EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000015530 (Gene tree)
Gene ID: 102354218
Gene Symbol: EXOSC2
Alias: RRP4|Rrp4p|hRrp4p|p7
Full Name: exosome component 2
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 22927 bases
Position: chrJH126633.1:1282995-1305921
Accession: 102354218
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000017633	ECR1_N	PF14382.6	1.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000017763	EXOSC2-201	2419	XM_005990625	ENSLACP00000017633	293 (aa)	XP_005990687	H3B6W2

Gene Model

Click here to download ENSLACG00000015530's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015530's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000015530	EXOSC2	100	83.673	ENSG00000130713	EXOSC2	100	83.673	Homo_sapiens
ENSLACG00000015530	EXOSC2	90	81.887	ENSAPOG00000008861	exosc2	97	81.887	Acanthochromis_polyacanthus
ENSLACG00000015530	EXOSC2	100	82.993	ENSAMEG00000016239	EXOSC2	100	82.993	Ailuropoda_melanoleuca
ENSLACG00000015530	EXOSC2	100	80.272	ENSACIG00000019054	exosc2	100	80.272	Amphilophus_citrinellus
ENSLACG00000015530	EXOSC2	100	81.293	ENSAOCG00000008577	exosc2	100	81.293	Amphiprion_ocellaris
ENSLACG00000015530	EXOSC2	100	81.293	ENSAOCG00000004983	exosc2	100	81.293	Amphiprion_ocellaris
ENSLACG00000015530	EXOSC2	100	81.293	ENSAPEG00000014088	exosc2	100	81.293	Amphiprion_percula
ENSLACG00000015530	EXOSC2	100	80.952	ENSATEG00000018680	exosc2	100	80.952	Anabas_testudineus
ENSLACG00000015530	EXOSC2	92	86.813	ENSAPLG00000012516	EXOSC2	94	86.813	Anas_platyrhynchos
ENSLACG00000015530	EXOSC2	99	82.253	ENSACAG00000002706	EXOSC2	99	82.253	Anolis_carolinensis
ENSLACG00000015530	EXOSC2	100	80.272	ENSACLG00000013613	exosc2	100	80.272	Astatotilapia_calliptera
ENSLACG00000015530	EXOSC2	100	82.712	ENSAMXG00000042605	exosc2	100	82.712	Astyanax_mexicanus
ENSLACG00000015530	EXOSC2	100	84.014	ENSBTAG00000048071	EXOSC2	100	84.014	Bos_taurus
ENSLACG00000015530	EXOSC2	90	42.537	WBGene00022232	exos-2	88	42.537	Caenorhabditis_elegans
ENSLACG00000015530	EXOSC2	100	83.333	ENSCJAG00000020537	EXOSC2	100	83.333	Callithrix_jacchus
ENSLACG00000015530	EXOSC2	99	81.911	ENSCAFG00000019941	EXOSC2	99	81.911	Canis_familiaris
ENSLACG00000015530	EXOSC2	100	81.973	ENSCAFG00020024047	EXOSC2	100	81.973	Canis_lupus_dingo
ENSLACG00000015530	EXOSC2	100	83.673	ENSCHIG00000021398	EXOSC2	100	83.673	Capra_hircus
ENSLACG00000015530	EXOSC2	100	83.333	ENSTSYG00000001805	EXOSC2	100	83.333	Carlito_syrichta
ENSLACG00000015530	EXOSC2	100	77.441	ENSCPOG00000005902	EXOSC2	100	77.441	Cavia_porcellus
ENSLACG00000015530	EXOSC2	100	83.333	ENSCCAG00000019749	EXOSC2	100	83.333	Cebus_capucinus
ENSLACG00000015530	EXOSC2	100	83.333	ENSCATG00000025389	-	100	83.333	Cercocebus_atys
ENSLACG00000015530	EXOSC2	100	81.973	ENSCLAG00000006195	EXOSC2	100	81.973	Chinchilla_lanigera
ENSLACG00000015530	EXOSC2	100	83.333	ENSCSAG00000014760	EXOSC2	100	83.333	Chlorocebus_sabaeus
ENSLACG00000015530	EXOSC2	100	82.993	ENSCHOG00000000858	EXOSC2	100	82.993	Choloepus_hoffmanni
ENSLACG00000015530	EXOSC2	99	83.276	ENSCPBG00000022626	EXOSC2	99	83.276	Chrysemys_picta_bellii
ENSLACG00000015530	EXOSC2	96	64.583	ENSCING00000014934	-	94	64.583	Ciona_intestinalis
ENSLACG00000015530	EXOSC2	92	64.621	ENSCSAVG00000003684	-	100	64.621	Ciona_savignyi
ENSLACG00000015530	EXOSC2	100	83.333	ENSCANG00000039828	-	100	83.333	Colobus_angolensis_palliatus
ENSLACG00000015530	EXOSC2	99	76.109	ENSCANG00000029298	-	99	76.109	Colobus_angolensis_palliatus
ENSLACG00000015530	EXOSC2	100	83.673	ENSCGRG00001013981	Exosc2	100	83.673	Cricetulus_griseus_chok1gshd
ENSLACG00000015530	EXOSC2	100	83.673	ENSCGRG00000017629	Exosc2	100	83.673	Cricetulus_griseus_crigri
ENSLACG00000015530	EXOSC2	100	78.571	ENSCSEG00000016539	exosc2	100	78.571	Cynoglossus_semilaevis
ENSLACG00000015530	EXOSC2	100	79.932	ENSCVAG00000022260	exosc2	100	79.932	Cyprinodon_variegatus
ENSLACG00000015530	EXOSC2	100	78.305	ENSDARG00000028688	exosc2	100	78.305	Danio_rerio
ENSLACG00000015530	EXOSC2	91	82.836	ENSDNOG00000025767	-	100	82.836	Dasypus_novemcinctus
ENSLACG00000015530	EXOSC2	100	82.313	ENSDORG00000009238	Exosc2	100	82.313	Dipodomys_ordii
ENSLACG00000015530	EXOSC2	92	62.271	FBgn0034879	Rrp4	92	62.637	Drosophila_melanogaster
ENSLACG00000015530	EXOSC2	93	69.231	ENSETEG00000016130	-	99	69.231	Echinops_telfairi
ENSLACG00000015530	EXOSC2	100	83.673	ENSEASG00005008475	EXOSC2	86	83.673	Equus_asinus_asinus
ENSLACG00000015530	EXOSC2	100	83.673	ENSECAG00000007897	EXOSC2	86	83.673	Equus_caballus
ENSLACG00000015530	EXOSC2	100	80.000	ENSELUG00000013641	exosc2	100	80.000	Esox_lucius
ENSLACG00000015530	EXOSC2	100	82.653	ENSFCAG00000025936	EXOSC2	100	82.653	Felis_catus
ENSLACG00000015530	EXOSC2	99	80.205	ENSFALG00000001446	EXOSC2	99	80.205	Ficedula_albicollis
ENSLACG00000015530	EXOSC2	100	81.293	ENSFDAG00000017196	EXOSC2	100	81.293	Fukomys_damarensis
ENSLACG00000015530	EXOSC2	100	80.272	ENSFHEG00000018571	exosc2	100	80.272	Fundulus_heteroclitus
ENSLACG00000015530	EXOSC2	100	76.871	ENSGMOG00000011785	exosc2	99	76.871	Gadus_morhua
ENSLACG00000015530	EXOSC2	99	82.253	ENSGALG00000040373	EXOSC2	99	82.253	Gallus_gallus
ENSLACG00000015530	EXOSC2	99	79.863	ENSGAFG00000010283	exosc2	99	79.863	Gambusia_affinis
ENSLACG00000015530	EXOSC2	100	79.252	ENSGACG00000016805	exosc2	99	80.240	Gasterosteus_aculeatus
ENSLACG00000015530	EXOSC2	87	85.490	ENSGAGG00000021026	EXOSC2	96	85.490	Gopherus_agassizii
ENSLACG00000015530	EXOSC2	100	82.993	ENSGGOG00000010578	EXOSC2	100	82.993	Gorilla_gorilla
ENSLACG00000015530	EXOSC2	100	80.952	ENSHBUG00000022437	exosc2	100	80.952	Haplochromis_burtoni
ENSLACG00000015530	EXOSC2	100	81.973	ENSHGLG00000012834	EXOSC2	100	81.973	Heterocephalus_glaber_female
ENSLACG00000015530	EXOSC2	100	81.973	ENSHGLG00100007092	EXOSC2	100	81.973	Heterocephalus_glaber_male
ENSLACG00000015530	EXOSC2	100	77.551	ENSHCOG00000019130	exosc2	100	77.551	Hippocampus_comes
ENSLACG00000015530	EXOSC2	100	79.932	ENSIPUG00000015397	exosc2	100	79.932	Ictalurus_punctatus
ENSLACG00000015530	EXOSC2	100	82.313	ENSSTOG00000005999	EXOSC2	100	82.313	Ictidomys_tridecemlineatus
ENSLACG00000015530	EXOSC2	100	82.313	ENSJJAG00000003188	Exosc2	100	82.313	Jaculus_jaculus
ENSLACG00000015530	EXOSC2	99	79.522	ENSKMAG00000017397	exosc2	99	79.522	Kryptolebias_marmoratus
ENSLACG00000015530	EXOSC2	100	78.231	ENSLBEG00000019269	exosc2	100	78.231	Labrus_bergylta
ENSLACG00000015530	EXOSC2	100	84.068	ENSLAFG00000006984	EXOSC2	100	84.068	Loxodonta_africana
ENSLACG00000015530	EXOSC2	100	83.333	ENSMFAG00000000597	-	100	83.333	Macaca_fascicularis
ENSLACG00000015530	EXOSC2	100	70.408	ENSMFAG00000034160	-	84	70.408	Macaca_fascicularis
ENSLACG00000015530	EXOSC2	100	80.272	ENSMMUG00000012498	EXOSC2	100	80.272	Macaca_mulatta
ENSLACG00000015530	EXOSC2	100	71.429	ENSMNEG00000028704	-	91	71.429	Macaca_nemestrina
ENSLACG00000015530	EXOSC2	100	83.333	ENSMNEG00000031861	-	100	83.333	Macaca_nemestrina
ENSLACG00000015530	EXOSC2	100	83.333	ENSMLEG00000042587	-	100	83.333	Mandrillus_leucophaeus
ENSLACG00000015530	EXOSC2	100	71.429	ENSMLEG00000029891	-	91	71.429	Mandrillus_leucophaeus
ENSLACG00000015530	EXOSC2	100	80.272	ENSMAMG00000012466	exosc2	100	80.272	Mastacembelus_armatus
ENSLACG00000015530	EXOSC2	100	79.592	ENSMZEG00005018737	exosc2	100	79.592	Maylandia_zebra
ENSLACG00000015530	EXOSC2	99	82.594	ENSMGAG00000005450	EXOSC2	99	82.594	Meleagris_gallopavo
ENSLACG00000015530	EXOSC2	100	83.333	ENSMAUG00000008299	Exosc2	100	83.333	Mesocricetus_auratus
ENSLACG00000015530	EXOSC2	100	84.014	ENSMICG00000015495	EXOSC2	100	84.014	Microcebus_murinus
ENSLACG00000015530	EXOSC2	100	83.333	ENSMOCG00000008262	Exosc2	100	83.333	Microtus_ochrogaster
ENSLACG00000015530	EXOSC2	100	80.952	ENSMMOG00000009616	exosc2	100	80.952	Mola_mola
ENSLACG00000015530	EXOSC2	100	85.034	ENSMODG00000012114	EXOSC2	100	85.034	Monodelphis_domestica
ENSLACG00000015530	EXOSC2	100	80.272	ENSMALG00000022132	exosc2	100	80.272	Monopterus_albus
ENSLACG00000015530	EXOSC2	100	82.653	MGP_CAROLIEiJ_G0023415	Exosc2	100	82.653	Mus_caroli
ENSLACG00000015530	EXOSC2	100	82.653	ENSMUSG00000039356	Exosc2	100	82.653	Mus_musculus
ENSLACG00000015530	EXOSC2	100	82.993	MGP_PahariEiJ_G0024872	Exosc2	100	82.993	Mus_pahari
ENSLACG00000015530	EXOSC2	100	82.653	MGP_SPRETEiJ_G0024332	Exosc2	100	82.653	Mus_spretus
ENSLACG00000015530	EXOSC2	100	82.313	ENSMPUG00000012686	EXOSC2	100	82.313	Mustela_putorius_furo
ENSLACG00000015530	EXOSC2	100	83.446	ENSMLUG00000008776	EXOSC2	100	83.446	Myotis_lucifugus
ENSLACG00000015530	EXOSC2	100	82.313	ENSNGAG00000019383	Exosc2	100	82.313	Nannospalax_galili
ENSLACG00000015530	EXOSC2	100	80.612	ENSNBRG00000005453	exosc2	100	80.612	Neolamprologus_brichardi
ENSLACG00000015530	EXOSC2	100	83.673	ENSNLEG00000012533	EXOSC2	100	83.673	Nomascus_leucogenys
ENSLACG00000015530	EXOSC2	100	65.646	ENSMEUG00000000795	EXOSC2	100	65.646	Notamacropus_eugenii
ENSLACG00000015530	EXOSC2	66	92.308	ENSOPRG00000008688	EXOSC2	65	92.308	Ochotona_princeps
ENSLACG00000015530	EXOSC2	100	80.272	ENSODEG00000016880	-	100	80.272	Octodon_degus
ENSLACG00000015530	EXOSC2	86	83.465	ENSODEG00000019513	-	100	83.465	Octodon_degus
ENSLACG00000015530	EXOSC2	100	80.612	ENSONIG00000014086	exosc2	100	80.612	Oreochromis_niloticus
ENSLACG00000015530	EXOSC2	100	81.633	ENSOANG00000001044	EXOSC2	100	81.633	Ornithorhynchus_anatinus
ENSLACG00000015530	EXOSC2	100	82.993	ENSOCUG00000007138	EXOSC2	100	82.993	Oryctolagus_cuniculus
ENSLACG00000015530	EXOSC2	100	79.252	ENSORLG00000007443	exosc2	100	79.252	Oryzias_latipes
ENSLACG00000015530	EXOSC2	100	79.252	ENSORLG00020018902	exosc2	100	79.252	Oryzias_latipes_hni
ENSLACG00000015530	EXOSC2	100	79.592	ENSORLG00015006767	exosc2	100	79.592	Oryzias_latipes_hsok
ENSLACG00000015530	EXOSC2	100	78.912	ENSOMEG00000003533	exosc2	100	78.912	Oryzias_melastigma
ENSLACG00000015530	EXOSC2	100	84.694	ENSOGAG00000007558	EXOSC2	100	84.694	Otolemur_garnettii
ENSLACG00000015530	EXOSC2	100	83.446	ENSOARG00000007438	EXOSC2	100	83.446	Ovis_aries
ENSLACG00000015530	EXOSC2	100	83.673	ENSPPAG00000034796	EXOSC2	100	83.673	Pan_paniscus
ENSLACG00000015530	EXOSC2	100	82.313	ENSPPRG00000001089	EXOSC2	100	82.313	Panthera_pardus
ENSLACG00000015530	EXOSC2	100	82.313	ENSPTIG00000021163	EXOSC2	100	82.313	Panthera_tigris_altaica
ENSLACG00000015530	EXOSC2	100	83.673	ENSPTRG00000021476	EXOSC2	100	83.673	Pan_troglodytes
ENSLACG00000015530	EXOSC2	100	83.673	ENSPTRG00000045766	-	100	83.673	Pan_troglodytes
ENSLACG00000015530	EXOSC2	100	83.333	ENSPANG00000025966	EXOSC2	100	83.333	Papio_anubis
ENSLACG00000015530	EXOSC2	99	78.966	ENSPKIG00000004271	exosc2	98	78.966	Paramormyrops_kingsleyae
ENSLACG00000015530	EXOSC2	99	83.959	ENSPSIG00000006743	EXOSC2	99	83.959	Pelodiscus_sinensis
ENSLACG00000015530	EXOSC2	86	81.028	ENSPMGG00000010980	exosc2	99	81.028	Periophthalmus_magnuspinnatus
ENSLACG00000015530	EXOSC2	100	83.333	ENSPEMG00000006345	Exosc2	100	83.333	Peromyscus_maniculatus_bairdii
ENSLACG00000015530	EXOSC2	100	78.644	ENSPMAG00000001280	exosc2	100	78.644	Petromyzon_marinus
ENSLACG00000015530	EXOSC2	100	85.034	ENSPCIG00000024122	EXOSC2	97	85.034	Phascolarctos_cinereus
ENSLACG00000015530	EXOSC2	99	79.592	ENSPFOG00000019819	exosc2	99	79.592	Poecilia_formosa
ENSLACG00000015530	EXOSC2	99	79.863	ENSPLAG00000004605	exosc2	99	79.863	Poecilia_latipinna
ENSLACG00000015530	EXOSC2	99	79.863	ENSPMEG00000010976	exosc2	99	79.863	Poecilia_mexicana
ENSLACG00000015530	EXOSC2	99	79.522	ENSPREG00000014306	exosc2	99	79.522	Poecilia_reticulata
ENSLACG00000015530	EXOSC2	100	83.673	ENSPPYG00000019695	EXOSC2	100	83.673	Pongo_abelii
ENSLACG00000015530	EXOSC2	100	84.694	ENSPCAG00000013400	EXOSC2	100	84.694	Procavia_capensis
ENSLACG00000015530	EXOSC2	100	84.354	ENSPCOG00000017639	EXOSC2	100	84.354	Propithecus_coquereli
ENSLACG00000015530	EXOSC2	100	82.653	ENSPVAG00000001513	EXOSC2	100	82.653	Pteropus_vampyrus
ENSLACG00000015530	EXOSC2	100	80.952	ENSPNYG00000007383	exosc2	100	80.952	Pundamilia_nyererei
ENSLACG00000015530	EXOSC2	100	83.333	ENSPNAG00000014281	exosc2	100	83.333	Pygocentrus_nattereri
ENSLACG00000015530	EXOSC2	100	82.993	ENSRNOG00000009245	Exosc2	100	82.993	Rattus_norvegicus
ENSLACG00000015530	EXOSC2	100	82.993	ENSRBIG00000031203	-	100	82.993	Rhinopithecus_bieti
ENSLACG00000015530	EXOSC2	99	76.451	ENSRBIG00000029791	-	99	76.451	Rhinopithecus_bieti
ENSLACG00000015530	EXOSC2	99	75.427	ENSRROG00000043609	-	99	75.427	Rhinopithecus_roxellana
ENSLACG00000015530	EXOSC2	100	82.993	ENSRROG00000010827	-	100	82.993	Rhinopithecus_roxellana
ENSLACG00000015530	EXOSC2	90	42.193	YHR069C	-	84	42.193	Saccharomyces_cerevisiae
ENSLACG00000015530	EXOSC2	100	82.993	ENSSBOG00000022712	EXOSC2	100	82.993	Saimiri_boliviensis_boliviensis
ENSLACG00000015530	EXOSC2	100	85.374	ENSSHAG00000016050	EXOSC2	100	85.374	Sarcophilus_harrisii
ENSLACG00000015530	EXOSC2	100	79.932	ENSSFOG00015011245	exosc2	100	79.932	Scleropages_formosus
ENSLACG00000015530	EXOSC2	100	80.272	ENSSMAG00000003112	exosc2	100	80.272	Scophthalmus_maximus
ENSLACG00000015530	EXOSC2	100	79.125	ENSSDUG00000004634	exosc2	100	79.125	Seriola_dumerili
ENSLACG00000015530	EXOSC2	100	79.932	ENSSLDG00000010616	exosc2	100	79.932	Seriola_lalandi_dorsalis
ENSLACG00000015530	EXOSC2	99	84.407	ENSSPUG00000013391	EXOSC2	99	84.407	Sphenodon_punctatus
ENSLACG00000015530	EXOSC2	100	80.952	ENSSPAG00000022947	exosc2	100	80.952	Stegastes_partitus
ENSLACG00000015530	EXOSC2	100	84.014	ENSSSCG00000005704	EXOSC2	100	84.014	Sus_scrofa
ENSLACG00000015530	EXOSC2	99	79.522	ENSTGUG00000004697	EXOSC2	99	79.522	Taeniopygia_guttata
ENSLACG00000015530	EXOSC2	100	75.768	ENSTRUG00000022436	exosc2	100	75.768	Takifugu_rubripes
ENSLACG00000015530	EXOSC2	100	77.816	ENSTTRG00000015159	EXOSC2	100	77.816	Tursiops_truncatus
ENSLACG00000015530	EXOSC2	95	79.856	ENSUAMG00000009651	EXOSC2	99	79.856	Ursus_americanus
ENSLACG00000015530	EXOSC2	100	82.993	ENSUMAG00000018726	EXOSC2	100	82.993	Ursus_maritimus
ENSLACG00000015530	EXOSC2	100	81.973	ENSVVUG00000027665	EXOSC2	100	81.973	Vulpes_vulpes
ENSLACG00000015530	EXOSC2	100	82.993	ENSXETG00000001340	exosc2	100	82.993	Xenopus_tropicalis
ENSLACG00000015530	EXOSC2	99	79.863	ENSXMAG00000005265	exosc2	99	79.863	Xiphophorus_maculatus