EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Description

Ensembl ID: ENSLACG00000015392 (Gene tree)
Gene ID: 102360389
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha 2-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 7786 bases
Position: chrJH126748.1:1249212-1256997
Accession: 102360389
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000017479	GTP_EFTU	PF00009.27	1.2e-36	1	1
ENSLACP00000017479	GTP_EFTU_D2	PF03144.25	3.2e-14	1	1
ENSLACP00000017479	GTP_EFTU_D3	PF03143.17	2.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000017607	-	2506	XM_005993935	ENSLACP00000017479	413 (aa)	-	H3B6F8

Gene Model

Click here to download ENSLACG00000015392's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015392's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000015392	-	100	91.525	ENSLACG00000015342	eef1a1l1	86	91.832
ENSLACG00000015392	-	83	39.942	ENSLACG00000004528	HBS1L	68	39.942
ENSLACG00000015392	-	99	86.341	ENSLACG00000002952	-	88	86.173
ENSLACG00000015392	-	99	69.048	ENSLACG00000004296	EEF1A2	85	69.458
ENSLACG00000015392	-	100	70.944	ENSLACG00000003948	si:dkey-37o8.1	87	71.642