EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000015684 (Gene tree)
Gene ID: 102359315
Gene Symbol: SNRNP70
Alias: RNPU1Z|RPU1|SNRP70|Snp1|U1-70K
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 42237 bases
Position: chrJH126891.1:1327891-1370127
Accession: 102359315
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000017806	RRM_1	PF00076.22	4.4e-18	1	1
ENSLACP00000017806	U1snRNP70_N	PF12220.8	6.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000017936	SNRNP70-201	2280	XM_005996736	ENSLACP00000017806	457 (aa)	-	H3B7D5

Gene Model

Click here to download ENSLACG00000015684's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015684's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000015684	SNRNP70	52	47.131	WBGene00004390	rnp-7	56	48.958	Caenorhabditis_elegans
ENSLACG00000015684	SNRNP70	99	74.123	ENSCPBG00000014841	SNRNP70	50	91.204	Chrysemys_picta_bellii
ENSLACG00000015684	SNRNP70	60	74.733	ENSGACG00000000448	snrnp70	88	71.530	Gasterosteus_aculeatus
ENSLACG00000015684	SNRNP70	52	83.333	ENSLAFG00000028536	SNRNP70	94	91.667	Loxodonta_africana
ENSLACG00000015684	SNRNP70	82	61.008	ENSPCIG00000007296	SNRNP70	51	91.667	Phascolarctos_cinereus
ENSLACG00000015684	SNRNP70	99	68.559	ENSSPUG00000016621	SNRNP70	51	91.204	Sphenodon_punctatus
ENSLACG00000015684	SNRNP70	99	62.338	ENSXETG00000022919	snrnp70	54	90.278	Xenopus_tropicalis