EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000015332 (Gene tree)
Gene ID: 102347892
Gene Symbol: ARL5C
Alias: ARL12
Full Name: ADP ribosylation factor like GTPase 5C
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 39699 bases
Position: chrJH127045.1:1231975-1271673
Accession: 102347892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000023035	MMR_HSR1	PF01926.23	7.7e-08	1	1
ENSLACP00000017406	MMR_HSR1	PF01926.23	7.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000025576	ARL5C-202	1762	XM_005998900	ENSLACP00000023035	179 (aa)	XP_005998962	M3XJX9
ENSLACT00000017534	ARL5C-201	1965	-	ENSLACP00000017406	179 (aa)	-	H3B685

Gene Model

Click here to download ENSLACG00000015332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015332's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000015332	ARL5C	54	39.423	ENSLACG00000001971	ARFRP1	87	40.196
ENSLACG00000015332	ARL5C	88	30.435	ENSLACG00000003169	-	83	30.435
ENSLACG00000015332	ARL5C	94	40.000	ENSLACG00000003905	ARL4D	84	40.000
ENSLACG00000015332	ARL5C	88	30.675	ENSLACG00000014881	ARL8A	85	30.675
ENSLACG00000015332	ARL5C	64	30.000	ENSLACG00000011557	zgc:101559	52	30.000
ENSLACG00000015332	ARL5C	99	50.562	ENSLACG00000009882	-	98	50.562
ENSLACG00000015332	ARL5C	98	38.122	ENSLACG00000016480	-	97	38.122
ENSLACG00000015332	ARL5C	96	41.279	ENSLACG00000001595	ARL3	95	41.279
ENSLACG00000015332	ARL5C	99	50.000	ENSLACG00000019009	-	98	50.000
ENSLACG00000015332	ARL5C	90	83.851	ENSLACG00000015068	ARL5B	88	83.851
ENSLACG00000015332	ARL5C	85	46.835	ENSLACG00000002695	ARL4A	76	46.835
ENSLACG00000015332	ARL5C	99	39.888	ENSLACG00000010889	-	94	39.888
ENSLACG00000015332	ARL5C	64	30.252	ENSLACG00000014446	RAB2B	72	30.252
ENSLACG00000015332	ARL5C	82	44.898	ENSLACG00000012168	-	94	44.898
ENSLACG00000015332	ARL5C	90	39.053	ENSLACG00000003946	arl2	88	39.053
ENSLACG00000015332	ARL5C	99	50.279	ENSLACG00000017926	ARF1	99	50.279
ENSLACG00000015332	ARL5C	97	48.000	ENSLACG00000015381	ARF4	95	48.000
ENSLACG00000015332	ARL5C	99	51.124	ENSLACG00000019010	-	98	51.124
ENSLACG00000015332	ARL5C	97	39.080	ENSLACG00000011405	ARL11	90	39.080
ENSLACG00000015332	ARL5C	76	37.226	ENSLACG00000014817	ARL10	56	37.226
ENSLACG00000015332	ARL5C	97	39.429	ENSLACG00000016598	arl3l1	88	39.429
ENSLACG00000015332	ARL5C	93	44.571	ENSLACG00000015350	ARL4C	85	44.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000015332	ARL5C	100	75.978	ENSAMEG00000004195	ARL5C	99	75.978	Ailuropoda_melanoleuca
ENSLACG00000015332	ARL5C	99	84.270	ENSACAG00000003879	-	99	84.270	Anolis_carolinensis
ENSLACG00000015332	ARL5C	100	81.564	ENSCAFG00000016525	ARL5C	100	81.564	Canis_familiaris
ENSLACG00000015332	ARL5C	99	78.090	ENSCHIG00000008208	ARL5C	99	78.090	Capra_hircus
ENSLACG00000015332	ARL5C	59	77.358	ENSCHOG00000013232	-	100	77.358	Choloepus_hoffmanni
ENSLACG00000015332	ARL5C	98	73.143	ENSCGRG00001000695	Arl5c	98	73.143	Cricetulus_griseus_chok1gshd
ENSLACG00000015332	ARL5C	98	73.714	ENSCGRG00000007376	Arl5c	98	73.714	Cricetulus_griseus_crigri
ENSLACG00000015332	ARL5C	100	79.330	ENSDNOG00000019741	ARL5C	100	79.330	Dasypus_novemcinctus
ENSLACG00000015332	ARL5C	99	78.090	ENSDORG00000016304	Arl5c	99	78.090	Dipodomys_ordii
ENSLACG00000015332	ARL5C	92	81.098	ENSEASG00005001922	ARL5C	77	80.606	Equus_asinus_asinus
ENSLACG00000015332	ARL5C	100	79.330	ENSECAG00000009024	ARL5C	100	79.330	Equus_caballus
ENSLACG00000015332	ARL5C	100	80.447	ENSFCAG00000009962	ARL5C	100	80.447	Felis_catus
ENSLACG00000015332	ARL5C	99	80.337	ENSSTOG00000011104	ARL5C	99	80.337	Ictidomys_tridecemlineatus
ENSLACG00000015332	ARL5C	100	80.447	ENSLAFG00000018248	ARL5C	99	80.447	Loxodonta_africana
ENSLACG00000015332	ARL5C	96	70.930	ENSMAUG00000012845	Arl5c	85	70.930	Mesocricetus_auratus
ENSLACG00000015332	ARL5C	100	78.212	ENSMICG00000002661	ARL5C	100	78.212	Microcebus_murinus
ENSLACG00000015332	ARL5C	100	70.950	ENSMOCG00000000234	Arl5c	100	70.950	Microtus_ochrogaster
ENSLACG00000015332	ARL5C	100	78.212	MGP_CAROLIEiJ_G0017071	Arl5c	100	78.212	Mus_caroli
ENSLACG00000015332	ARL5C	100	78.771	ENSMUSG00000038352	Arl5c	100	78.771	Mus_musculus
ENSLACG00000015332	ARL5C	100	77.654	MGP_PahariEiJ_G0018200	Arl5c	100	77.654	Mus_pahari
ENSLACG00000015332	ARL5C	100	78.212	MGP_SPRETEiJ_G0017917	Arl5c	100	78.212	Mus_spretus
ENSLACG00000015332	ARL5C	100	77.654	ENSMLUG00000030149	ARL5C	99	77.654	Myotis_lucifugus
ENSLACG00000015332	ARL5C	100	79.888	ENSOGAG00000005894	ARL5C	100	79.888	Otolemur_garnettii
ENSLACG00000015332	ARL5C	100	78.212	ENSOARG00000010377	ARL5C	99	78.212	Ovis_aries
ENSLACG00000015332	ARL5C	100	80.447	ENSPPRG00000000975	ARL5C	100	80.447	Panthera_pardus
ENSLACG00000015332	ARL5C	100	79.888	ENSPTIG00000017487	ARL5C	100	79.888	Panthera_tigris_altaica
ENSLACG00000015332	ARL5C	98	79.429	ENSPEMG00000008932	Arl5c	98	79.429	Peromyscus_maniculatus_bairdii
ENSLACG00000015332	ARL5C	100	78.771	ENSPCOG00000028489	ARL5C	100	78.771	Propithecus_coquereli
ENSLACG00000015332	ARL5C	94	77.976	ENSPVAG00000008495	ARL5C	99	77.976	Pteropus_vampyrus
ENSLACG00000015332	ARL5C	100	76.536	ENSRNOG00000036880	Arl5c	100	76.536	Rattus_norvegicus
ENSLACG00000015332	ARL5C	96	68.023	ENSSBOG00000021022	ARL5C	98	68.023	Saimiri_boliviensis_boliviensis
ENSLACG00000015332	ARL5C	96	84.211	ENSSPUG00000007555	ARL5C	100	86.503	Sphenodon_punctatus
ENSLACG00000015332	ARL5C	100	76.536	ENSTBEG00000007274	ARL5C	100	76.536	Tupaia_belangeri
ENSLACG00000015332	ARL5C	100	79.888	ENSUAMG00000012299	ARL5C	100	79.888	Ursus_americanus
ENSLACG00000015332	ARL5C	100	79.888	ENSUMAG00000017197	ARL5C	100	79.888	Ursus_maritimus
ENSLACG00000015332	ARL5C	100	79.330	ENSXETG00000023713	arl5c	92	79.330	Xenopus_tropicalis