EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000015927 (Gene tree)
Gene ID: 102366405
Gene Symbol: CSTF2
Alias: CstF-64
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 36263 bases
Position: chrJH126674.1:1401135-1437397
Accession: 102366405
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018076	RRM_1	PF00076.22	1.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000018207	CSTF2-201	2054	XM_005991988	ENSLACP00000018076	588 (aa)	-	H3B855

Gene Model

Click here to download ENSLACG00000015927's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015927's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000015927	CSTF2	99	67.805	ENSG00000101811	CSTF2	93	84.360	Homo_sapiens
ENSLACG00000015927	CSTF2	99	60.204	ENSAPOG00000005630	cstf2	96	61.953	Acanthochromis_polyacanthus
ENSLACG00000015927	CSTF2	99	66.292	ENSAMEG00000002082	CSTF2	99	67.314	Ailuropoda_melanoleuca
ENSLACG00000015927	CSTF2	85	87.552	ENSAOCG00000020905	cstf2	96	62.267	Amphiprion_ocellaris
ENSLACG00000015927	CSTF2	85	87.552	ENSAPEG00000006526	cstf2	96	62.267	Amphiprion_percula
ENSLACG00000015927	CSTF2	99	58.532	ENSATEG00000018186	cstf2	96	60.374	Anabas_testudineus
ENSLACG00000015927	CSTF2	97	67.053	ENSAPLG00000007255	CSTF2	98	67.323	Anas_platyrhynchos
ENSLACG00000015927	CSTF2	99	67.370	ENSANAG00000022342	CSTF2	99	68.412	Aotus_nancymaae
ENSLACG00000015927	CSTF2	99	58.874	ENSACLG00000000779	cstf2	94	61.046	Astatotilapia_calliptera
ENSLACG00000015927	CSTF2	73	98.413	ENSAMXG00000021477	cstf2	98	92.754	Astyanax_mexicanus
ENSLACG00000015927	CSTF2	99	68.040	ENSBTAG00000003547	CSTF2	99	68.040	Bos_taurus
ENSLACG00000015927	CSTF2	99	67.647	ENSCJAG00000004422	CSTF2	99	77.667	Callithrix_jacchus
ENSLACG00000015927	CSTF2	99	65.097	ENSCAFG00000017551	CSTF2	99	66.121	Canis_familiaris
ENSLACG00000015927	CSTF2	99	67.480	ENSCAFG00020007619	CSTF2	99	68.412	Canis_lupus_dingo
ENSLACG00000015927	CSTF2	99	68.369	ENSCHIG00000016994	CSTF2	99	68.369	Capra_hircus
ENSLACG00000015927	CSTF2	99	67.974	ENSTSYG00000006529	CSTF2	99	69.028	Carlito_syrichta
ENSLACG00000015927	CSTF2	99	68.033	ENSCPOG00000015255	CSTF2	85	91.667	Cavia_porcellus
ENSLACG00000015927	CSTF2	99	67.647	ENSCCAG00000032975	CSTF2	99	68.699	Cebus_capucinus
ENSLACG00000015927	CSTF2	99	68.740	ENSCATG00000022835	CSTF2	99	68.740	Cercocebus_atys
ENSLACG00000015927	CSTF2	99	68.085	ENSCLAG00000001904	CSTF2	87	90.000	Chinchilla_lanigera
ENSLACG00000015927	CSTF2	99	67.805	ENSCSAG00000010360	CSTF2	99	68.740	Chlorocebus_sabaeus
ENSLACG00000015927	CSTF2	54	94.340	ENSCHOG00000012803	CSTF2	63	94.340	Choloepus_hoffmanni
ENSLACG00000015927	CSTF2	99	66.921	ENSCPBG00000014293	CSTF2	99	67.428	Chrysemys_picta_bellii
ENSLACG00000015927	CSTF2	99	67.805	ENSCANG00000030612	CSTF2	99	68.740	Colobus_angolensis_palliatus
ENSLACG00000015927	CSTF2	99	62.684	ENSCGRG00001023023	Cstf2	99	61.059	Cricetulus_griseus_chok1gshd
ENSLACG00000015927	CSTF2	99	62.171	ENSCGRG00000003897	Cstf2	99	62.480	Cricetulus_griseus_crigri
ENSLACG00000015927	CSTF2	99	58.136	ENSCVAG00000005731	cstf2	97	60.299	Cyprinodon_variegatus
ENSLACG00000015927	CSTF2	74	98.182	ENSDARG00000090788	cstf2	97	95.312	Danio_rerio
ENSLACG00000015927	CSTF2	99	64.648	ENSDORG00000007195	Cstf2	89	89.506	Dipodomys_ordii
ENSLACG00000015927	CSTF2	71	86.957	ENSETEG00000004931	CSTF2	67	86.957	Echinops_telfairi
ENSLACG00000015927	CSTF2	99	68.249	ENSEASG00005001216	CSTF2	99	68.689	Equus_asinus_asinus
ENSLACG00000015927	CSTF2	99	68.249	ENSECAG00000009325	CSTF2	99	68.689	Equus_caballus
ENSLACG00000015927	CSTF2	99	67.532	ENSFCAG00000007000	CSTF2	99	68.576	Felis_catus
ENSLACG00000015927	CSTF2	92	65.979	ENSFALG00000003859	CSTF2	99	66.382	Ficedula_albicollis
ENSLACG00000015927	CSTF2	99	66.502	ENSFDAG00000002416	CSTF2	99	66.197	Fukomys_damarensis
ENSLACG00000015927	CSTF2	85	85.246	ENSFHEG00000017065	cstf2	94	59.901	Fundulus_heteroclitus
ENSLACG00000015927	CSTF2	99	56.729	ENSGMOG00000005145	cstf2	99	59.014	Gadus_morhua
ENSLACG00000015927	CSTF2	99	66.720	ENSGALG00000006760	CSTF2	99	80.132	Gallus_gallus
ENSLACG00000015927	CSTF2	99	55.390	ENSGACG00000017326	cstf2	94	80.392	Gasterosteus_aculeatus
ENSLACG00000015927	CSTF2	99	68.594	ENSGAGG00000006037	CSTF2	99	68.799	Gopherus_agassizii
ENSLACG00000015927	CSTF2	99	67.805	ENSGGOG00000022267	CSTF2	99	68.852	Gorilla_gorilla
ENSLACG00000015927	CSTF2	99	58.844	ENSHBUG00000016183	cstf2	94	61.008	Haplochromis_burtoni
ENSLACG00000015927	CSTF2	99	66.174	ENSHGLG00000000659	-	88	88.485	Heterocephalus_glaber_female
ENSLACG00000015927	CSTF2	99	56.210	ENSHGLG00000013455	-	99	56.439	Heterocephalus_glaber_female
ENSLACG00000015927	CSTF2	99	56.210	ENSHGLG00100015391	-	99	56.439	Heterocephalus_glaber_male
ENSLACG00000015927	CSTF2	99	66.174	ENSHGLG00100001130	-	88	88.485	Heterocephalus_glaber_male
ENSLACG00000015927	CSTF2	99	58.418	ENSHCOG00000005157	cstf2	97	60.500	Hippocampus_comes
ENSLACG00000015927	CSTF2	99	58.979	ENSIPUG00000017839	cstf2	98	59.967	Ictalurus_punctatus
ENSLACG00000015927	CSTF2	99	64.773	ENSSTOG00000023445	CSTF2	87	89.937	Ictidomys_tridecemlineatus
ENSLACG00000015927	CSTF2	99	63.149	ENSJJAG00000020507	Cstf2	87	89.937	Jaculus_jaculus
ENSLACG00000015927	CSTF2	85	86.364	ENSKMAG00000001068	cstf2	97	60.067	Kryptolebias_marmoratus
ENSLACG00000015927	CSTF2	54	94.915	ENSLBEG00000028720	cstf2	76	90.625	Labrus_bergylta
ENSLACG00000015927	CSTF2	99	63.697	ENSLOCG00000015300	cstf2	93	62.810	Lepisosteus_oculatus
ENSLACG00000015927	CSTF2	99	68.144	ENSLAFG00000000474	CSTF2	99	65.902	Loxodonta_africana
ENSLACG00000015927	CSTF2	99	67.805	ENSMFAG00000043888	CSTF2	99	68.740	Macaca_fascicularis
ENSLACG00000015927	CSTF2	99	67.974	ENSMMUG00000013008	CSTF2	99	69.028	Macaca_mulatta
ENSLACG00000015927	CSTF2	99	67.974	ENSMNEG00000041824	CSTF2	99	69.028	Macaca_nemestrina
ENSLACG00000015927	CSTF2	99	67.805	ENSMLEG00000036870	CSTF2	99	68.740	Mandrillus_leucophaeus
ENSLACG00000015927	CSTF2	83	86.957	ENSMAMG00000020364	cstf2	96	60.445	Mastacembelus_armatus
ENSLACG00000015927	CSTF2	99	58.874	ENSMZEG00005007200	cstf2	97	61.046	Maylandia_zebra
ENSLACG00000015927	CSTF2	93	58.399	ENSMGAG00000004139	CSTF2	99	78.261	Meleagris_gallopavo
ENSLACG00000015927	CSTF2	99	63.115	ENSMAUG00000000965	Cstf2	99	61.154	Mesocricetus_auratus
ENSLACG00000015927	CSTF2	99	69.016	ENSMICG00000014121	CSTF2	99	67.103	Microcebus_murinus
ENSLACG00000015927	CSTF2	99	63.097	ENSMOCG00000008081	Cstf2	99	64.803	Microtus_ochrogaster
ENSLACG00000015927	CSTF2	87	93.970	ENSMMOG00000000538	cstf2	97	55.424	Mola_mola
ENSLACG00000015927	CSTF2	99	68.257	ENSMODG00000011785	CSTF2	99	65.873	Monodelphis_domestica
ENSLACG00000015927	CSTF2	99	63.011	MGP_CAROLIEiJ_G0033383	Cstf2	87	90.625	Mus_caroli
ENSLACG00000015927	CSTF2	99	63.011	ENSMUSG00000031256	Cstf2	87	90.625	Mus_musculus
ENSLACG00000015927	CSTF2	99	63.115	MGP_PahariEiJ_G0031923	Cstf2	99	64.869	Mus_pahari
ENSLACG00000015927	CSTF2	99	63.011	MGP_SPRETEiJ_G0034548	Cstf2	87	90.625	Mus_spretus
ENSLACG00000015927	CSTF2	99	60.709	ENSMPUG00000002339	CSTF2	99	65.062	Mustela_putorius_furo
ENSLACG00000015927	CSTF2	99	65.319	ENSMLUG00000004598	CSTF2	98	65.576	Myotis_lucifugus
ENSLACG00000015927	CSTF2	99	63.830	ENSNGAG00000021985	Cstf2	99	65.905	Nannospalax_galili
ENSLACG00000015927	CSTF2	96	53.147	ENSNBRG00000021694	cstf2	100	56.743	Neolamprologus_brichardi
ENSLACG00000015927	CSTF2	99	67.805	ENSNLEG00000007510	CSTF2	99	66.722	Nomascus_leucogenys
ENSLACG00000015927	CSTF2	99	67.399	ENSMEUG00000011186	-	99	63.796	Notamacropus_eugenii
ENSLACG00000015927	CSTF2	91	63.803	ENSMEUG00000014025	-	99	62.589	Notamacropus_eugenii
ENSLACG00000015927	CSTF2	99	63.907	ENSMEUG00000007875	-	99	62.520	Notamacropus_eugenii
ENSLACG00000015927	CSTF2	82	73.585	ENSOPRG00000003106	CSTF2	86	70.000	Ochotona_princeps
ENSLACG00000015927	CSTF2	99	65.794	ENSODEG00000002059	CSTF2	99	62.031	Octodon_degus
ENSLACG00000015927	CSTF2	99	51.256	ENSONIG00000002631	cstf2	99	53.880	Oreochromis_niloticus
ENSLACG00000015927	CSTF2	99	64.390	ENSOCUG00000010468	CSTF2	99	65.574	Oryctolagus_cuniculus
ENSLACG00000015927	CSTF2	99	58.065	ENSORLG00000001380	cstf2	97	59.699	Oryzias_latipes
ENSLACG00000015927	CSTF2	99	58.065	ENSORLG00020021917	cstf2	97	59.933	Oryzias_latipes_hni
ENSLACG00000015927	CSTF2	99	58.065	ENSORLG00015011996	cstf2	97	59.699	Oryzias_latipes_hsok
ENSLACG00000015927	CSTF2	99	59.729	ENSOMEG00000015507	cstf2	97	61.409	Oryzias_melastigma
ENSLACG00000015927	CSTF2	99	66.406	ENSOGAG00000011192	CSTF2	99	66.406	Otolemur_garnettii
ENSLACG00000015927	CSTF2	99	68.144	ENSOARG00000001022	CSTF2	99	68.144	Ovis_aries
ENSLACG00000015927	CSTF2	99	67.805	ENSPPAG00000031804	CSTF2	99	68.852	Pan_paniscus
ENSLACG00000015927	CSTF2	99	67.642	ENSPPRG00000022492	CSTF2	99	68.576	Panthera_pardus
ENSLACG00000015927	CSTF2	99	67.317	ENSPTIG00000009922	CSTF2	99	68.249	Panthera_tigris_altaica
ENSLACG00000015927	CSTF2	99	67.805	ENSPTRG00000022090	CSTF2	99	68.852	Pan_troglodytes
ENSLACG00000015927	CSTF2	99	67.805	ENSPANG00000002303	CSTF2	99	68.740	Papio_anubis
ENSLACG00000015927	CSTF2	99	60.477	ENSPKIG00000005033	cstf2	93	63.025	Paramormyrops_kingsleyae
ENSLACG00000015927	CSTF2	85	87.917	ENSPMGG00000006534	cstf2	97	61.307	Periophthalmus_magnuspinnatus
ENSLACG00000015927	CSTF2	99	62.787	ENSPEMG00000019415	Cstf2	99	61.154	Peromyscus_maniculatus_bairdii
ENSLACG00000015927	CSTF2	99	68.914	ENSPCIG00000002989	CSTF2	99	66.297	Phascolarctos_cinereus
ENSLACG00000015927	CSTF2	58	69.388	ENSPREG00000011481	cstf2	97	60.749	Poecilia_reticulata
ENSLACG00000015927	CSTF2	99	67.805	ENSPPYG00000020541	CSTF2	99	64.688	Pongo_abelii
ENSLACG00000015927	CSTF2	99	68.033	ENSPCOG00000027744	CSTF2	99	66.502	Propithecus_coquereli
ENSLACG00000015927	CSTF2	96	52.500	ENSPVAG00000008342	CSTF2	99	53.716	Pteropus_vampyrus
ENSLACG00000015927	CSTF2	99	60.067	ENSPNAG00000018887	cstf2	98	60.697	Pygocentrus_nattereri
ENSLACG00000015927	CSTF2	99	62.829	ENSRNOG00000048025	Cstf2	99	61.321	Rattus_norvegicus
ENSLACG00000015927	CSTF2	99	65.574	ENSRBIG00000030745	CSTF2	99	65.898	Rhinopithecus_bieti
ENSLACG00000015927	CSTF2	99	67.805	ENSRROG00000045042	CSTF2	99	68.740	Rhinopithecus_roxellana
ENSLACG00000015927	CSTF2	99	67.810	ENSSBOG00000021649	CSTF2	99	68.863	Saimiri_boliviensis_boliviensis
ENSLACG00000015927	CSTF2	97	64.559	ENSSHAG00000003681	CSTF2	92	65.894	Sarcophilus_harrisii
ENSLACG00000015927	CSTF2	99	60.774	ENSSFOG00015006348	cstf2	98	63.606	Scleropages_formosus
ENSLACG00000015927	CSTF2	99	58.773	ENSSMAG00000013463	cstf2	97	60.231	Scophthalmus_maximus
ENSLACG00000015927	CSTF2	68	80.602	ENSSPUG00000005288	-	99	81.605	Sphenodon_punctatus
ENSLACG00000015927	CSTF2	99	67.652	ENSSSCG00000012486	CSTF2	99	77.000	Sus_scrofa
ENSLACG00000015927	CSTF2	99	66.720	ENSTGUG00000002253	CSTF2	99	67.357	Taeniopygia_guttata
ENSLACG00000015927	CSTF2	99	60.168	ENSTNIG00000016860	cstf2	99	60.840	Tetraodon_nigroviridis
ENSLACG00000015927	CSTF2	62	100.000	ENSTBEG00000010029	-	60	100.000	Tupaia_belangeri
ENSLACG00000015927	CSTF2	99	64.715	ENSTTRG00000013556	CSTF2	99	65.738	Tursiops_truncatus
ENSLACG00000015927	CSTF2	99	66.613	ENSUAMG00000026605	CSTF2	99	64.907	Ursus_americanus
ENSLACG00000015927	CSTF2	99	66.557	ENSUMAG00000012417	CSTF2	95	78.082	Ursus_maritimus
ENSLACG00000015927	CSTF2	72	68.022	ENSVPAG00000006466	CSTF2	71	68.293	Vicugna_pacos
ENSLACG00000015927	CSTF2	99	65.097	ENSVVUG00000004717	CSTF2	99	66.121	Vulpes_vulpes
ENSLACG00000015927	CSTF2	99	59.934	ENSXETG00000009642	cstf2	99	60.762	Xenopus_tropicalis
ENSLACG00000015927	CSTF2	86	78.367	ENSXCOG00000016436	cstf2	70	92.958	Xiphophorus_couchianus
ENSLACG00000015927	CSTF2	59	68.091	ENSXMAG00000013524	cstf2	97	60.791	Xiphophorus_maculatus