EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000015479 (Gene tree)
Gene ID: 102365885
Gene Symbol: si:ch1073-100f3.2
Alias: -
Full Name: solute carrier family 25 member 10
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 37354 bases
Position: chrJH126596.1:1267669-1305022
Accession: 102365627
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000017573	Ribosomal_L12	PF00542.19	1.9e-20	1	1
ENSLACP00000017572	Ribosomal_L12	PF00542.19	1.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000024953	-	3023	XM_005989074	ENSLACP00000023128	286 (aa)	XP_005989136	M3XK72
ENSLACT00000017703	-	2666	XM_005989075	ENSLACP00000017573	197 (aa)	XP_005989137	H3B6Q2
ENSLACT00000017702	-	1323	-	ENSLACP00000017572	440 (aa)	-	H3B6Q1

Gene Model

Click here to download ENSLACG00000015479's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015479's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000015479	si:ch1073-100f3.2	99	72.336	ENSAMEG00000017519	-	99	71.882	Ailuropoda_melanoleuca
ENSLACG00000015479	si:ch1073-100f3.2	99	73.684	ENSCAFG00000005812	-	99	73.684	Canis_familiaris
ENSLACG00000015479	si:ch1073-100f3.2	99	73.016	ENSCAFG00020009743	-	99	73.016	Canis_lupus_dingo
ENSLACG00000015479	si:ch1073-100f3.2	99	72.624	ENSFCAG00000012935	-	99	72.851	Felis_catus
ENSLACG00000015479	si:ch1073-100f3.2	74	78.395	ENSFALG00000012075	-	95	78.395	Ficedula_albicollis
ENSLACG00000015479	si:ch1073-100f3.2	99	73.973	ENSMMUG00000004457	SLC25A10	99	73.684	Macaca_mulatta
ENSLACG00000015479	si:ch1073-100f3.2	94	73.621	ENSONIG00000001991	si:ch1073-100f3.2	93	73.621	Oreochromis_niloticus
ENSLACG00000015479	si:ch1073-100f3.2	93	74.209	ENSSHAG00000012052	-	93	73.850	Sarcophilus_harrisii
ENSLACG00000015479	si:ch1073-100f3.2	92	78.624	ENSXETG00000019705	slc25a10	99	78.624	Xenopus_tropicalis