EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000015309 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA4
Alias: BAF190|BRG1|FLJ39786|SNF2|SNF2-BETA|SNF2L4|SNF2LB|SWI2|hSNF2b
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 37890 bases
Position: chrJH126759.1:1225896-1263785
Accession: 11100
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000017381	ResIII	PF04851.15	3.7e-10	1	1
ENSLACP00000017381	BRK	PF07533.16	5.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000017509	SMARCA4-201	2466	-	ENSLACP00000017381	822 (aa)	-	H3B660

Gene Model

Click here to download ENSLACG00000015309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015309's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000015309	SMARCA4	86	61.423	ENSLACG00000000270	SMARCA2	80	62.572

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000015309	SMARCA4	100	88.425	ENSG00000127616	SMARCA4	93	82.873	Homo_sapiens
ENSLACG00000015309	SMARCA4	100	77.778	ENSAPOG00000004542	SMARCA4	56	78.580	Acanthochromis_polyacanthus
ENSLACG00000015309	SMARCA4	100	88.038	ENSAMEG00000010868	SMARCA4	50	88.544	Ailuropoda_melanoleuca
ENSLACG00000015309	SMARCA4	100	77.174	ENSACIG00000003035	-	51	78.623	Amphilophus_citrinellus
ENSLACG00000015309	SMARCA4	100	81.594	ENSACIG00000021550	smarca4a	52	80.657	Amphilophus_citrinellus
ENSLACG00000015309	SMARCA4	100	80.526	ENSAOCG00000009450	-	53	81.094	Amphiprion_ocellaris
ENSLACG00000015309	SMARCA4	100	79.447	ENSAOCG00000019167	smarca4a	57	79.447	Amphiprion_ocellaris
ENSLACG00000015309	SMARCA4	100	79.447	ENSAPEG00000015559	smarca4a	57	79.447	Amphiprion_percula
ENSLACG00000015309	SMARCA4	100	77.240	ENSATEG00000001094	-	52	76.906	Anabas_testudineus
ENSLACG00000015309	SMARCA4	100	80.729	ENSATEG00000011524	smarca4a	52	81.455	Anabas_testudineus
ENSLACG00000015309	SMARCA4	100	88.425	ENSANAG00000036991	SMARCA4	50	88.902	Aotus_nancymaae
ENSLACG00000015309	SMARCA4	100	77.123	ENSACLG00000008638	-	54	77.010	Astatotilapia_calliptera
ENSLACG00000015309	SMARCA4	100	83.454	ENSACLG00000000163	smarca4a	51	84.077	Astatotilapia_calliptera
ENSLACG00000015309	SMARCA4	100	77.509	ENSAMXG00000021023	smarca4a	50	79.081	Astyanax_mexicanus
ENSLACG00000015309	SMARCA4	100	80.992	ENSAMXG00000011238	-	54	81.538	Astyanax_mexicanus
ENSLACG00000015309	SMARCA4	100	89.130	ENSBTAG00000019220	SMARCA4	51	89.157	Bos_taurus
ENSLACG00000015309	SMARCA4	100	88.425	ENSCJAG00000005936	SMARCA4	50	88.902	Callithrix_jacchus
ENSLACG00000015309	SMARCA4	100	88.397	ENSCAFG00000017584	SMARCA4	52	88.902	Canis_familiaris
ENSLACG00000015309	SMARCA4	100	88.397	ENSCAFG00020024620	SMARCA4	51	88.902	Canis_lupus_dingo
ENSLACG00000015309	SMARCA4	100	84.838	ENSCHIG00000015318	SMARCA4	52	84.034	Capra_hircus
ENSLACG00000015309	SMARCA4	100	89.251	ENSTSYG00000012966	SMARCA4	52	88.544	Carlito_syrichta
ENSLACG00000015309	SMARCA4	100	88.038	ENSCPOG00000015549	SMARCA4	52	88.517	Cavia_porcellus
ENSLACG00000015309	SMARCA4	100	83.294	ENSCCAG00000031660	SMARCA4	50	83.771	Cebus_capucinus
ENSLACG00000015309	SMARCA4	100	88.425	ENSCATG00000029530	SMARCA4	52	88.902	Cercocebus_atys
ENSLACG00000015309	SMARCA4	100	88.768	ENSCLAG00000011946	SMARCA4	52	89.010	Chinchilla_lanigera
ENSLACG00000015309	SMARCA4	100	89.196	ENSCPBG00000009994	SMARCA4	52	89.436	Chrysemys_picta_bellii
ENSLACG00000015309	SMARCA4	100	88.425	ENSCANG00000036013	SMARCA4	52	88.902	Colobus_angolensis_palliatus
ENSLACG00000015309	SMARCA4	100	88.158	ENSCGRG00001016732	Smarca4	52	88.544	Cricetulus_griseus_chok1gshd
ENSLACG00000015309	SMARCA4	100	88.158	ENSCGRG00000017242	Smarca4	53	88.544	Cricetulus_griseus_crigri
ENSLACG00000015309	SMARCA4	100	80.657	ENSCSEG00000014771	smarca4a	52	81.125	Cynoglossus_semilaevis
ENSLACG00000015309	SMARCA4	100	80.376	ENSCVAG00000006979	smarca4a	52	81.669	Cyprinodon_variegatus
ENSLACG00000015309	SMARCA4	100	80.838	ENSCVAG00000003018	-	52	81.557	Cyprinodon_variegatus
ENSLACG00000015309	SMARCA4	100	78.941	ENSDARG00000104339	SMARCA4	54	79.529	Danio_rerio
ENSLACG00000015309	SMARCA4	100	81.520	ENSDARG00000077226	smarca4a	52	81.170	Danio_rerio
ENSLACG00000015309	SMARCA4	99	80.488	ENSDNOG00000048847	SMARCA4	50	83.509	Dasypus_novemcinctus
ENSLACG00000015309	SMARCA4	100	82.297	ENSDORG00000002544	Smarca4	56	81.981	Dipodomys_ordii
ENSLACG00000015309	SMARCA4	100	76.322	ENSETEG00000013361	SMARCA4	51	76.683	Echinops_telfairi
ENSLACG00000015309	SMARCA4	100	88.038	ENSEASG00005006167	SMARCA4	51	88.544	Equus_asinus_asinus
ENSLACG00000015309	SMARCA4	100	88.038	ENSECAG00000008334	SMARCA4	52	88.544	Equus_caballus
ENSLACG00000015309	SMARCA4	100	82.588	ENSELUG00000010247	smarca4a	52	82.471	Esox_lucius
ENSLACG00000015309	SMARCA4	100	88.397	ENSFCAG00000004894	SMARCA4	52	88.902	Felis_catus
ENSLACG00000015309	SMARCA4	73	89.327	ENSFALG00000004208	SMARCA4	52	82.812	Ficedula_albicollis
ENSLACG00000015309	SMARCA4	100	87.890	ENSFDAG00000012237	SMARCA4	55	88.609	Fukomys_damarensis
ENSLACG00000015309	SMARCA4	100	78.291	ENSFHEG00000010182	smarca4a	52	79.561	Fundulus_heteroclitus
ENSLACG00000015309	SMARCA4	100	76.429	ENSFHEG00000007902	-	53	76.923	Fundulus_heteroclitus
ENSLACG00000015309	SMARCA4	100	87.995	ENSGALG00000047145	SMARCA4	71	87.904	Gallus_gallus
ENSLACG00000015309	SMARCA4	94	81.749	ENSGAFG00000014900	smarca4a	54	82.192	Gambusia_affinis
ENSLACG00000015309	SMARCA4	100	79.004	ENSGACG00000016033	-	51	79.147	Gasterosteus_aculeatus
ENSLACG00000015309	SMARCA4	100	79.883	ENSGACG00000006691	smarca4a	52	79.883	Gasterosteus_aculeatus
ENSLACG00000015309	SMARCA4	100	89.076	ENSGAGG00000016757	SMARCA4	52	89.316	Gopherus_agassizii
ENSLACG00000015309	SMARCA4	100	88.425	ENSGGOG00000009882	SMARCA4	52	88.902	Gorilla_gorilla
ENSLACG00000015309	SMARCA4	100	83.918	ENSHBUG00000021172	smarca4a	50	83.696	Haplochromis_burtoni
ENSLACG00000015309	SMARCA4	100	77.123	ENSHBUG00000005447	-	53	77.010	Haplochromis_burtoni
ENSLACG00000015309	SMARCA4	100	88.038	ENSHGLG00000010519	SMARCA4	52	88.124	Heterocephalus_glaber_female
ENSLACG00000015309	SMARCA4	100	87.679	ENSHGLG00100013774	SMARCA4	52	87.351	Heterocephalus_glaber_male
ENSLACG00000015309	SMARCA4	100	80.986	ENSHCOG00000009510	smarca4a	53	81.221	Hippocampus_comes
ENSLACG00000015309	SMARCA4	100	78.810	ENSIPUG00000016346	-	52	78.698	Ictalurus_punctatus
ENSLACG00000015309	SMARCA4	100	81.754	ENSIPUG00000006107	smarca4a	52	81.170	Ictalurus_punctatus
ENSLACG00000015309	SMARCA4	100	88.038	ENSSTOG00000007939	SMARCA4	52	88.544	Ictidomys_tridecemlineatus
ENSLACG00000015309	SMARCA4	100	87.799	ENSJJAG00000012877	Smarca4	51	88.397	Jaculus_jaculus
ENSLACG00000015309	SMARCA4	100	79.786	ENSKMAG00000019518	-	53	81.078	Kryptolebias_marmoratus
ENSLACG00000015309	SMARCA4	100	81.620	ENSKMAG00000011931	smarca4a	52	80.896	Kryptolebias_marmoratus
ENSLACG00000015309	SMARCA4	100	80.815	ENSLBEG00000017383	smarca4a	53	80.072	Labrus_bergylta
ENSLACG00000015309	SMARCA4	100	79.302	ENSLOCG00000007820	smarca4a	51	78.554	Lepisosteus_oculatus
ENSLACG00000015309	SMARCA4	100	88.517	ENSLAFG00000001433	SMARCA4	52	89.021	Loxodonta_africana
ENSLACG00000015309	SMARCA4	100	88.425	ENSMFAG00000032146	SMARCA4	51	88.902	Macaca_fascicularis
ENSLACG00000015309	SMARCA4	100	88.425	ENSMMUG00000012042	SMARCA4	52	88.902	Macaca_mulatta
ENSLACG00000015309	SMARCA4	100	88.517	ENSMNEG00000028512	SMARCA4	52	89.115	Macaca_nemestrina
ENSLACG00000015309	SMARCA4	100	88.544	ENSMLEG00000034976	SMARCA4	52	88.783	Mandrillus_leucophaeus
ENSLACG00000015309	SMARCA4	100	80.626	ENSMAMG00000002841	-	53	81.227	Mastacembelus_armatus
ENSLACG00000015309	SMARCA4	100	81.378	ENSMAMG00000009256	smarca4a	52	80.516	Mastacembelus_armatus
ENSLACG00000015309	SMARCA4	100	79.856	ENSMZEG00005023861	-	55	77.010	Maylandia_zebra
ENSLACG00000015309	SMARCA4	100	83.454	ENSMZEG00005003889	smarca4a	51	84.077	Maylandia_zebra
ENSLACG00000015309	SMARCA4	100	87.799	ENSMAUG00000020731	Smarca4	52	88.305	Mesocricetus_auratus
ENSLACG00000015309	SMARCA4	100	88.397	ENSMICG00000009806	SMARCA4	52	88.902	Microcebus_murinus
ENSLACG00000015309	SMARCA4	100	87.919	ENSMOCG00000022209	Smarca4	52	88.305	Microtus_ochrogaster
ENSLACG00000015309	SMARCA4	100	82.394	ENSMMOG00000007571	smarca4a	55	82.864	Mola_mola
ENSLACG00000015309	SMARCA4	100	88.862	ENSMODG00000006287	SMARCA4	51	89.128	Monodelphis_domestica
ENSLACG00000015309	SMARCA4	100	76.208	ENSMALG00000021534	-	56	75.812	Monopterus_albus
ENSLACG00000015309	SMARCA4	100	82.593	ENSMALG00000003388	smarca4a	51	82.713	Monopterus_albus
ENSLACG00000015309	SMARCA4	100	88.038	MGP_CAROLIEiJ_G0031879	Smarca4	60	88.421	Mus_caroli
ENSLACG00000015309	SMARCA4	100	88.038	ENSMUSG00000032187	Smarca4	60	88.421	Mus_musculus
ENSLACG00000015309	SMARCA4	100	88.675	MGP_PahariEiJ_G0014745	Smarca4	60	88.859	Mus_pahari
ENSLACG00000015309	SMARCA4	100	88.038	MGP_SPRETEiJ_G0033003	Smarca4	60	88.421	Mus_spretus
ENSLACG00000015309	SMARCA4	100	88.397	ENSMPUG00000005711	SMARCA4	52	88.902	Mustela_putorius_furo
ENSLACG00000015309	SMARCA4	100	88.278	ENSMLUG00000004491	-	52	88.663	Myotis_lucifugus
ENSLACG00000015309	SMARCA4	100	88.341	ENSNGAG00000021852	Smarca4	52	88.729	Nannospalax_galili
ENSLACG00000015309	SMARCA4	100	80.672	ENSNBRG00000011457	smarca4a	51	80.192	Neolamprologus_brichardi
ENSLACG00000015309	SMARCA4	100	73.976	ENSNBRG00000018865	-	56	77.831	Neolamprologus_brichardi
ENSLACG00000015309	SMARCA4	100	87.232	ENSNLEG00000012389	SMARCA4	53	87.470	Nomascus_leucogenys
ENSLACG00000015309	SMARCA4	100	85.266	ENSODEG00000017127	SMARCA4	51	85.266	Octodon_degus
ENSLACG00000015309	SMARCA4	100	83.474	ENSONIG00000008196	smarca4a	51	83.634	Oreochromis_niloticus
ENSLACG00000015309	SMARCA4	100	77.237	ENSONIG00000018040	-	53	77.123	Oreochromis_niloticus
ENSLACG00000015309	SMARCA4	100	83.751	ENSOCUG00000001787	SMARCA4	51	84.217	Oryctolagus_cuniculus
ENSLACG00000015309	SMARCA4	94	82.776	ENSORLG00000003955	-	53	75.788	Oryzias_latipes
ENSLACG00000015309	SMARCA4	100	80.683	ENSORLG00000015452	smarca4a	52	80.824	Oryzias_latipes
ENSLACG00000015309	SMARCA4	94	82.714	ENSORLG00020009728	-	53	75.816	Oryzias_latipes_hni
ENSLACG00000015309	SMARCA4	100	80.330	ENSORLG00020004611	smarca4a	57	78.125	Oryzias_latipes_hni
ENSLACG00000015309	SMARCA4	100	75.679	ENSORLG00015007739	-	53	75.901	Oryzias_latipes_hsok
ENSLACG00000015309	SMARCA4	100	81.785	ENSORLG00015016560	smarca4a	80	82.048	Oryzias_latipes_hsok
ENSLACG00000015309	SMARCA4	100	80.874	ENSOMEG00000007486	smarca4a	52	81.014	Oryzias_melastigma
ENSLACG00000015309	SMARCA4	100	88.067	ENSOGAG00000016148	SMARCA4	58	88.571	Otolemur_garnettii
ENSLACG00000015309	SMARCA4	100	89.144	ENSOARG00000017454	SMARCA4	52	89.170	Ovis_aries
ENSLACG00000015309	SMARCA4	100	88.425	ENSPPAG00000043191	SMARCA4	52	88.902	Pan_paniscus
ENSLACG00000015309	SMARCA4	100	88.397	ENSPPRG00000000064	SMARCA4	52	88.902	Panthera_pardus
ENSLACG00000015309	SMARCA4	87	91.011	ENSPTIG00000017447	SMARCA4	51	82.974	Panthera_tigris_altaica
ENSLACG00000015309	SMARCA4	100	88.425	ENSPTRG00000010488	SMARCA4	52	88.902	Pan_troglodytes
ENSLACG00000015309	SMARCA4	100	88.636	ENSPANG00000011042	SMARCA4	51	89.115	Papio_anubis
ENSLACG00000015309	SMARCA4	100	82.181	ENSPKIG00000007770	SMARCA4	52	82.767	Paramormyrops_kingsleyae
ENSLACG00000015309	SMARCA4	100	83.634	ENSPKIG00000010087	-	52	82.151	Paramormyrops_kingsleyae
ENSLACG00000015309	SMARCA4	100	85.594	ENSPSIG00000005547	SMARCA4	50	86.074	Pelodiscus_sinensis
ENSLACG00000015309	SMARCA4	100	88.038	ENSPEMG00000020389	Smarca4	52	88.425	Peromyscus_maniculatus_bairdii
ENSLACG00000015309	SMARCA4	100	88.862	ENSPCIG00000017138	SMARCA4	52	89.128	Phascolarctos_cinereus
ENSLACG00000015309	SMARCA4	100	79.952	ENSPFOG00000007892	smarca4a	52	78.868	Poecilia_formosa
ENSLACG00000015309	SMARCA4	100	80.338	ENSPLAG00000018616	-	51	81.010	Poecilia_latipinna
ENSLACG00000015309	SMARCA4	100	77.636	ENSPLAG00000014294	smarca4a	52	79.398	Poecilia_latipinna
ENSLACG00000015309	SMARCA4	100	78.497	ENSPMEG00000003725	smarca4a	53	79.099	Poecilia_mexicana
ENSLACG00000015309	SMARCA4	100	77.350	ENSPMEG00000008929	-	54	77.237	Poecilia_mexicana
ENSLACG00000015309	SMARCA4	100	77.036	ENSPREG00000014823	-	53	76.975	Poecilia_reticulata
ENSLACG00000015309	SMARCA4	100	78.136	ENSPREG00000014608	smarca4a	56	78.851	Poecilia_reticulata
ENSLACG00000015309	SMARCA4	100	88.305	ENSPPYG00000009568	SMARCA4	51	88.783	Pongo_abelii
ENSLACG00000015309	SMARCA4	100	88.397	ENSPCOG00000023011	SMARCA4	52	88.902	Propithecus_coquereli
ENSLACG00000015309	SMARCA4	100	73.945	ENSPNYG00000023995	-	51	77.536	Pundamilia_nyererei
ENSLACG00000015309	SMARCA4	100	82.139	ENSPNYG00000000717	smarca4a	53	81.434	Pundamilia_nyererei
ENSLACG00000015309	SMARCA4	100	74.460	ENSPNAG00000024136	smarca4a	50	77.738	Pygocentrus_nattereri
ENSLACG00000015309	SMARCA4	100	79.176	ENSPNAG00000006636	-	53	79.089	Pygocentrus_nattereri
ENSLACG00000015309	SMARCA4	100	88.038	ENSRNOG00000009271	Smarca4	52	88.544	Rattus_norvegicus
ENSLACG00000015309	SMARCA4	100	88.425	ENSRBIG00000038696	SMARCA4	51	88.902	Rhinopithecus_bieti
ENSLACG00000015309	SMARCA4	100	88.425	ENSRROG00000045509	SMARCA4	52	88.902	Rhinopithecus_roxellana
ENSLACG00000015309	SMARCA4	100	88.425	ENSSBOG00000026896	SMARCA4	52	88.902	Saimiri_boliviensis_boliviensis
ENSLACG00000015309	SMARCA4	100	88.743	ENSSHAG00000001642	SMARCA4	52	89.008	Sarcophilus_harrisii
ENSLACG00000015309	SMARCA4	100	82.904	ENSSFOG00015013823	smarca4	52	82.787	Scleropages_formosus
ENSLACG00000015309	SMARCA4	92	84.660	ENSSFOG00015009921	-	52	77.381	Scleropages_formosus
ENSLACG00000015309	SMARCA4	100	76.364	ENSSMAG00000014082	-	53	76.364	Scophthalmus_maximus
ENSLACG00000015309	SMARCA4	100	83.313	ENSSMAG00000003200	smarca4a	50	83.555	Scophthalmus_maximus
ENSLACG00000015309	SMARCA4	100	80.401	ENSSDUG00000005388	-	54	76.854	Seriola_dumerili
ENSLACG00000015309	SMARCA4	100	83.816	ENSSDUG00000017298	smarca4a	52	83.333	Seriola_dumerili
ENSLACG00000015309	SMARCA4	100	80.792	ENSSLDG00000023663	-	52	81.437	Seriola_lalandi_dorsalis
ENSLACG00000015309	SMARCA4	100	81.829	ENSSLDG00000024486	smarca4a	56	79.808	Seriola_lalandi_dorsalis
ENSLACG00000015309	SMARCA4	100	87.846	ENSSPUG00000004558	SMARCA4	52	87.966	Sphenodon_punctatus
ENSLACG00000015309	SMARCA4	100	80.774	ENSSPAG00000004248	smarca4a	52	80.539	Stegastes_partitus
ENSLACG00000015309	SMARCA4	100	76.960	ENSSPAG00000012533	-	53	76.339	Stegastes_partitus
ENSLACG00000015309	SMARCA4	100	88.397	ENSSSCG00000013629	SMARCA4	52	88.902	Sus_scrofa
ENSLACG00000015309	SMARCA4	65	80.812	ENSTGUG00000015488	-	58	91.473	Taeniopygia_guttata
ENSLACG00000015309	SMARCA4	100	75.736	ENSTRUG00000004885	smarca4a	58	75.294	Takifugu_rubripes
ENSLACG00000015309	SMARCA4	100	73.160	ENSTRUG00000001378	SMARCA4	53	74.857	Takifugu_rubripes
ENSLACG00000015309	SMARCA4	100	76.914	ENSTNIG00000004536	SMARCA4	52	77.647	Tetraodon_nigroviridis
ENSLACG00000015309	SMARCA4	100	79.712	ENSTNIG00000004859	-	71	80.072	Tetraodon_nigroviridis
ENSLACG00000015309	SMARCA4	100	88.369	ENSTTRG00000009519	SMARCA4	51	89.089	Tursiops_truncatus
ENSLACG00000015309	SMARCA4	100	88.397	ENSUAMG00000014661	SMARCA4	52	88.902	Ursus_americanus
ENSLACG00000015309	SMARCA4	100	81.107	ENSUMAG00000022005	SMARCA4	52	89.744	Ursus_maritimus
ENSLACG00000015309	SMARCA4	100	88.397	ENSVVUG00000017820	SMARCA4	50	88.902	Vulpes_vulpes
ENSLACG00000015309	SMARCA4	100	83.797	ENSXETG00000009355	smarca4	81	83.433	Xenopus_tropicalis
ENSLACG00000015309	SMARCA4	100	77.415	ENSXCOG00000013494	-	50	77.053	Xiphophorus_couchianus
ENSLACG00000015309	SMARCA4	100	77.536	ENSXMAG00000007030	-	53	76.697	Xiphophorus_maculatus
ENSLACG00000015309	SMARCA4	100	79.466	ENSXMAG00000006321	smarca4a	57	77.262	Xiphophorus_maculatus