EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000015981 (Gene tree)
Gene ID: 102353620
Gene Symbol: LSM12
Alias: FLJ30656
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 17944 bases
Position: chrJH126680.1:1416144-1434087
Accession: 102353620
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018141	AD	PF09793.9	3.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000018273	LSM12-201	2585	XM_005992200	ENSLACP00000018141	194 (aa)	XP_005992262	H3B8C0

Gene Model

Click here to download ENSLACG00000015981's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000015981's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000015981	LSM12	99	90.155	ENSG00000161654	LSM12	99	90.155	Homo_sapiens
ENSLACG00000015981	LSM12	100	87.755	ENSAPOG00000007907	lsm12b	100	87.755	Acanthochromis_polyacanthus
ENSLACG00000015981	LSM12	99	88.265	ENSAMEG00000018321	LSM12	99	88.265	Ailuropoda_melanoleuca
ENSLACG00000015981	LSM12	100	87.245	ENSACIG00000008538	lsm12b	100	87.245	Amphilophus_citrinellus
ENSLACG00000015981	LSM12	100	88.265	ENSAOCG00000021847	lsm12b	88	88.265	Amphiprion_ocellaris
ENSLACG00000015981	LSM12	100	88.265	ENSAPEG00000002252	lsm12b	100	88.265	Amphiprion_percula
ENSLACG00000015981	LSM12	100	88.776	ENSATEG00000005705	lsm12b	100	88.776	Anabas_testudineus
ENSLACG00000015981	LSM12	100	89.175	ENSACAG00000004618	LSM12	100	89.175	Anolis_carolinensis
ENSLACG00000015981	LSM12	99	90.155	ENSANAG00000029011	LSM12	99	90.909	Aotus_nancymaae
ENSLACG00000015981	LSM12	100	87.755	ENSACLG00000026332	lsm12b	100	87.755	Astatotilapia_calliptera
ENSLACG00000015981	LSM12	100	81.122	ENSAMXG00000036117	lsm12a	91	81.122	Astyanax_mexicanus
ENSLACG00000015981	LSM12	100	86.735	ENSAMXG00000032952	lsm12b	100	86.735	Astyanax_mexicanus
ENSLACG00000015981	LSM12	99	90.155	ENSBTAG00000016252	LSM12	99	90.155	Bos_taurus
ENSLACG00000015981	LSM12	99	90.155	ENSCJAG00000048480	LSM12	99	90.909	Callithrix_jacchus
ENSLACG00000015981	LSM12	99	90.155	ENSCAFG00000014379	LSM12	91	90.155	Canis_familiaris
ENSLACG00000015981	LSM12	99	90.155	ENSCAFG00020012173	LSM12	99	90.155	Canis_lupus_dingo
ENSLACG00000015981	LSM12	99	90.155	ENSCHIG00000018175	LSM12	99	90.155	Capra_hircus
ENSLACG00000015981	LSM12	99	90.155	ENSTSYG00000036361	LSM12	99	90.155	Carlito_syrichta
ENSLACG00000015981	LSM12	84	87.037	ENSCAPG00000009647	LSM12	89	87.037	Cavia_aperea
ENSLACG00000015981	LSM12	99	89.637	ENSCPOG00000012860	LSM12	99	91.743	Cavia_porcellus
ENSLACG00000015981	LSM12	99	90.155	ENSCCAG00000032905	LSM12	99	90.909	Cebus_capucinus
ENSLACG00000015981	LSM12	99	90.155	ENSCATG00000030577	-	99	90.909	Cercocebus_atys
ENSLACG00000015981	LSM12	99	90.155	ENSCLAG00000015759	LSM12	99	90.909	Chinchilla_lanigera
ENSLACG00000015981	LSM12	99	89.637	ENSCSAG00000003486	LSM12	99	89.637	Chlorocebus_sabaeus
ENSLACG00000015981	LSM12	56	90.826	ENSCHOG00000001198	LSM12	100	90.826	Choloepus_hoffmanni
ENSLACG00000015981	LSM12	100	88.144	ENSCPBG00000027105	LSM12	100	88.144	Chrysemys_picta_bellii
ENSLACG00000015981	LSM12	99	90.155	ENSCANG00000043328	LSM12	99	90.909	Colobus_angolensis_palliatus
ENSLACG00000015981	LSM12	99	90.155	ENSCGRG00001002094	Lsm12	99	90.909	Cricetulus_griseus_chok1gshd
ENSLACG00000015981	LSM12	90	82.184	ENSCGRG00000004316	Lsm12	98	82.184	Cricetulus_griseus_crigri
ENSLACG00000015981	LSM12	100	88.265	ENSCSEG00000008434	lsm12b	100	88.265	Cynoglossus_semilaevis
ENSLACG00000015981	LSM12	100	86.224	ENSCVAG00000008755	lsm12b	100	86.224	Cyprinodon_variegatus
ENSLACG00000015981	LSM12	100	78.061	ENSDARG00000028848	lsm12a	100	78.061	Danio_rerio
ENSLACG00000015981	LSM12	100	87.245	ENSDARG00000109510	lsm12b	100	87.245	Danio_rerio
ENSLACG00000015981	LSM12	99	90.674	ENSDNOG00000002418	LSM12	90	90.674	Dasypus_novemcinctus
ENSLACG00000015981	LSM12	99	90.155	ENSDORG00000016381	Lsm12	99	90.909	Dipodomys_ordii
ENSLACG00000015981	LSM12	77	33.742	FBgn0036057	CG14164	86	33.742	Drosophila_melanogaster
ENSLACG00000015981	LSM12	84	33.133	FBgn0030364	Lsm12	78	32.749	Drosophila_melanogaster
ENSLACG00000015981	LSM12	89	80.347	ENSETEG00000011012	-	99	80.347	Echinops_telfairi
ENSLACG00000015981	LSM12	99	89.637	ENSETEG00000008374	LSM12	99	89.637	Echinops_telfairi
ENSLACG00000015981	LSM12	85	67.273	ENSEBUG00000016299	lsm12a	92	67.273	Eptatretus_burgeri
ENSLACG00000015981	LSM12	99	90.155	ENSEASG00005010155	LSM12	99	90.155	Equus_asinus_asinus
ENSLACG00000015981	LSM12	99	90.155	ENSECAG00000009071	LSM12	99	90.909	Equus_caballus
ENSLACG00000015981	LSM12	78	91.447	ENSEEUG00000002419	-	99	91.447	Erinaceus_europaeus
ENSLACG00000015981	LSM12	100	85.204	ENSELUG00000015538	lsm12b	100	80.612	Esox_lucius
ENSLACG00000015981	LSM12	100	83.673	ENSELUG00000000256	-	100	83.673	Esox_lucius
ENSLACG00000015981	LSM12	99	90.155	ENSFCAG00000037021	LSM12	99	90.155	Felis_catus
ENSLACG00000015981	LSM12	81	84.756	ENSFDAG00000008954	LSM12	96	84.756	Fukomys_damarensis
ENSLACG00000015981	LSM12	100	86.224	ENSFHEG00000019913	lsm12b	100	86.224	Fundulus_heteroclitus
ENSLACG00000015981	LSM12	81	86.709	ENSGMOG00000015449	lsm12b	100	86.709	Gadus_morhua
ENSLACG00000015981	LSM12	78	90.789	ENSGALG00000039803	LSM12	99	90.789	Gallus_gallus
ENSLACG00000015981	LSM12	100	86.224	ENSGAFG00000011829	lsm12b	100	86.224	Gambusia_affinis
ENSLACG00000015981	LSM12	81	87.342	ENSGACG00000003428	lsm12b	100	87.342	Gasterosteus_aculeatus
ENSLACG00000015981	LSM12	100	89.175	ENSGAGG00000021965	LSM12	100	89.175	Gopherus_agassizii
ENSLACG00000015981	LSM12	99	90.155	ENSGGOG00000010589	-	99	90.909	Gorilla_gorilla
ENSLACG00000015981	LSM12	85	89.222	ENSHBUG00000007667	lsm12b	74	89.222	Haplochromis_burtoni
ENSLACG00000015981	LSM12	99	90.155	ENSHGLG00000011411	LSM12	99	90.909	Heterocephalus_glaber_female
ENSLACG00000015981	LSM12	78	91.447	ENSHGLG00100000241	LSM12	81	91.447	Heterocephalus_glaber_male
ENSLACG00000015981	LSM12	100	86.224	ENSHCOG00000002094	lsm12b	100	86.224	Hippocampus_comes
ENSLACG00000015981	LSM12	100	87.755	ENSIPUG00000014800	lsm12	100	87.755	Ictalurus_punctatus
ENSLACG00000015981	LSM12	99	77.320	ENSIPUG00000008936	lsm12a	99	77.320	Ictalurus_punctatus
ENSLACG00000015981	LSM12	99	90.155	ENSSTOG00000007403	LSM12	99	90.909	Ictidomys_tridecemlineatus
ENSLACG00000015981	LSM12	81	78.616	ENSJJAG00000014652	-	95	78.616	Jaculus_jaculus
ENSLACG00000015981	LSM12	99	89.119	ENSJJAG00000004364	-	99	90.000	Jaculus_jaculus
ENSLACG00000015981	LSM12	97	80.000	ENSJJAG00000011793	-	100	80.000	Jaculus_jaculus
ENSLACG00000015981	LSM12	85	88.623	ENSKMAG00000007704	lsm12b	56	88.623	Kryptolebias_marmoratus
ENSLACG00000015981	LSM12	100	88.776	ENSLBEG00000027999	lsm12b	100	88.776	Labrus_bergylta
ENSLACG00000015981	LSM12	100	88.265	ENSLOCG00000013079	lsm12b	99	88.265	Lepisosteus_oculatus
ENSLACG00000015981	LSM12	99	90.155	ENSLAFG00000005202	LSM12	99	90.155	Loxodonta_africana
ENSLACG00000015981	LSM12	99	90.155	ENSMFAG00000031376	LSM12	99	90.909	Macaca_fascicularis
ENSLACG00000015981	LSM12	65	77.011	ENSMMUG00000038408	-	100	77.011	Macaca_mulatta
ENSLACG00000015981	LSM12	99	90.155	ENSMMUG00000006804	LSM12	99	90.909	Macaca_mulatta
ENSLACG00000015981	LSM12	65	77.011	ENSMMUG00000042106	-	100	77.011	Macaca_mulatta
ENSLACG00000015981	LSM12	99	90.155	ENSMNEG00000030594	-	99	90.909	Macaca_nemestrina
ENSLACG00000015981	LSM12	99	90.155	ENSMLEG00000039934	LSM12	99	90.909	Mandrillus_leucophaeus
ENSLACG00000015981	LSM12	100	87.755	ENSMAMG00000004279	lsm12b	100	87.755	Mastacembelus_armatus
ENSLACG00000015981	LSM12	100	87.755	ENSMZEG00005005754	lsm12b	100	87.755	Maylandia_zebra
ENSLACG00000015981	LSM12	99	89.637	ENSMICG00000037219	LSM12	99	90.000	Microcebus_murinus
ENSLACG00000015981	LSM12	99	90.155	ENSMOCG00000019878	-	99	90.909	Microtus_ochrogaster
ENSLACG00000015981	LSM12	99	76.684	ENSMOCG00000017015	-	85	76.684	Microtus_ochrogaster
ENSLACG00000015981	LSM12	100	87.755	ENSMMOG00000020848	lsm12b	100	87.755	Mola_mola
ENSLACG00000015981	LSM12	99	88.542	ENSMALG00000007578	lsm12b	98	88.542	Monopterus_albus
ENSLACG00000015981	LSM12	99	89.637	MGP_CAROLIEiJ_G0017241	Lsm12	99	90.000	Mus_caroli
ENSLACG00000015981	LSM12	99	90.155	ENSMUSG00000020922	Lsm12	99	90.909	Mus_musculus
ENSLACG00000015981	LSM12	99	82.857	MGP_PahariEiJ_G0018371	Lsm12	99	90.909	Mus_pahari
ENSLACG00000015981	LSM12	99	89.637	MGP_SPRETEiJ_G0018084	Lsm12	98	91.667	Mus_spretus
ENSLACG00000015981	LSM12	99	90.674	ENSMLUG00000006391	LSM12	99	90.674	Myotis_lucifugus
ENSLACG00000015981	LSM12	99	90.155	ENSNGAG00000001870	Lsm12	99	90.909	Nannospalax_galili
ENSLACG00000015981	LSM12	98	63.636	ENSNGAG00000015429	-	98	63.636	Nannospalax_galili
ENSLACG00000015981	LSM12	100	87.755	ENSNBRG00000006266	lsm12b	100	87.755	Neolamprologus_brichardi
ENSLACG00000015981	LSM12	99	90.155	ENSNLEG00000005580	-	99	90.909	Nomascus_leucogenys
ENSLACG00000015981	LSM12	84	91.411	ENSMEUG00000007501	-	99	91.411	Notamacropus_eugenii
ENSLACG00000015981	LSM12	99	90.155	ENSOPRG00000008552	LSM12	99	90.155	Ochotona_princeps
ENSLACG00000015981	LSM12	100	81.026	ENSODEG00000007886	-	74	81.026	Octodon_degus
ENSLACG00000015981	LSM12	100	89.744	ENSODEG00000017998	-	100	89.744	Octodon_degus
ENSLACG00000015981	LSM12	100	87.755	ENSONIG00000007933	lsm12b	100	87.755	Oreochromis_niloticus
ENSLACG00000015981	LSM12	99	85.052	ENSOCUG00000021254	-	100	85.052	Oryctolagus_cuniculus
ENSLACG00000015981	LSM12	99	85.052	ENSOCUG00000027889	-	100	85.052	Oryctolagus_cuniculus
ENSLACG00000015981	LSM12	99	84.021	ENSOCUG00000024823	-	100	84.021	Oryctolagus_cuniculus
ENSLACG00000015981	LSM12	99	88.265	ENSOCUG00000008566	-	99	88.265	Oryctolagus_cuniculus
ENSLACG00000015981	LSM12	100	87.755	ENSORLG00000011310	lsm12b	100	87.755	Oryzias_latipes
ENSLACG00000015981	LSM12	100	87.755	ENSORLG00020002060	lsm12b	92	87.755	Oryzias_latipes_hni
ENSLACG00000015981	LSM12	100	87.755	ENSORLG00015001647	lsm12b	92	87.755	Oryzias_latipes_hsok
ENSLACG00000015981	LSM12	100	88.776	ENSOMEG00000006184	lsm12b	92	88.776	Oryzias_melastigma
ENSLACG00000015981	LSM12	99	89.637	ENSOGAG00000010489	LSM12	99	89.637	Otolemur_garnettii
ENSLACG00000015981	LSM12	99	86.935	ENSOARG00000006589	LSM12	99	86.935	Ovis_aries
ENSLACG00000015981	LSM12	99	80.311	ENSPPAG00000034974	-	99	80.311	Pan_paniscus
ENSLACG00000015981	LSM12	99	90.155	ENSPPRG00000023420	LSM12	99	90.155	Panthera_pardus
ENSLACG00000015981	LSM12	78	91.447	ENSPTIG00000012704	-	81	91.447	Panthera_tigris_altaica
ENSLACG00000015981	LSM12	72	89.091	ENSPTIG00000014850	-	99	89.091	Panthera_tigris_altaica
ENSLACG00000015981	LSM12	99	90.155	ENSPTRG00000009261	LSM12	99	90.909	Pan_troglodytes
ENSLACG00000015981	LSM12	99	90.155	ENSPANG00000021315	-	99	90.909	Papio_anubis
ENSLACG00000015981	LSM12	99	78.646	ENSPKIG00000017932	-	98	78.646	Paramormyrops_kingsleyae
ENSLACG00000015981	LSM12	100	87.755	ENSPKIG00000021058	lsm12b	100	87.755	Paramormyrops_kingsleyae
ENSLACG00000015981	LSM12	100	88.265	ENSPMGG00000021344	lsm12b	100	88.265	Periophthalmus_magnuspinnatus
ENSLACG00000015981	LSM12	99	90.155	ENSPEMG00000012199	Lsm12	99	90.909	Peromyscus_maniculatus_bairdii
ENSLACG00000015981	LSM12	89	68.786	ENSPMAG00000005461	lsm12a	99	68.786	Petromyzon_marinus
ENSLACG00000015981	LSM12	99	90.674	ENSPCIG00000020244	LSM12	99	90.674	Phascolarctos_cinereus
ENSLACG00000015981	LSM12	100	85.204	ENSPFOG00000015930	lsm12b	100	85.204	Poecilia_formosa
ENSLACG00000015981	LSM12	100	85.204	ENSPLAG00000021089	lsm12b	100	85.204	Poecilia_latipinna
ENSLACG00000015981	LSM12	100	85.204	ENSPMEG00000012961	lsm12b	100	85.204	Poecilia_mexicana
ENSLACG00000015981	LSM12	88	87.135	ENSPREG00000010236	lsm12b	95	87.135	Poecilia_reticulata
ENSLACG00000015981	LSM12	99	90.155	ENSPPYG00000008344	LSM12	99	90.155	Pongo_abelii
ENSLACG00000015981	LSM12	82	91.824	ENSPCAG00000008790	LSM12	100	91.824	Procavia_capensis
ENSLACG00000015981	LSM12	99	90.155	ENSPCOG00000027951	LSM12	99	90.909	Propithecus_coquereli
ENSLACG00000015981	LSM12	99	90.674	ENSPVAG00000013706	LSM12	99	90.674	Pteropus_vampyrus
ENSLACG00000015981	LSM12	100	87.755	ENSPNYG00000003386	lsm12b	100	87.755	Pundamilia_nyererei
ENSLACG00000015981	LSM12	100	81.633	ENSPNAG00000018435	lsm12a	100	81.633	Pygocentrus_nattereri
ENSLACG00000015981	LSM12	100	86.224	ENSPNAG00000004186	lsm12b	100	86.224	Pygocentrus_nattereri
ENSLACG00000015981	LSM12	99	90.155	ENSRNOG00000020894	Lsm12	99	90.155	Rattus_norvegicus
ENSLACG00000015981	LSM12	99	90.155	ENSRBIG00000027910	LSM12	99	90.909	Rhinopithecus_bieti
ENSLACG00000015981	LSM12	99	90.155	ENSRROG00000045530	-	99	90.909	Rhinopithecus_roxellana
ENSLACG00000015981	LSM12	100	55.385	ENSRROG00000000537	-	100	55.385	Rhinopithecus_roxellana
ENSLACG00000015981	LSM12	99	90.155	ENSSBOG00000025310	LSM12	99	90.909	Saimiri_boliviensis_boliviensis
ENSLACG00000015981	LSM12	81	89.873	ENSSHAG00000014914	LSM12	100	89.873	Sarcophilus_harrisii
ENSLACG00000015981	LSM12	100	86.224	ENSSFOG00015020392	lsm12a	100	86.224	Scleropages_formosus
ENSLACG00000015981	LSM12	100	86.735	ENSSFOG00015009612	lsm12	100	86.735	Scleropages_formosus
ENSLACG00000015981	LSM12	100	87.755	ENSSMAG00000008089	lsm12b	100	87.755	Scophthalmus_maximus
ENSLACG00000015981	LSM12	100	88.776	ENSSDUG00000012711	lsm12b	100	88.776	Seriola_dumerili
ENSLACG00000015981	LSM12	100	88.776	ENSSLDG00000007404	lsm12b	100	88.776	Seriola_lalandi_dorsalis
ENSLACG00000015981	LSM12	78	90.789	ENSSARG00000005537	LSM12	99	90.789	Sorex_araneus
ENSLACG00000015981	LSM12	100	90.722	ENSSPUG00000011984	LSM12	100	90.722	Sphenodon_punctatus
ENSLACG00000015981	LSM12	100	88.265	ENSSPAG00000017058	lsm12b	100	88.265	Stegastes_partitus
ENSLACG00000015981	LSM12	99	90.155	ENSSSCG00000032394	LSM12	99	90.155	Sus_scrofa
ENSLACG00000015981	LSM12	100	86.735	ENSTRUG00000007121	lsm12b	100	86.735	Takifugu_rubripes
ENSLACG00000015981	LSM12	100	86.735	ENSTNIG00000014436	lsm12b	100	86.735	Tetraodon_nigroviridis
ENSLACG00000015981	LSM12	99	89.637	ENSTBEG00000012523	-	99	89.637	Tupaia_belangeri
ENSLACG00000015981	LSM12	99	87.565	ENSTBEG00000012392	-	99	87.565	Tupaia_belangeri
ENSLACG00000015981	LSM12	99	90.155	ENSTTRG00000010433	LSM12	99	90.155	Tursiops_truncatus
ENSLACG00000015981	LSM12	99	90.155	ENSUAMG00000006313	LSM12	99	90.155	Ursus_americanus
ENSLACG00000015981	LSM12	78	91.447	ENSUMAG00000012987	LSM12	86	91.447	Ursus_maritimus
ENSLACG00000015981	LSM12	99	84.456	ENSVPAG00000011145	LSM12	99	84.456	Vicugna_pacos
ENSLACG00000015981	LSM12	99	90.155	ENSVVUG00000017581	LSM12	99	90.155	Vulpes_vulpes
ENSLACG00000015981	LSM12	82	65.000	ENSXETG00000003371	lsm12	77	65.000	Xenopus_tropicalis
ENSLACG00000015981	LSM12	100	86.224	ENSXCOG00000003994	lsm12b	100	86.224	Xiphophorus_couchianus
ENSLACG00000015981	LSM12	100	86.224	ENSXMAG00000020950	lsm12b	100	86.224	Xiphophorus_maculatus