentrus_nattereri
ENSLACG00000015247	LARP1B	85	69.880	ENSRNOG00000038366	Larp1b	98	71.601	Rattus_norvegicus
ENSLACG00000015247	LARP1B	100	69.643	ENSRBIG00000039982	-	99	70.428	Rhinopithecus_bieti
ENSLACG00000015247	LARP1B	85	62.048	ENSRBIG00000038568	-	90	62.840	Rhinopithecus_bieti
ENSLACG00000015247	LARP1B	85	54.217	ENSRROG00000038525	-	94	55.891	Rhinopithecus_roxellana
ENSLACG00000015247	LARP1B	100	69.466	ENSRROG00000030771	LARP1B	99	71.947	Rhinopithecus_roxellana
ENSLACG00000015247	LARP1B	99	74.169	ENSSHAG00000014474	LARP1B	99	74.102	Sarcophilus_harrisii
ENSLACG00000015247	LARP1B	99	46.226	ENSSMAG00000006347	larp1b	97	57.938	Scophthalmus_maximus
ENSLACG00000015247	LARP1B	88	59.980	ENSSDUG00000004182	larp1b	91	58.713	Seriola_dumerili
ENSLACG00000015247	LARP1B	81	64.748	ENSSLDG00000014613	larp1b	91	62.088	Seriola_lalandi_dorsalis
ENSLACG00000015247	LARP1B	99	71.939	ENSSPUG00000011837	LARP1B	96	66.667	Sphenodon_punctatus
ENSLACG00000015247	LARP1B	88	59.375	ENSSPAG00000017772	larp1b	92	58.144	Stegastes_partitus
ENSLACG00000015247	LARP1B	99	70.918	ENSSSCG00000034280	LARP1B	99	88.095	Sus_scrofa
ENSLACG00000015247	LARP1B	54	51.659	ENSSSCG00000040491	-	67	66.892	Sus_scrofa
ENSLACG00000015247	LARP1B	68	72.886	ENSTGUG00000002098	-	91	72.360	Taeniopygia_guttata
ENSLACG00000015247	LARP1B	90	56.943	ENSTRUG00000005612	larp1b	91	56.331	Takifugu_rubripes
ENSLACG00000015247	LARP1B	99	45.662	ENSTNIG00000012398	larp1b	91	67.064	Tetraodon_nigroviridis
ENSLACG00000015247	LARP1B	68	66.864	ENSTBEG00000004177	LARP1B	81	72.222	Tupaia_belangeri
ENSLACG00000015247	LARP1B	81	74.062	ENSTTRG00000012984	LARP1B	91	69.892	Tursiops_truncatus
ENSLACG00000015247	LARP1B	85	60.843	ENSUAMG00000016938	-	98	59.940	Ursus_americanus
ENSLACG00000015247	LARP1B	100	70.483	ENSUMAG00000007373	LARP1B	97	73.081	Ursus_maritimus
ENSLACG00000015247	LARP1B	100	58.270	ENSVPAG00000007223	LARP1B	99	60.879	Vicugna_pacos
ENSLACG00000015247	LARP1B	100	70.992	ENSVVUG00000011307	LARP1B	99	72.656	Vulpes_vulpes
ENSLACG00000015247	LARP1B	99	56.423	ENSXETG00000022512	larp1b	93	61.740	Xenopus_tropicalis
ENSLACG00000015247	LARP1B	68	64.923	ENSXCOG00000004435	larp1b	81	63.111	Xiphophorus_couchianus
ENSLACG00000015247	LARP1B	91	58.487	ENSXMAG00000008150	larp1b	94	57.251	Xiphophorus_maculatus