EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000015283 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 74589 bases
Position: chrJH127018.1:1219044-1293632
Accession: 102346211
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000017351	Ago_hook	PF10427.9	6.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000017478	TNRC6C-201	5211	XM_005998542	ENSLACP00000017351	1736 (aa)	-	H3B630

Gene Model

Click here to download ENSLACG00000015283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015283's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000015283	TNRC6C	100	42.283	ENSLACG00000006277	TNRC6A	93	42.251
ENSLACG00000015283	TNRC6C	73	36.095	ENSLACG00000000628	-	82	39.247

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000015283	TNRC6C	100	74.263	ENSG00000078687	TNRC6C	100	80.000	Homo_sapiens
ENSLACG00000015283	TNRC6C	77	52.323	ENSAPOG00000019749	tnrc6c1	96	48.846	Acanthochromis_polyacanthus
ENSLACG00000015283	TNRC6C	99	72.642	ENSAMEG00000013756	TNRC6C	99	72.586	Ailuropoda_melanoleuca
ENSLACG00000015283	TNRC6C	89	65.922	ENSACIG00000008075	tnrc6c1	87	66.480	Amphilophus_citrinellus
ENSLACG00000015283	TNRC6C	73	63.212	ENSAOCG00000023968	tnrc6c1	90	62.827	Amphiprion_ocellaris
ENSLACG00000015283	TNRC6C	73	63.212	ENSAPEG00000009020	tnrc6c1	90	62.827	Amphiprion_percula
ENSLACG00000015283	TNRC6C	96	80.027	ENSAPLG00000005456	TNRC6C	87	80.428	Anas_platyrhynchos
ENSLACG00000015283	TNRC6C	96	81.334	ENSACAG00000016198	TNRC6C	86	81.132	Anolis_carolinensis
ENSLACG00000015283	TNRC6C	100	74.124	ENSANAG00000021554	TNRC6C	100	75.763	Aotus_nancymaae
ENSLACG00000015283	TNRC6C	95	66.480	ENSACLG00000000424	tnrc6c1	70	66.667	Astatotilapia_calliptera
ENSLACG00000015283	TNRC6C	100	71.373	ENSBTAG00000018658	TNRC6C	100	73.036	Bos_taurus
ENSLACG00000015283	TNRC6C	100	73.915	ENSCJAG00000019431	TNRC6C	100	75.249	Callithrix_jacchus
ENSLACG00000015283	TNRC6C	99	74.329	ENSCAFG00000005224	TNRC6C	99	67.204	Canis_familiaris
ENSLACG00000015283	TNRC6C	99	75.497	ENSCAFG00020006661	TNRC6C	100	75.088	Canis_lupus_dingo
ENSLACG00000015283	TNRC6C	100	72.945	ENSCHIG00000026004	TNRC6C	100	71.454	Capra_hircus
ENSLACG00000015283	TNRC6C	97	74.871	ENSTSYG00000005403	TNRC6C	100	74.670	Carlito_syrichta
ENSLACG00000015283	TNRC6C	100	69.802	ENSCAPG00000007307	TNRC6C	92	69.864	Cavia_aperea
ENSLACG00000015283	TNRC6C	100	74.116	ENSCPOG00000000467	TNRC6C	100	74.116	Cavia_porcellus
ENSLACG00000015283	TNRC6C	100	74.082	ENSCCAG00000030524	TNRC6C	100	75.484	Cebus_capucinus
ENSLACG00000015283	TNRC6C	100	74.138	ENSCATG00000033135	TNRC6C	100	75.601	Cercocebus_atys
ENSLACG00000015283	TNRC6C	100	75.371	ENSCLAG00000011139	TNRC6C	92	75.143	Chinchilla_lanigera
ENSLACG00000015283	TNRC6C	99	74.511	ENSCSAG00000005167	TNRC6C	92	74.484	Chlorocebus_sabaeus
ENSLACG00000015283	TNRC6C	73	79.557	ENSCHOG00000000088	TNRC6C	73	80.236	Choloepus_hoffmanni
ENSLACG00000015283	TNRC6C	100	78.938	ENSCPBG00000027960	TNRC6C	100	78.320	Chrysemys_picta_bellii
ENSLACG00000015283	TNRC6C	100	73.915	ENSCANG00000041771	TNRC6C	100	75.015	Colobus_angolensis_palliatus
ENSLACG00000015283	TNRC6C	100	74.078	ENSCGRG00001022686	Tnrc6c	100	73.746	Cricetulus_griseus_chok1gshd
ENSLACG00000015283	TNRC6C	100	74.416	ENSCGRG00000018041	Tnrc6c	100	73.746	Cricetulus_griseus_crigri
ENSLACG00000015283	TNRC6C	77	50.793	ENSCSEG00000012744	tnrc6c1	93	47.118	Cynoglossus_semilaevis
ENSLACG00000015283	TNRC6C	99	50.572	ENSDARG00000076847	tnrc6c1	99	51.308	Danio_rerio
ENSLACG00000015283	TNRC6C	100	73.564	ENSDNOG00000003247	TNRC6C	94	73.884	Dasypus_novemcinctus
ENSLACG00000015283	TNRC6C	100	71.283	ENSDORG00000004558	Tnrc6c	100	71.612	Dipodomys_ordii
ENSLACG00000015283	TNRC6C	89	70.167	ENSETEG00000005527	TNRC6C	89	69.928	Echinops_telfairi
ENSLACG00000015283	TNRC6C	97	75.044	ENSEASG00005004799	TNRC6C	100	74.750	Equus_asinus_asinus
ENSLACG00000015283	TNRC6C	100	75.471	ENSECAG00000012486	TNRC6C	92	75.185	Equus_caballus
ENSLACG00000015283	TNRC6C	96	78.655	ENSEEUG00000010008	TNRC6C	96	77.441	Erinaceus_europaeus
ENSLACG00000015283	TNRC6C	100	72.404	ENSFCAG00000028358	TNRC6C	100	73.857	Felis_catus
ENSLACG00000015283	TNRC6C	93	80.851	ENSFALG00000000848	TNRC6C	94	80.851	Ficedula_albicollis
ENSLACG00000015283	TNRC6C	100	74.914	ENSFDAG00000010368	TNRC6C	100	74.857	Fukomys_damarensis
ENSLACG00000015283	TNRC6C	71	62.304	ENSFHEG00000002936	tnrc6c1	90	62.827	Fundulus_heteroclitus
ENSLACG00000015283	TNRC6C	100	76.161	ENSGALG00000001725	TNRC6C	100	78.576	Gallus_gallus
ENSLACG00000015283	TNRC6C	95	61.856	ENSGAFG00000019019	tnrc6c1	100	46.744	Gambusia_affinis
ENSLACG00000015283	TNRC6C	91	50.835	ENSGACG00000012320	tnrc6c1	90	46.656	Gasterosteus_aculeatus
ENSLACG00000015283	TNRC6C	100	78.380	ENSGAGG00000022043	TNRC6C	98	77.981	Gopherus_agassizii
ENSLACG00000015283	TNRC6C	100	73.722	ENSGGOG00000011304	TNRC6C	100	75.161	Gorilla_gorilla
ENSLACG00000015283	TNRC6C	95	66.480	ENSHBUG00000010846	tnrc6c1	69	66.667	Haplochromis_burtoni
ENSLACG00000015283	TNRC6C	100	75.457	ENSHGLG00000004809	TNRC6C	92	75.171	Heterocephalus_glaber_female
ENSLACG00000015283	TNRC6C	100	74.716	ENSHGLG00100012597	TNRC6C	92	74.659	Heterocephalus_glaber_male
ENSLACG00000015283	TNRC6C	99	51.525	ENSIPUG00000000818	tnrc6c1	92	51.801	Ictalurus_punctatus
ENSLACG00000015283	TNRC6C	100	74.829	ENSSTOG00000009101	TNRC6C	100	74.658	Ictidomys_tridecemlineatus
ENSLACG00000015283	TNRC6C	100	72.547	ENSJJAG00000017055	Tnrc6c	91	72.320	Jaculus_jaculus
ENSLACG00000015283	TNRC6C	73	67.039	ENSKMAG00000021023	tnrc6c1	84	67.039	Kryptolebias_marmoratus
ENSLACG00000015283	TNRC6C	100	55.941	ENSLOCG00000013377	tnrc6c1	92	56.599	Lepisosteus_oculatus
ENSLACG00000015283	TNRC6C	100	75.356	ENSLAFG00000011122	TNRC6C	99	69.329	Loxodonta_africana
ENSLACG00000015283	TNRC6C	100	74.138	ENSMFAG00000043943	TNRC6C	100	75.601	Macaca_fascicularis
ENSLACG00000015283	TNRC6C	100	74.581	ENSMMUG00000011924	TNRC6C	100	75.601	Macaca_mulatta
ENSLACG00000015283	TNRC6C	100	74.138	ENSMNEG00000030405	TNRC6C	100	75.601	Macaca_nemestrina
ENSLACG00000015283	TNRC6C	100	74.138	ENSMLEG00000033436	TNRC6C	100	75.601	Mandrillus_leucophaeus
ENSLACG00000015283	TNRC6C	90	62.887	ENSMAMG00000023613	tnrc6c1	92	65.363	Mastacembelus_armatus
ENSLACG00000015283	TNRC6C	95	66.480	ENSMZEG00005010920	tnrc6c1	70	66.667	Maylandia_zebra
ENSLACG00000015283	TNRC6C	90	79.611	ENSMGAG00000003906	TNRC6C	83	79.539	Meleagris_gallopavo
ENSLACG00000015283	TNRC6C	97	73.816	ENSMAUG00000021618	Tnrc6c	100	73.641	Mesocricetus_auratus
ENSLACG00000015283	TNRC6C	100	74.847	ENSMICG00000003952	TNRC6C	100	76.174	Microcebus_murinus
ENSLACG00000015283	TNRC6C	100	75.613	ENSMOCG00000015879	Tnrc6c	100	75.442	Microtus_ochrogaster
ENSLACG00000015283	TNRC6C	75	52.662	ENSMMOG00000005203	tnrc6c1	100	48.041	Mola_mola
ENSLACG00000015283	TNRC6C	100	76.134	ENSMODG00000001785	TNRC6C	92	75.850	Monodelphis_domestica
ENSLACG00000015283	TNRC6C	100	75.214	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	75.100	Mus_caroli
ENSLACG00000015283	TNRC6C	100	74.701	ENSMUSG00000025571	Tnrc6c	100	74.587	Mus_musculus
ENSLACG00000015283	TNRC6C	100	74.986	MGP_PahariEiJ_G0018593	Tnrc6c	100	74.815	Mus_pahari
ENSLACG00000015283	TNRC6C	100	74.758	MGP_SPRETEiJ_G0018309	Tnrc6c	100	74.644	Mus_spretus
ENSLACG00000015283	TNRC6C	99	72.539	ENSMPUG00000013348	TNRC6C	91	72.260	Mustela_putorius_furo
ENSLACG00000015283	TNRC6C	100	68.073	ENSMLUG00000014431	TNRC6C	91	68.795	Myotis_lucifugus
ENSLACG00000015283	TNRC6C	100	74.574	ENSNGAG00000012203	Tnrc6c	92	74.518	Nannospalax_galili
ENSLACG00000015283	TNRC6C	95	66.480	ENSNBRG00000005344	tnrc6c1	77	50.000	Neolamprologus_brichardi
ENSLACG00000015283	TNRC6C	99	72.510	ENSNLEG00000000047	TNRC6C	92	72.207	Nomascus_leucogenys
ENSLACG00000015283	TNRC6C	98	71.065	ENSMEUG00000005104	TNRC6C	100	71.007	Notamacropus_eugenii
ENSLACG00000015283	TNRC6C	97	75.059	ENSODEG00000012499	TNRC6C	100	75.059	Octodon_degus
ENSLACG00000015283	TNRC6C	97	47.042	ENSONIG00000002210	tnrc6c1	98	52.061	Oreochromis_niloticus
ENSLACG00000015283	TNRC6C	100	89.362	ENSOANG00000009758	-	67	89.362	Ornithorhynchus_anatinus
ENSLACG00000015283	TNRC6C	99	45.479	ENSORLG00000009837	tnrc6c1	98	45.679	Oryzias_latipes
ENSLACG00000015283	TNRC6C	95	61.658	ENSORLG00020016510	tnrc6c1	92	63.212	Oryzias_latipes_hni
ENSLACG00000015283	TNRC6C	80	42.982	ENSORLG00015000171	tnrc6c1	98	43.377	Oryzias_latipes_hsok
ENSLACG00000015283	TNRC6C	95	61.856	ENSOMEG00000000357	tnrc6c1	90	63.402	Oryzias_melastigma
ENSLACG00000015283	TNRC6C	97	72.915	ENSOGAG00000007197	TNRC6C	100	72.659	Otolemur_garnettii
ENSLACG00000015283	TNRC6C	96	68.280	ENSOARG00000006041	TNRC6C	90	68.298	Ovis_aries
ENSLACG00000015283	TNRC6C	100	74.249	ENSPPAG00000027160	TNRC6C	100	75.601	Pan_paniscus
ENSLACG00000015283	TNRC6C	100	72.404	ENSPPRG00000018881	TNRC6C	100	73.857	Panthera_pardus
ENSLACG00000015283	TNRC6C	74	60.336	ENSPTIG00000008791	TNRC6C	69	60.474	Panthera_tigris_altaica
ENSLACG00000015283	TNRC6C	100	74.305	ENSPTRG00000009699	TNRC6C	100	75.660	Pan_troglodytes
ENSLACG00000015283	TNRC6C	100	74.138	ENSPANG00000019994	TNRC6C	100	75.543	Papio_anubis
ENSLACG00000015283	TNRC6C	89	71.271	ENSPKIG00000005428	tnrc6c1	100	48.885	Paramormyrops_kingsleyae
ENSLACG00000015283	TNRC6C	100	77.029	ENSPSIG00000018069	TNRC6C	100	76.857	Pelodiscus_sinensis
ENSLACG00000015283	TNRC6C	79	66.867	ENSPMGG00000022911	tnrc6c1	89	67.857	Periophthalmus_magnuspinnatus
ENSLACG00000015283	TNRC6C	100	74.901	ENSPEMG00000009785	Tnrc6c	100	72.531	Peromyscus_maniculatus_bairdii
ENSLACG00000015283	TNRC6C	56	77.347	ENSPCIG00000017421	-	99	77.245	Phascolarctos_cinereus
ENSLACG00000015283	TNRC6C	95	61.538	ENSPFOG00000012560	tnrc6c1	83	62.051	Poecilia_formosa
ENSLACG00000015283	TNRC6C	92	68.333	ENSPLAG00000021055	tnrc6c1	92	68.333	Poecilia_latipinna
ENSLACG00000015283	TNRC6C	100	74.693	ENSPPYG00000008679	TNRC6C	91	74.554	Pongo_abelii
ENSLACG00000015283	TNRC6C	94	68.213	ENSPCAG00000012510	TNRC6C	94	68.213	Procavia_capensis
ENSLACG00000015283	TNRC6C	97	76.481	ENSPCOG00000021451	TNRC6C	100	76.305	Propithecus_coquereli
ENSLACG00000015283	TNRC6C	93	79.661	ENSPVAG00000002008	TNRC6C	94	79.661	Pteropus_vampyrus
ENSLACG00000015283	TNRC6C	95	66.480	ENSPNYG00000014477	tnrc6c1	70	62.176	Pundamilia_nyererei
ENSLACG00000015283	TNRC6C	97	74.443	ENSRNOG00000022395	Tnrc6c	100	74.267	Rattus_norvegicus
ENSLACG00000015283	TNRC6C	100	74.138	ENSRBIG00000027777	TNRC6C	100	75.601	Rhinopithecus_bieti
ENSLACG00000015283	TNRC6C	100	74.082	ENSRROG00000042912	TNRC6C	100	75.543	Rhinopithecus_roxellana
ENSLACG00000015283	TNRC6C	100	74.051	ENSSBOG00000023981	TNRC6C	100	73.536	Saimiri_boliviensis_boliviensis
ENSLACG00000015283	TNRC6C	66	57.746	ENSSFOG00015004735	-	70	70.408	Scleropages_formosus
ENSLACG00000015283	TNRC6C	99	46.104	ENSSMAG00000012761	tnrc6c1	99	47.979	Scophthalmus_maximus
ENSLACG00000015283	TNRC6C	99	47.179	ENSSDUG00000002366	tnrc6c1	96	48.425	Seriola_dumerili
ENSLACG00000015283	TNRC6C	97	46.328	ENSSLDG00000025613	tnrc6c1	100	47.264	Seriola_lalandi_dorsalis
ENSLACG00000015283	TNRC6C	88	81.513	ENSSARG00000006816	TNRC6C	88	81.513	Sorex_araneus
ENSLACG00000015283	TNRC6C	75	82.447	ENSSPUG00000007341	TNRC6C	85	80.368	Sphenodon_punctatus
ENSLACG00000015283	TNRC6C	71	60.843	ENSSPAG00000014977	tnrc6c1	88	59.172	Stegastes_partitus
ENSLACG00000015283	TNRC6C	97	70.270	ENSSSCG00000034373	TNRC6C	100	70.447	Sus_scrofa
ENSLACG00000015283	TNRC6C	100	79.062	ENSTGUG00000007733	TNRC6C	100	79.233	Taeniopygia_guttata
ENSLACG00000015283	TNRC6C	86	64.324	ENSTRUG00000011685	tnrc6c1	94	58.738	Takifugu_rubripes
ENSLACG00000015283	TNRC6C	77	51.079	ENSTNIG00000005273	tnrc6c1	87	65.000	Tetraodon_nigroviridis
ENSLACG00000015283	TNRC6C	59	72.881	ENSTBEG00000005046	TNRC6C	95	73.366	Tupaia_belangeri
ENSLACG00000015283	TNRC6C	100	75.542	ENSTTRG00000010828	TNRC6C	99	75.200	Tursiops_truncatus
ENSLACG00000015283	TNRC6C	99	73.243	ENSUMAG00000013614	TNRC6C	92	73.129	Ursus_maritimus
ENSLACG00000015283	TNRC6C	97	75.558	ENSVVUG00000015268	TNRC6C	100	75.382	Vulpes_vulpes
ENSLACG00000015283	TNRC6C	97	68.535	ENSXETG00000019470	tnrc6c	100	68.575	Xenopus_tropicalis
ENSLACG00000015283	TNRC6C	99	47.550	ENSXMAG00000025971	tnrc6c1	100	46.383	Xiphophorus_maculatus