EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000015551 (Gene tree)
Gene ID: 102362140
Gene Symbol: DDX56
Alias: NOH61
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 68883 bases
Position: chrJH126904.1:1288275-1357157
Accession: 102362140
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000017654	ResIII	PF04851.15	1.3e-07	1	1
ENSLACP00000017654	DEAD	PF00270.29	8.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000017784	DDX56-201	4145	XM_005996906	ENSLACP00000017654	565 (aa)	XP_005996968	H3B6Y3

Gene Model

Click here to download ENSLACG00000015551's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015551's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000015551	DDX56	70	32.995	ENSLACG00000013814	DDX47	78	32.911
ENSLACG00000015551	DDX56	73	30.282	ENSLACG00000008244	DDX49	79	30.166
ENSLACG00000015551	DDX56	70	30.750	ENSLACG00000003242	eif4a1a	87	30.075
ENSLACG00000015551	DDX56	71	30.521	ENSLACG00000017153	DDX6	74	30.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000015551	DDX56	97	66.969	ENSG00000136271	DDX56	96	71.348	Homo_sapiens
ENSLACG00000015551	DDX56	97	73.429	ENSAPOG00000017113	ddx56	98	73.333	Acanthochromis_polyacanthus
ENSLACG00000015551	DDX56	97	65.699	ENSAMEG00000017711	DDX56	97	66.114	Ailuropoda_melanoleuca
ENSLACG00000015551	DDX56	93	64.962	ENSACIG00000013747	ddx56	96	75.141	Amphilophus_citrinellus
ENSLACG00000015551	DDX56	85	75.983	ENSAOCG00000015447	-	87	74.896	Amphiprion_ocellaris
ENSLACG00000015551	DDX56	87	76.210	ENSAOCG00000018059	ddx56	93	75.152	Amphiprion_ocellaris
ENSLACG00000015551	DDX56	97	72.973	ENSAPEG00000007267	ddx56	99	71.971	Amphiprion_percula
ENSLACG00000015551	DDX56	95	73.394	ENSATEG00000005279	ddx56	97	72.610	Anabas_testudineus
ENSLACG00000015551	DDX56	97	71.223	ENSACLG00000020113	ddx56	99	71.171	Astatotilapia_calliptera
ENSLACG00000015551	DDX56	96	69.189	ENSAMXG00000019357	ddx56	99	68.953	Astyanax_mexicanus
ENSLACG00000015551	DDX56	97	66.787	ENSBTAG00000010602	DDX56	98	66.606	Bos_taurus
ENSLACG00000015551	DDX56	95	41.697	WBGene00016073	C24H12.4	86	41.155	Caenorhabditis_elegans
ENSLACG00000015551	DDX56	97	66.606	ENSCJAG00000012233	DDX56	97	66.114	Callithrix_jacchus
ENSLACG00000015551	DDX56	79	63.474	ENSCAFG00000029295	DDX56	98	63.920	Canis_familiaris
ENSLACG00000015551	DDX56	97	63.884	ENSCAFG00020019695	DDX56	97	64.088	Canis_lupus_dingo
ENSLACG00000015551	DDX56	97	67.029	ENSCHIG00000014261	DDX56	97	66.667	Capra_hircus
ENSLACG00000015551	DDX56	97	66.425	ENSTSYG00000008048	DDX56	97	66.667	Carlito_syrichta
ENSLACG00000015551	DDX56	84	68.076	ENSCAPG00000006286	DDX56	98	67.230	Cavia_aperea
ENSLACG00000015551	DDX56	97	68.603	ENSCPOG00000003359	DDX56	98	68.073	Cavia_porcellus
ENSLACG00000015551	DDX56	97	65.699	ENSCCAG00000025303	DDX56	97	65.562	Cebus_capucinus
ENSLACG00000015551	DDX56	97	66.606	ENSCATG00000039389	DDX56	97	66.298	Cercocebus_atys
ENSLACG00000015551	DDX56	97	67.760	ENSCLAG00000007666	DDX56	97	67.403	Chinchilla_lanigera
ENSLACG00000015551	DDX56	97	66.788	ENSCSAG00000015636	DDX56	97	66.483	Chlorocebus_sabaeus
ENSLACG00000015551	DDX56	95	73.420	ENSCPBG00000024556	DDX56	97	72.878	Chrysemys_picta_bellii
ENSLACG00000015551	DDX56	89	60.470	ENSCING00000005185	-	98	60.672	Ciona_intestinalis
ENSLACG00000015551	DDX56	88	60.636	ENSCSAVG00000011266	-	98	60.161	Ciona_savignyi
ENSLACG00000015551	DDX56	97	66.667	ENSCANG00000028187	DDX56	97	66.483	Colobus_angolensis_palliatus
ENSLACG00000015551	DDX56	96	68.440	ENSCGRG00001019019	Ddx56	97	67.587	Cricetulus_griseus_chok1gshd
ENSLACG00000015551	DDX56	96	68.440	ENSCGRG00000011870	Ddx56	97	67.587	Cricetulus_griseus_crigri
ENSLACG00000015551	DDX56	97	70.916	ENSCSEG00000008368	ddx56	99	70.324	Cynoglossus_semilaevis
ENSLACG00000015551	DDX56	97	71.712	ENSCVAG00000006499	ddx56	99	71.971	Cyprinodon_variegatus
ENSLACG00000015551	DDX56	98	70.251	ENSDARG00000020913	ddx56	99	70.758	Danio_rerio
ENSLACG00000015551	DDX56	84	64.482	ENSDNOG00000036526	DDX56	97	63.848	Dasypus_novemcinctus
ENSLACG00000015551	DDX56	88	52.778	FBgn0001565	Hlc	89	51.889	Drosophila_melanogaster
ENSLACG00000015551	DDX56	70	58.853	ENSETEG00000002969	-	73	57.644	Echinops_telfairi
ENSLACG00000015551	DDX56	84	46.234	ENSETEG00000019559	-	100	44.235	Echinops_telfairi
ENSLACG00000015551	DDX56	96	63.327	ENSEBUG00000009986	ddx56	99	63.339	Eptatretus_burgeri
ENSLACG00000015551	DDX56	97	67.151	ENSEASG00005017795	DDX56	97	67.219	Equus_asinus_asinus
ENSLACG00000015551	DDX56	97	66.969	ENSECAG00000019897	DDX56	97	67.035	Equus_caballus
ENSLACG00000015551	DDX56	84	67.089	ENSEEUG00000004849	DDX56	98	66.034	Erinaceus_europaeus
ENSLACG00000015551	DDX56	97	72.694	ENSELUG00000004150	ddx56	99	72.464	Esox_lucius
ENSLACG00000015551	DDX56	97	65.942	ENSFCAG00000010261	DDX56	97	66.171	Felis_catus
ENSLACG00000015551	DDX56	97	66.849	ENSFDAG00000007128	DDX56	97	66.851	Fukomys_damarensis
ENSLACG00000015551	DDX56	97	69.746	ENSFHEG00000018008	ddx56	95	76.626	Fundulus_heteroclitus
ENSLACG00000015551	DDX56	97	67.877	ENSGAFG00000006906	ddx56	98	67.818	Gambusia_affinis
ENSLACG00000015551	DDX56	91	75.483	ENSGAGG00000006789	DDX56	92	75.483	Gopherus_agassizii
ENSLACG00000015551	DDX56	97	66.969	ENSGGOG00000012031	DDX56	97	66.667	Gorilla_gorilla
ENSLACG00000015551	DDX56	94	67.910	ENSHBUG00000015246	ddx56	95	68.053	Haplochromis_burtoni
ENSLACG00000015551	DDX56	97	66.606	ENSHGLG00000017271	DDX56	97	66.298	Heterocephalus_glaber_female
ENSLACG00000015551	DDX56	97	66.606	ENSHGLG00100015731	DDX56	97	66.298	Heterocephalus_glaber_male
ENSLACG00000015551	DDX56	97	70.780	ENSHCOG00000001685	ddx56	99	70.364	Hippocampus_comes
ENSLACG00000015551	DDX56	96	70.886	ENSIPUG00000006602	ddx56	97	69.620	Ictalurus_punctatus
ENSLACG00000015551	DDX56	97	66.365	ENSSTOG00000000464	DDX56	98	65.872	Ictidomys_tridecemlineatus
ENSLACG00000015551	DDX56	96	67.219	ENSJJAG00000014269	Ddx56	98	66.483	Jaculus_jaculus
ENSLACG00000015551	DDX56	97	71.942	ENSKMAG00000016611	ddx56	99	70.886	Kryptolebias_marmoratus
ENSLACG00000015551	DDX56	96	71.403	ENSLBEG00000026281	ddx56	98	71.429	Labrus_bergylta
ENSLACG00000015551	DDX56	96	74.864	ENSLOCG00000015185	ddx56	98	74.819	Lepisosteus_oculatus
ENSLACG00000015551	DDX56	96	66.851	ENSLAFG00000018206	DDX56	98	66.114	Loxodonta_africana
ENSLACG00000015551	DDX56	97	66.606	ENSMFAG00000041001	DDX56	97	66.298	Macaca_fascicularis
ENSLACG00000015551	DDX56	97	66.606	ENSMMUG00000002645	DDX56	97	66.298	Macaca_mulatta
ENSLACG00000015551	DDX56	97	66.606	ENSMNEG00000028492	DDX56	97	66.298	Macaca_nemestrina
ENSLACG00000015551	DDX56	97	66.788	ENSMLEG00000043591	DDX56	97	66.483	Mandrillus_leucophaeus
ENSLACG00000015551	DDX56	95	73.529	ENSMAMG00000007776	ddx56	97	73.481	Mastacembelus_armatus
ENSLACG00000015551	DDX56	97	71.223	ENSMZEG00005009813	ddx56	99	71.171	Maylandia_zebra
ENSLACG00000015551	DDX56	97	67.514	ENSMICG00000005550	DDX56	97	67.035	Microcebus_murinus
ENSLACG00000015551	DDX56	96	67.582	ENSMOCG00000016782	Ddx56	97	67.219	Microtus_ochrogaster
ENSLACG00000015551	DDX56	91	73.574	ENSMMOG00000009654	ddx56	99	73.905	Mola_mola
ENSLACG00000015551	DDX56	98	62.186	ENSMODG00000016137	DDX56	98	61.455	Monodelphis_domestica
ENSLACG00000015551	DDX56	65	69.355	ENSMALG00000016910	ddx56	98	69.067	Monopterus_albus
ENSLACG00000015551	DDX56	97	66.365	MGP_CAROLIEiJ_G0016069	Ddx56	98	66.055	Mus_caroli
ENSLACG00000015551	DDX56	97	66.667	ENSMUSG00000004393	Ddx56	97	66.298	Mus_musculus
ENSLACG00000015551	DDX56	97	66.849	MGP_PahariEiJ_G0016822	Ddx56	97	66.483	Mus_pahari
ENSLACG00000015551	DDX56	97	66.667	MGP_SPRETEiJ_G0016911	Ddx56	97	66.298	Mus_spretus
ENSLACG00000015551	DDX56	97	65.699	ENSMPUG00000018196	DDX56	86	65.321	Mustela_putorius_furo
ENSLACG00000015551	DDX56	97	65.108	ENSMLUG00000003509	DDX56	97	65.378	Myotis_lucifugus
ENSLACG00000015551	DDX56	97	67.514	ENSNGAG00000018785	Ddx56	97	67.035	Nannospalax_galili
ENSLACG00000015551	DDX56	93	68.821	ENSNBRG00000002656	ddx56	95	68.762	Neolamprologus_brichardi
ENSLACG00000015551	DDX56	97	67.332	ENSNLEG00000003816	DDX56	97	67.035	Nomascus_leucogenys
ENSLACG00000015551	DDX56	88	63.473	ENSMEUG00000006788	DDX56	99	62.677	Notamacropus_eugenii
ENSLACG00000015551	DDX56	97	65.880	ENSOPRG00000000292	-	97	65.562	Ochotona_princeps
ENSLACG00000015551	DDX56	66	68.783	ENSODEG00000014807	DDX56	98	68.280	Octodon_degus
ENSLACG00000015551	DDX56	98	70.144	ENSONIG00000011509	ddx56	99	70.310	Oreochromis_niloticus
ENSLACG00000015551	DDX56	72	57.213	ENSOANG00000015987	-	93	57.711	Ornithorhynchus_anatinus
ENSLACG00000015551	DDX56	94	57.407	ENSOANG00000006320	-	99	56.985	Ornithorhynchus_anatinus
ENSLACG00000015551	DDX56	97	65.699	ENSOCUG00000022918	DDX56	98	65.872	Oryctolagus_cuniculus
ENSLACG00000015551	DDX56	97	72.022	ENSORLG00000001434	ddx56	99	71.609	Oryzias_latipes
ENSLACG00000015551	DDX56	99	71.708	ENSORLG00020015718	ddx56	96	71.609	Oryzias_latipes_hni
ENSLACG00000015551	DDX56	99	71.658	ENSORLG00015003004	ddx56	95	71.558	Oryzias_latipes_hsok
ENSLACG00000015551	DDX56	97	72.022	ENSOMEG00000022072	ddx56	99	71.609	Oryzias_melastigma
ENSLACG00000015551	DDX56	97	66.302	ENSOGAG00000009981	DDX56	97	66.298	Otolemur_garnettii
ENSLACG00000015551	DDX56	97	67.391	ENSOARG00000015240	DDX56	97	67.035	Ovis_aries
ENSLACG00000015551	DDX56	97	54.446	ENSPPAG00000031263	-	97	54.679	Pan_paniscus
ENSLACG00000015551	DDX56	97	64.286	ENSPPAG00000029147	DDX56	97	63.949	Pan_paniscus
ENSLACG00000015551	DDX56	97	65.761	ENSPPRG00000014594	DDX56	97	66.729	Panthera_pardus
ENSLACG00000015551	DDX56	88	61.952	ENSPTIG00000019500	DDX56	94	62.753	Panthera_tigris_altaica
ENSLACG00000015551	DDX56	91	54.423	ENSPTRG00000052765	-	98	54.808	Pan_troglodytes
ENSLACG00000015551	DDX56	97	66.969	ENSPTRG00000019147	DDX56	97	66.667	Pan_troglodytes
ENSLACG00000015551	DDX56	97	66.788	ENSPANG00000002446	DDX56	97	66.483	Papio_anubis
ENSLACG00000015551	DDX56	97	73.201	ENSPKIG00000018998	ddx56	99	72.383	Paramormyrops_kingsleyae
ENSLACG00000015551	DDX56	94	72.097	ENSPMGG00000017421	ddx56	98	71.483	Periophthalmus_magnuspinnatus
ENSLACG00000015551	DDX56	98	69.009	ENSPCIG00000009336	DDX56	98	68.488	Phascolarctos_cinereus
ENSLACG00000015551	DDX56	97	72.464	ENSPFOG00000018658	ddx56	98	71.869	Poecilia_formosa
ENSLACG00000015551	DDX56	97	72.645	ENSPLAG00000019208	ddx56	98	72.051	Poecilia_latipinna
ENSLACG00000015551	DDX56	97	72.464	ENSPMEG00000001775	ddx56	98	71.869	Poecilia_mexicana
ENSLACG00000015551	DDX56	97	72.101	ENSPREG00000015142	ddx56	98	72.051	Poecilia_reticulata
ENSLACG00000015551	DDX56	97	67.151	ENSPPYG00000017591	DDX56	97	66.851	Pongo_abelii
ENSLACG00000015551	DDX56	93	67.420	ENSPCAG00000011499	DDX56	98	66.541	Procavia_capensis
ENSLACG00000015551	DDX56	97	67.332	ENSPCOG00000024864	DDX56	97	66.851	Propithecus_coquereli
ENSLACG00000015551	DDX56	87	72.093	ENSPVAG00000000791	DDX56	87	73.206	Pteropus_vampyrus
ENSLACG00000015551	DDX56	97	71.043	ENSPNYG00000019212	ddx56	99	70.991	Pundamilia_nyererei
ENSLACG00000015551	DDX56	96	73.007	ENSPNAG00000025446	ddx56	99	73.140	Pygocentrus_nattereri
ENSLACG00000015551	DDX56	97	67.031	ENSRNOG00000004670	Ddx56	97	66.667	Rattus_norvegicus
ENSLACG00000015551	DDX56	97	66.788	ENSRBIG00000030140	DDX56	97	66.483	Rhinopithecus_bieti
ENSLACG00000015551	DDX56	97	66.606	ENSRROG00000044428	DDX56	97	66.298	Rhinopithecus_roxellana
ENSLACG00000015551	DDX56	94	42.979	YLR276C	-	97	43.493	Saccharomyces_cerevisiae
ENSLACG00000015551	DDX56	97	66.425	ENSSBOG00000034339	DDX56	97	66.174	Saimiri_boliviensis_boliviensis
ENSLACG00000015551	DDX56	84	69.895	ENSSHAG00000016615	DDX56	98	68.710	Sarcophilus_harrisii
ENSLACG00000015551	DDX56	96	73.175	ENSSFOG00015012795	ddx56	98	73.126	Scleropages_formosus
ENSLACG00000015551	DDX56	95	72.212	ENSSMAG00000011280	ddx56	99	72.253	Scophthalmus_maximus
ENSLACG00000015551	DDX56	97	72.172	ENSSDUG00000023597	ddx56	99	72.352	Seriola_dumerili
ENSLACG00000015551	DDX56	97	72.352	ENSSLDG00000018369	ddx56	99	72.531	Seriola_lalandi_dorsalis
ENSLACG00000015551	DDX56	74	73.770	ENSSARG00000014363	DDX56	76	71.875	Sorex_araneus
ENSLACG00000015551	DDX56	98	73.788	ENSSPUG00000000784	DDX56	96	73.188	Sphenodon_punctatus
ENSLACG00000015551	DDX56	89	76.575	ENSSPAG00000009392	ddx56	98	74.151	Stegastes_partitus
ENSLACG00000015551	DDX56	96	66.910	ENSSSCG00000016745	DDX56	99	66.362	Sus_scrofa
ENSLACG00000015551	DDX56	97	70.483	ENSTRUG00000018623	ddx56	99	69.892	Takifugu_rubripes
ENSLACG00000015551	DDX56	96	69.713	ENSTNIG00000013593	ddx56	99	68.761	Tetraodon_nigroviridis
ENSLACG00000015551	DDX56	97	66.184	ENSTBEG00000007119	DDX56	98	66.422	Tupaia_belangeri
ENSLACG00000015551	DDX56	83	66.316	ENSTTRG00000010552	DDX56	98	66.102	Tursiops_truncatus
ENSLACG00000015551	DDX56	97	65.642	ENSUAMG00000014194	DDX56	98	65.872	Ursus_americanus
ENSLACG00000015551	DDX56	97	65.642	ENSUMAG00000009666	DDX56	98	65.872	Ursus_maritimus
ENSLACG00000015551	DDX56	97	64.481	ENSVVUG00000011905	DDX56	97	65.434	Vulpes_vulpes
ENSLACG00000015551	DDX56	96	72.313	ENSXETG00000019000	ddx56	99	73.126	Xenopus_tropicalis
ENSLACG00000015551	DDX56	97	70.255	ENSXCOG00000017413	ddx56	98	70.201	Xiphophorus_couchianus
ENSLACG00000015551	DDX56	97	72.232	ENSXMAG00000018749	ddx56	98	72.000	Xiphophorus_maculatus