EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000015558 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 2770 bases
Position: chrJH127035.1:1289111-1291880
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000017661	RVT_1	PF00078.27	1.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000017791	-	2025	-	ENSLACP00000017661	675 (aa)	-	H3B6Z0

Gene Model

Click here to download ENSLACG00000015558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015558's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000015558	-	91	33.538	ENSLACG00000005007	-	99	33.538
ENSLACG00000015558	-	89	30.903	ENSLACG00000009011	-	89	30.964
ENSLACG00000015558	-	91	34.572	ENSLACG00000016980	-	71	34.572
ENSLACG00000015558	-	69	38.318	ENSLACG00000004343	-	64	38.318
ENSLACG00000015558	-	96	31.564	ENSLACG00000018380	-	100	31.564
ENSLACG00000015558	-	99	31.199	ENSLACG00000011272	-	98	31.199
ENSLACG00000015558	-	82	30.035	ENSLACG00000002512	-	99	30.035
ENSLACG00000015558	-	69	32.157	ENSLACG00000018782	-	61	32.157
ENSLACG00000015558	-	71	38.542	ENSLACG00000002665	-	65	38.542
ENSLACG00000015558	-	77	32.381	ENSLACG00000007522	-	76	32.381
ENSLACG00000015558	-	68	30.986	ENSLACG00000007830	-	63	30.986
ENSLACG00000015558	-	63	30.222	ENSLACG00000011297	-	56	30.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000015558	-	85	32.450	ENSAMXG00000032559	-	55	32.450	Astyanax_mexicanus
ENSLACG00000015558	-	75	31.624	ENSAMXG00000038033	-	58	31.624	Astyanax_mexicanus
ENSLACG00000015558	-	58	31.188	ENSCING00000021231	-	54	31.188	Ciona_intestinalis
ENSLACG00000015558	-	79	32.906	ENSCVAG00000020907	-	74	32.906	Cyprinodon_variegatus
ENSLACG00000015558	-	61	34.483	ENSGAGG00000007552	-	64	34.483	Gopherus_agassizii
ENSLACG00000015558	-	67	37.500	ENSGAGG00000002613	-	65	37.500	Gopherus_agassizii
ENSLACG00000015558	-	68	62.844	ENSLOCG00000009957	-	55	62.844	Lepisosteus_oculatus
ENSLACG00000015558	-	68	30.986	ENSORLG00020018561	-	52	30.986	Oryzias_latipes_hni
ENSLACG00000015558	-	79	30.189	ENSORLG00015000379	-	76	30.189	Oryzias_latipes_hsok
ENSLACG00000015558	-	62	38.710	ENSPSIG00000001614	-	64	38.710	Pelodiscus_sinensis
ENSLACG00000015558	-	54	30.000	ENSPSIG00000000193	-	77	30.000	Pelodiscus_sinensis
ENSLACG00000015558	-	85	30.047	ENSPREG00000006052	-	55	30.047	Poecilia_reticulata
ENSLACG00000015558	-	85	30.806	ENSXMAG00000023370	-	55	30.806	Xiphophorus_maculatus
ENSLACG00000015558	-	77	30.000	ENSXMAG00000029360	-	57	30.000	Xiphophorus_maculatus