EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Description

Ensembl ID: ENSLACG00000015342 (Gene tree)
Gene ID: 102353631
Gene Symbol: eef1a1l1
Alias: fi48f03|wu:fi48f03|zgc:109885
Full Name: elongation factor 1-alpha%2C oocyte form
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 8511 bases
Position: chrJH126748.1:1234571-1243081
Accession: 102353631
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000017417	GTP_EFTU	PF00009.27	1.6e-52	1	1
ENSLACP00000017417	GTP_EFTU_D2	PF03144.25	8.5e-15	1	1
ENSLACP00000017417	GTP_EFTU_D3	PF03143.17	5.7e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000017545	-	1416	XM_005993906	ENSLACP00000017417	472 (aa)	XP_005993968	H3B696

Gene Model

Click here to download ENSLACG00000015342's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015342's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000015342	eef1a1l1	95	73.556	ENSLACG00000003948	si:dkey-37o8.1	98	73.556
ENSLACG00000015342	eef1a1l1	82	41.753	ENSLACG00000004528	HBS1L	76	41.753
ENSLACG00000015342	eef1a1l1	97	86.681	ENSLACG00000002952	-	99	86.681
ENSLACG00000015342	eef1a1l1	92	30.822	ENSLACG00000001700	GSPT1	81	30.805
ENSLACG00000015342	eef1a1l1	97	71.336	ENSLACG00000004296	EEF1A2	97	71.336
ENSLACG00000015342	eef1a1l1	86	91.832	ENSLACG00000015392	-	100	91.525