EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000016114 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 3789 bases
Position: chrJH126729.1:1458397-1462185
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018293	RVT_1	PF00078.27	4.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000018425	-	3303	-	ENSLACP00000018293	1101 (aa)	-	H3B8S2

Gene Model

Click here to download ENSLACG00000016114's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016114's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000016114	-	69	56.440	ENSLACG00000006151	-	90	56.440
ENSLACG00000016114	-	59	33.333	ENSLACG00000008450	-	92	33.333
ENSLACG00000016114	-	67	40.860	ENSLACG00000010043	-	92	40.860
ENSLACG00000016114	-	58	37.222	ENSLACG00000009524	-	72	38.056
ENSLACG00000016114	-	67	32.558	ENSLACG00000005710	-	61	32.558
ENSLACG00000016114	-	53	85.238	ENSLACG00000009347	-	88	85.238
ENSLACG00000016114	-	62	44.811	ENSLACG00000015186	-	87	44.811
ENSLACG00000016114	-	54	39.831	ENSLACG00000018782	-	81	39.831
ENSLACG00000016114	-	60	64.726	ENSLACG00000011297	-	85	64.726

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016114	-	59	46.736	ENSACLG00000023495	-	54	46.736	Astatotilapia_calliptera
ENSLACG00000016114	-	53	43.121	ENSACLG00000020185	-	86	43.121	Astatotilapia_calliptera
ENSLACG00000016114	-	50	31.552	ENSAMXG00000037637	-	90	31.552	Astyanax_mexicanus
ENSLACG00000016114	-	57	30.428	ENSMALG00000004164	-	99	30.428	Monopterus_albus
ENSLACG00000016114	-	53	47.342	ENSMALG00000014073	-	81	47.342	Monopterus_albus
ENSLACG00000016114	-	51	50.534	ENSORLG00000021828	-	68	50.534	Oryzias_latipes
ENSLACG00000016114	-	53	42.617	ENSORLG00000028047	-	91	42.617	Oryzias_latipes