EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Description

Ensembl ID: ENSLACG00000016012 (Gene tree)
Gene ID: 102348488
Gene Symbol: TSPAN17
Alias: FBX23|FBXO23|TM4SF17
Full Name: eukaryotic translation initiation factor 4E family member 1B
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 55493 bases
Position: chrJH126722.1:1428337-1483829
Accession: 102348222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018177	IF4E	PF01652.18	2.7e-53	1	1
ENSLACP00000023477	IF4E	PF01652.18	1.7e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000018397	TSPAN17-203	813	XM_005993382	ENSLACP00000018265	270 (aa)	XP_005993444	H3B8P4
ENSLACT00000018309	TSPAN17-202	657	XM_005993381	ENSLACP00000018177	218 (aa)	XP_005993443	H3B8F6
ENSLACT00000025432	TSPAN17-201	906	-	ENSLACP00000023477	207 (aa)	-	M3XL71

Gene Model

Click here to download ENSLACG00000016012's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03013	RNA transport	KEGG
lcm04150	mTOR signaling pathway	KEGG
lcm04910	Insulin signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016012's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000016012	TSPAN17	97	74.057	ENSLACG00000008977	EIF4E	97	74.057
ENSLACG00000016012	TSPAN17	92	52.709	ENSLACG00000015230	eif4e1c	93	52.709
ENSLACG00000016012	TSPAN17	83	32.086	ENSLACG00000015940	EIF4E2	90	31.019