EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000015876 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1596 bases
Position: chrJH126683.1:1385357-1386952
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018020	APOBEC_N	PF08210.11	1.4e-42	1	2
ENSLACP00000018020	APOBEC_N	PF08210.11	1.4e-42	2	2
ENSLACP00000018020	APOBEC_C	PF05240.14	1.4e-28	1	2
ENSLACP00000018020	APOBEC_C	PF05240.14	1.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000018151	-	1032	-	ENSLACP00000018020	344 (aa)	-	H3B7Z9

Gene Model

Click here to download ENSLACG00000015876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015876's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000015876	-	89	30.822	ENSLACG00000015985	APOBEC2	81	30.822

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000015876	-	96	40.964	ENSACAG00000024915	-	95	40.964	Anolis_carolinensis
ENSLACG00000015876	-	97	41.618	ENSLOCG00000003595	-	64	41.618	Lepisosteus_oculatus
ENSLACG00000015876	-	92	44.311	ENSMODG00000029467	-	64	44.311	Monodelphis_domestica
ENSLACG00000015876	-	99	34.091	ENSPKIG00000010937	-	86	33.708	Paramormyrops_kingsleyae
ENSLACG00000015876	-	94	40.230	ENSPCIG00000027633	-	67	40.230	Phascolarctos_cinereus
ENSLACG00000015876	-	94	42.529	ENSSHAG00000005252	-	67	42.529	Sarcophilus_harrisii
ENSLACG00000015876	-	89	37.654	ENSSFOG00015006223	-	95	37.654	Scleropages_formosus