EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000015904 (Gene tree)
Gene ID: 102360914
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 393 bases
Position: chrJH126929.1:1392630-1393022
Accession: 102360914
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018050	LSM	PF01423.22	1.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000018181	LSM10-201	393	XM_005997236	ENSLACP00000018050	130 (aa)	XP_005997298	H3B829

Gene Model

Click here to download ENSLACG00000015904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000015904	LSM10	58	34.615	ENSLACG00000001955	SNRPD1	62	33.784
ENSLACG00000015904	LSM10	52	30.882	ENSLACG00000015192	SNRPD3	54	30.882
ENSLACG00000015904	LSM10	52	32.857	ENSLACG00000015064	LSM2	74	32.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000015904	LSM10	95	72.358	ENSG00000181817	LSM10	100	72.358	Homo_sapiens
ENSLACG00000015904	LSM10	95	74.797	ENSAMEG00000019854	LSM10	100	74.797	Ailuropoda_melanoleuca
ENSLACG00000015904	LSM10	89	65.517	ENSACIG00000015420	oscp1a	77	65.517	Amphilophus_citrinellus
ENSLACG00000015904	LSM10	89	62.931	ENSAOCG00000015618	LSM10	96	62.931	Amphiprion_ocellaris
ENSLACG00000015904	LSM10	89	62.931	ENSAOCG00000014654	-	96	62.931	Amphiprion_ocellaris
ENSLACG00000015904	LSM10	88	62.609	ENSAOCG00000015607	LSM10	89	62.609	Amphiprion_ocellaris
ENSLACG00000015904	LSM10	89	62.931	ENSAPEG00000021845	-	96	62.931	Amphiprion_percula
ENSLACG00000015904	LSM10	88	62.609	ENSAPEG00000021851	LSM10	89	62.609	Amphiprion_percula
ENSLACG00000015904	LSM10	94	57.377	ENSATEG00000006310	oscp1a	90	57.377	Anabas_testudineus
ENSLACG00000015904	LSM10	95	61.789	ENSACAG00000001231	LSM10	100	61.789	Anolis_carolinensis
ENSLACG00000015904	LSM10	92	75.630	ENSANAG00000031489	-	98	75.630	Aotus_nancymaae
ENSLACG00000015904	LSM10	95	73.984	ENSANAG00000018759	-	100	73.984	Aotus_nancymaae
ENSLACG00000015904	LSM10	89	63.793	ENSACLG00000004728	oscp1a	94	63.793	Astatotilapia_calliptera
ENSLACG00000015904	LSM10	89	62.931	ENSAMXG00000025301	oscp1a	96	62.931	Astyanax_mexicanus
ENSLACG00000015904	LSM10	92	72.269	ENSBTAG00000024096	LSM10	98	72.269	Bos_taurus
ENSLACG00000015904	LSM10	95	73.171	ENSCJAG00000044880	LSM10	100	73.171	Callithrix_jacchus
ENSLACG00000015904	LSM10	95	75.610	ENSCAFG00000003382	LSM10	100	75.610	Canis_familiaris
ENSLACG00000015904	LSM10	95	75.610	ENSCAFG00020008920	LSM10	100	75.610	Canis_lupus_dingo
ENSLACG00000015904	LSM10	92	72.269	ENSCHIG00000009398	LSM10	98	72.269	Capra_hircus
ENSLACG00000015904	LSM10	95	71.545	ENSCAPG00000012567	LSM10	100	71.545	Cavia_aperea
ENSLACG00000015904	LSM10	95	71.545	ENSCPOG00000039302	LSM10	100	71.545	Cavia_porcellus
ENSLACG00000015904	LSM10	95	73.984	ENSCCAG00000018913	-	100	73.984	Cebus_capucinus
ENSLACG00000015904	LSM10	92	73.109	ENSCCAG00000008378	-	97	73.109	Cebus_capucinus
ENSLACG00000015904	LSM10	95	73.984	ENSCATG00000006589	LSM10	100	73.984	Cercocebus_atys
ENSLACG00000015904	LSM10	95	73.171	ENSCLAG00000008633	LSM10	100	73.171	Chinchilla_lanigera
ENSLACG00000015904	LSM10	95	73.984	ENSCSAG00000000134	LSM10	100	73.984	Chlorocebus_sabaeus
ENSLACG00000015904	LSM10	95	71.200	ENSCHOG00000008615	LSM10	100	71.200	Choloepus_hoffmanni
ENSLACG00000015904	LSM10	93	31.405	ENSCING00000024984	-	97	31.405	Ciona_intestinalis
ENSLACG00000015904	LSM10	78	33.333	ENSCSAVG00000001896	-	87	33.333	Ciona_savignyi
ENSLACG00000015904	LSM10	95	73.984	ENSCANG00000019928	LSM10	100	73.984	Colobus_angolensis_palliatus
ENSLACG00000015904	LSM10	93	73.554	ENSCGRG00001004317	-	99	73.554	Cricetulus_griseus_chok1gshd
ENSLACG00000015904	LSM10	82	69.725	ENSCGRG00001022673	-	89	69.725	Cricetulus_griseus_chok1gshd
ENSLACG00000015904	LSM10	82	69.725	ENSCGRG00000015514	-	89	69.725	Cricetulus_griseus_crigri
ENSLACG00000015904	LSM10	93	73.554	ENSCGRG00000014935	-	99	73.554	Cricetulus_griseus_crigri
ENSLACG00000015904	LSM10	88	59.130	ENSCSEG00000010374	oscp1a	77	59.130	Cynoglossus_semilaevis
ENSLACG00000015904	LSM10	93	59.504	ENSCVAG00000001536	oscp1a	91	59.504	Cyprinodon_variegatus
ENSLACG00000015904	LSM10	93	68.595	ENSDARG00000101222	oscp1a	100	68.595	Danio_rerio
ENSLACG00000015904	LSM10	65	65.882	ENSDARG00000109563	CABZ01074453.1	99	65.882	Danio_rerio
ENSLACG00000015904	LSM10	94	75.410	ENSDNOG00000036662	LSM10	99	75.410	Dasypus_novemcinctus
ENSLACG00000015904	LSM10	95	73.171	ENSDORG00000007579	Lsm10	100	73.171	Dipodomys_ordii
ENSLACG00000015904	LSM10	95	73.171	ENSETEG00000005703	LSM10	100	73.171	Echinops_telfairi
ENSLACG00000015904	LSM10	93	49.587	ENSEBUG00000001312	oscp1a	99	49.587	Eptatretus_burgeri
ENSLACG00000015904	LSM10	95	75.610	ENSEASG00005012194	LSM10	100	75.610	Equus_asinus_asinus
ENSLACG00000015904	LSM10	95	75.610	ENSECAG00000005071	LSM10	100	75.610	Equus_caballus
ENSLACG00000015904	LSM10	95	74.797	ENSEEUG00000012032	LSM10	100	74.797	Erinaceus_europaeus
ENSLACG00000015904	LSM10	93	63.636	ENSELUG00000007452	oscp1a	99	63.636	Esox_lucius
ENSLACG00000015904	LSM10	95	65.041	ENSFALG00000000851	LSM10	100	65.041	Ficedula_albicollis
ENSLACG00000015904	LSM10	95	73.171	ENSFDAG00000021056	LSM10	100	73.171	Fukomys_damarensis
ENSLACG00000015904	LSM10	82	62.617	ENSFHEG00000001058	oscp1a	92	62.617	Fundulus_heteroclitus
ENSLACG00000015904	LSM10	85	60.714	ENSGMOG00000019832	oscp1a	94	60.714	Gadus_morhua
ENSLACG00000015904	LSM10	95	69.106	ENSGALG00000002127	LSM10	100	69.106	Gallus_gallus
ENSLACG00000015904	LSM10	79	57.282	ENSGAFG00000016445	oscp1a	84	57.282	Gambusia_affinis
ENSLACG00000015904	LSM10	89	57.759	ENSGACG00000002329	oscp1a	95	57.759	Gasterosteus_aculeatus
ENSLACG00000015904	LSM10	95	68.293	ENSGAGG00000024848	LSM10	100	68.293	Gopherus_agassizii
ENSLACG00000015904	LSM10	95	73.171	ENSGGOG00000003556	LSM10	100	73.171	Gorilla_gorilla
ENSLACG00000015904	LSM10	89	63.793	ENSHBUG00000001722	oscp1a	94	63.793	Haplochromis_burtoni
ENSLACG00000015904	LSM10	95	71.545	ENSHGLG00000011625	LSM10	100	71.545	Heterocephalus_glaber_female
ENSLACG00000015904	LSM10	95	71.545	ENSHGLG00100001769	LSM10	100	71.545	Heterocephalus_glaber_male
ENSLACG00000015904	LSM10	80	65.385	ENSIPUG00000005808	oscp1a	90	65.385	Ictalurus_punctatus
ENSLACG00000015904	LSM10	95	73.984	ENSSTOG00000000606	LSM10	100	73.984	Ictidomys_tridecemlineatus
ENSLACG00000015904	LSM10	93	61.157	ENSKMAG00000012143	oscp1a	99	61.157	Kryptolebias_marmoratus
ENSLACG00000015904	LSM10	92	61.345	ENSLBEG00000017764	oscp1a	98	61.345	Labrus_bergylta
ENSLACG00000015904	LSM10	90	68.376	ENSLOCG00000018277	oscp1a	96	68.376	Lepisosteus_oculatus
ENSLACG00000015904	LSM10	95	73.984	ENSLAFG00000009600	LSM10	100	73.984	Loxodonta_africana
ENSLACG00000015904	LSM10	95	73.984	ENSMFAG00000009115	LSM10	100	73.984	Macaca_fascicularis
ENSLACG00000015904	LSM10	95	73.984	ENSMMUG00000017338	LSM10	100	73.984	Macaca_mulatta
ENSLACG00000015904	LSM10	95	73.984	ENSMNEG00000020023	LSM10	100	73.984	Macaca_nemestrina
ENSLACG00000015904	LSM10	95	73.984	ENSMLEG00000025150	LSM10	100	73.984	Mandrillus_leucophaeus
ENSLACG00000015904	LSM10	91	61.864	ENSMAMG00000004427	oscp1a	97	61.864	Mastacembelus_armatus
ENSLACG00000015904	LSM10	89	63.793	ENSMZEG00005026307	oscp1a	94	63.793	Maylandia_zebra
ENSLACG00000015904	LSM10	95	67.480	ENSMGAG00000015707	LSM10	100	67.480	Meleagris_gallopavo
ENSLACG00000015904	LSM10	93	72.727	ENSMAUG00000016624	Lsm10	99	72.727	Mesocricetus_auratus
ENSLACG00000015904	LSM10	93	72.727	ENSMOCG00000021943	Lsm10	99	72.727	Microtus_ochrogaster
ENSLACG00000015904	LSM10	92	59.167	ENSMMOG00000013597	oscp1a	90	59.167	Mola_mola
ENSLACG00000015904	LSM10	95	73.171	ENSMODG00000023328	LSM10	100	73.171	Monodelphis_domestica
ENSLACG00000015904	LSM10	93	71.901	MGP_CAROLIEiJ_G0026467	Lsm10	100	73.118	Mus_caroli
ENSLACG00000015904	LSM10	93	71.901	ENSMUSG00000050188	Lsm10	100	73.118	Mus_musculus
ENSLACG00000015904	LSM10	93	71.901	MGP_PahariEiJ_G0028798	Lsm10	100	73.118	Mus_pahari
ENSLACG00000015904	LSM10	93	71.901	MGP_SPRETEiJ_G0027446	Lsm10	100	73.118	Mus_spretus
ENSLACG00000015904	LSM10	95	75.610	ENSMPUG00000018593	LSM10	100	75.610	Mustela_putorius_furo
ENSLACG00000015904	LSM10	95	73.984	ENSMLUG00000023895	LSM10	100	73.984	Myotis_lucifugus
ENSLACG00000015904	LSM10	95	72.358	ENSNGAG00000015011	Lsm10	100	72.358	Nannospalax_galili
ENSLACG00000015904	LSM10	89	64.655	ENSNBRG00000014306	oscp1a	94	64.655	Neolamprologus_brichardi
ENSLACG00000015904	LSM10	95	73.171	ENSNLEG00000033754	LSM10	100	73.171	Nomascus_leucogenys
ENSLACG00000015904	LSM10	95	73.171	ENSMEUG00000006313	LSM10	100	73.171	Notamacropus_eugenii
ENSLACG00000015904	LSM10	95	75.610	ENSOPRG00000001699	LSM10	100	75.610	Ochotona_princeps
ENSLACG00000015904	LSM10	95	73.171	ENSODEG00000019161	LSM10	100	73.171	Octodon_degus
ENSLACG00000015904	LSM10	89	64.655	ENSONIG00000020904	oscp1a	95	64.655	Oreochromis_niloticus
ENSLACG00000015904	LSM10	95	66.667	ENSOANG00000002066	LSM10	100	66.667	Ornithorhynchus_anatinus
ENSLACG00000015904	LSM10	95	74.797	ENSOCUG00000005333	LSM10	100	74.797	Oryctolagus_cuniculus
ENSLACG00000015904	LSM10	92	62.185	ENSORLG00000009504	oscp1a	98	62.185	Oryzias_latipes
ENSLACG00000015904	LSM10	92	62.185	ENSORLG00020016201	oscp1a	98	62.185	Oryzias_latipes_hni
ENSLACG00000015904	LSM10	92	63.025	ENSORLG00015007794	oscp1a	98	63.025	Oryzias_latipes_hsok
ENSLACG00000015904	LSM10	95	75.610	ENSOGAG00000002653	LSM10	100	75.610	Otolemur_garnettii
ENSLACG00000015904	LSM10	92	72.269	ENSOARG00000009596	LSM10	98	72.269	Ovis_aries
ENSLACG00000015904	LSM10	95	72.358	ENSPPAG00000023465	LSM10	100	72.358	Pan_paniscus
ENSLACG00000015904	LSM10	95	75.610	ENSPPRG00000014619	LSM10	100	75.610	Panthera_pardus
ENSLACG00000015904	LSM10	95	75.610	ENSPTIG00000004613	LSM10	100	75.610	Panthera_tigris_altaica
ENSLACG00000015904	LSM10	95	72.358	ENSPTRG00000000539	LSM10	100	72.358	Pan_troglodytes
ENSLACG00000015904	LSM10	95	73.984	ENSPANG00000023172	LSM10	100	73.984	Papio_anubis
ENSLACG00000015904	LSM10	90	62.393	ENSPKIG00000003728	oscp1a	94	62.393	Paramormyrops_kingsleyae
ENSLACG00000015904	LSM10	95	69.919	ENSPSIG00000000590	LSM10	100	69.919	Pelodiscus_sinensis
ENSLACG00000015904	LSM10	58	59.211	ENSPMGG00000015718	oscp1a	99	59.211	Periophthalmus_magnuspinnatus
ENSLACG00000015904	LSM10	79	73.786	ENSPCIG00000014865	LSM10	76	73.786	Phascolarctos_cinereus
ENSLACG00000015904	LSM10	86	60.714	ENSPFOG00000020490	oscp1a	95	60.714	Poecilia_formosa
ENSLACG00000015904	LSM10	86	60.714	ENSPLAG00000016537	oscp1a	85	60.714	Poecilia_latipinna
ENSLACG00000015904	LSM10	83	60.185	ENSPMEG00000000174	oscp1a	94	60.185	Poecilia_mexicana
ENSLACG00000015904	LSM10	86	59.821	ENSPREG00000009899	oscp1a	85	59.821	Poecilia_reticulata
ENSLACG00000015904	LSM10	95	73.171	ENSPPYG00000001539	LSM10	100	73.171	Pongo_abelii
ENSLACG00000015904	LSM10	91	72.881	ENSPCAG00000002520	LSM10	97	72.881	Procavia_capensis
ENSLACG00000015904	LSM10	95	73.171	ENSPVAG00000008644	LSM10	100	73.171	Pteropus_vampyrus
ENSLACG00000015904	LSM10	89	63.793	ENSPNYG00000003138	oscp1a	94	63.793	Pundamilia_nyererei
ENSLACG00000015904	LSM10	91	62.712	ENSPNAG00000028829	oscp1a	98	62.712	Pygocentrus_nattereri
ENSLACG00000015904	LSM10	93	72.727	ENSRNOG00000025716	Lsm10	99	72.727	Rattus_norvegicus
ENSLACG00000015904	LSM10	95	73.984	ENSRBIG00000001561	LSM10	100	73.984	Rhinopithecus_bieti
ENSLACG00000015904	LSM10	95	73.984	ENSRROG00000011414	LSM10	100	73.984	Rhinopithecus_roxellana
ENSLACG00000015904	LSM10	95	73.984	ENSSBOG00000036413	-	100	73.984	Saimiri_boliviensis_boliviensis
ENSLACG00000015904	LSM10	95	72.358	ENSSHAG00000018056	LSM10	100	72.358	Sarcophilus_harrisii
ENSLACG00000015904	LSM10	93	62.810	ENSSFOG00015019954	lsm10	99	62.810	Scleropages_formosus
ENSLACG00000015904	LSM10	87	61.947	ENSSMAG00000001297	oscp1a	97	61.947	Scophthalmus_maximus
ENSLACG00000015904	LSM10	88	63.158	ENSSDUG00000007090	oscp1a	93	63.158	Seriola_dumerili
ENSLACG00000015904	LSM10	88	64.035	ENSSLDG00000000800	oscp1a	94	64.035	Seriola_lalandi_dorsalis
ENSLACG00000015904	LSM10	95	73.600	ENSSARG00000004211	LSM10	100	74.400	Sorex_araneus
ENSLACG00000015904	LSM10	87	62.832	ENSSPAG00000009229	oscp1a	93	62.832	Stegastes_partitus
ENSLACG00000015904	LSM10	95	73.171	ENSSSCG00000038916	LSM10	100	73.171	Sus_scrofa
ENSLACG00000015904	LSM10	94	65.574	ENSTGUG00000001602	-	100	65.574	Taeniopygia_guttata
ENSLACG00000015904	LSM10	94	65.574	ENSTGUG00000001600	-	100	65.574	Taeniopygia_guttata
ENSLACG00000015904	LSM10	92	61.345	ENSTRUG00000010531	oscp1a	96	61.345	Takifugu_rubripes
ENSLACG00000015904	LSM10	95	73.984	ENSTBEG00000016674	LSM10	100	73.984	Tupaia_belangeri
ENSLACG00000015904	LSM10	95	75.610	ENSUAMG00000020265	LSM10	100	75.610	Ursus_americanus
ENSLACG00000015904	LSM10	98	73.228	ENSUMAG00000001438	LSM10	59	73.228	Ursus_maritimus
ENSLACG00000015904	LSM10	95	75.610	ENSVVUG00000023209	LSM10	100	75.610	Vulpes_vulpes
ENSLACG00000015904	LSM10	95	64.228	ENSXETG00000027631	lsm10	100	64.228	Xenopus_tropicalis
ENSLACG00000015904	LSM10	91	56.000	ENSXCOG00000018776	oscp1a	79	56.000	Xiphophorus_couchianus
ENSLACG00000015904	LSM10	83	59.259	ENSXMAG00000019963	oscp1a	86	59.259	Xiphophorus_maculatus