EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000015903 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 2546 bases
Position: chrJH126959.1:1392328-1394873
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018049	RVT_1	PF00078.27	5.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000018180	-	2469	-	ENSLACP00000018049	823 (aa)	-	H3B828

Gene Model

Click here to download ENSLACG00000015903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015903's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000015903	-	90	84.504	ENSLACG00000005123	-	91	84.504
ENSLACG00000015903	-	82	85.169	ENSLACG00000007383	-	93	84.902
ENSLACG00000015903	-	98	42.359	ENSLACG00000002477	-	99	42.359

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000015903	-	88	35.149	ENSORLG00000030308	-	80	35.188	Oryzias_latipes
ENSLACG00000015903	-	88	35.019	ENSORLG00000030578	-	80	35.058	Oryzias_latipes
ENSLACG00000015903	-	88	35.202	ENSORLG00015013910	-	87	35.241	Oryzias_latipes_hsok
ENSLACG00000015903	-	100	40.391	ENSORLG00015002919	-	82	40.643	Oryzias_latipes_hsok
ENSLACG00000015903	-	58	45.149	ENSPSIG00000000993	-	96	45.149	Pelodiscus_sinensis
ENSLACG00000015903	-	100	46.963	ENSPSIG00000000229	-	81	46.963	Pelodiscus_sinensis
ENSLACG00000015903	-	100	46.963	ENSPSIG00000000630	-	81	46.963	Pelodiscus_sinensis
ENSLACG00000015903	-	58	44.930	ENSPSIG00000001231	-	100	44.930	Pelodiscus_sinensis
ENSLACG00000015903	-	82	35.211	ENSPSIG00000001059	-	99	35.211	Pelodiscus_sinensis
ENSLACG00000015903	-	78	47.554	ENSPSIG00000000618	-	92	47.554	Pelodiscus_sinensis
ENSLACG00000015903	-	100	46.963	ENSPSIG00000001155	-	94	46.963	Pelodiscus_sinensis
ENSLACG00000015903	-	58	45.020	ENSPSIG00000001353	-	100	45.020	Pelodiscus_sinensis
ENSLACG00000015903	-	73	36.116	ENSPSIG00000001022	-	94	36.116	Pelodiscus_sinensis
ENSLACG00000015903	-	100	46.963	ENSPSIG00000001183	-	81	46.963	Pelodiscus_sinensis
ENSLACG00000015903	-	51	47.273	ENSPSIG00000001413	-	95	47.273	Pelodiscus_sinensis
ENSLACG00000015903	-	100	46.963	ENSPSIG00000001896	-	81	46.963	Pelodiscus_sinensis
ENSLACG00000015903	-	55	46.300	ENSPSIG00000001300	-	95	46.300	Pelodiscus_sinensis
ENSLACG00000015903	-	57	44.869	ENSPSIG00000001221	-	100	44.869	Pelodiscus_sinensis
ENSLACG00000015903	-	50	47.113	ENSPSIG00000001599	-	100	47.113	Pelodiscus_sinensis
ENSLACG00000015903	-	71	46.623	ENSPSIG00000001546	-	100	46.623	Pelodiscus_sinensis
ENSLACG00000015903	-	89	46.499	ENSPSIG00000000104	-	97	46.499	Pelodiscus_sinensis
ENSLACG00000015903	-	56	50.101	ENSPSIG00000015886	-	70	50.101	Pelodiscus_sinensis
ENSLACG00000015903	-	50	46.991	ENSPSIG00000000708	-	100	46.991	Pelodiscus_sinensis
ENSLACG00000015903	-	58	45.149	ENSPSIG00000001486	-	99	45.149	Pelodiscus_sinensis
ENSLACG00000015903	-	51	47.273	ENSPSIG00000001884	-	95	47.273	Pelodiscus_sinensis
ENSLACG00000015903	-	70	46.644	ENSPSIG00000000041	-	99	46.644	Pelodiscus_sinensis
ENSLACG00000015903	-	58	44.890	ENSPSIG00000000044	-	99	44.890	Pelodiscus_sinensis