EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000016121 (Gene tree)
Gene ID: 102346175
Gene Symbol: EFL1
Alias: EFTUD1|FAM42A|FLJ13119|HsT19294|RIA1
Full Name: elongation factor like GTPase 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 169020 bases
Position: chrJH126608.1:1460000-1629019
Accession: 102346175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018302	GTP_EFTU	PF00009.27	1.2e-60	1	1
ENSLACP00000022369	GTP_EFTU	PF00009.27	1.2e-60	1	1
ENSLACP00000018302	GTP_EFTU_D2	PF03144.25	6.6e-08	1	1
ENSLACP00000022369	GTP_EFTU_D2	PF03144.25	6.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000018434	EFL1-201	6919	XM_005989602	ENSLACP00000018302	1136 (aa)	XP_014340293	H3B8T1
ENSLACT00000025251	EFL1-202	4635	-	ENSLACP00000022369	1136 (aa)	XP_014340293	H3B8T1

Gene Model

Click here to download ENSLACG00000016121's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016121's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000016121	EFL1	84	34.965	ENSLACG00000012918	EFTUD2	84	34.965
ENSLACG00000016121	EFL1	84	40.000	ENSLACG00000011124	-	96	40.000
ENSLACG00000016121	EFL1	81	41.739	ENSLACG00000004710	-	95	41.739

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016121	EFL1	100	71.941	ENSG00000140598	EFL1	98	78.273	Homo_sapiens
ENSLACG00000016121	EFL1	100	72.696	ENSAPOG00000000188	efl1	100	72.696	Acanthochromis_polyacanthus
ENSLACG00000016121	EFL1	100	71.867	ENSAMEG00000006031	EFL1	100	71.867	Ailuropoda_melanoleuca
ENSLACG00000016121	EFL1	100	72.101	ENSACIG00000017802	efl1	100	72.188	Amphilophus_citrinellus
ENSLACG00000016121	EFL1	100	71.990	ENSAOCG00000023933	efl1	100	72.164	Amphiprion_ocellaris
ENSLACG00000016121	EFL1	100	73.130	ENSAPEG00000000262	efl1	100	73.130	Amphiprion_percula
ENSLACG00000016121	EFL1	100	72.537	ENSATEG00000012373	efl1	100	72.498	Anabas_testudineus
ENSLACG00000016121	EFL1	99	75.548	ENSAPLG00000011147	EFL1	99	75.548	Anas_platyrhynchos
ENSLACG00000016121	EFL1	99	71.667	ENSACAG00000011040	EFL1	99	71.667	Anolis_carolinensis
ENSLACG00000016121	EFL1	100	71.804	ENSANAG00000027459	EFL1	100	71.804	Aotus_nancymaae
ENSLACG00000016121	EFL1	100	71.616	ENSACLG00000025780	efl1	100	71.616	Astatotilapia_calliptera
ENSLACG00000016121	EFL1	100	73.264	ENSAMXG00000019529	efl1	100	73.345	Astyanax_mexicanus
ENSLACG00000016121	EFL1	100	72.290	ENSBTAG00000003410	EFL1	100	72.290	Bos_taurus
ENSLACG00000016121	EFL1	86	51.807	WBGene00010732	K10C3.5	93	58.559	Caenorhabditis_elegans
ENSLACG00000016121	EFL1	84	97.619	ENSCJAG00000015607	-	93	97.619	Callithrix_jacchus
ENSLACG00000016121	EFL1	100	71.604	ENSCAFG00000013671	EFL1	100	71.604	Canis_familiaris
ENSLACG00000016121	EFL1	100	72.378	ENSCHIG00000001883	EFL1	100	72.378	Capra_hircus
ENSLACG00000016121	EFL1	100	71.878	ENSTSYG00000000348	EFL1	100	71.878	Carlito_syrichta
ENSLACG00000016121	EFL1	100	60.995	ENSCAPG00000017944	EFL1	100	60.995	Cavia_aperea
ENSLACG00000016121	EFL1	100	71.691	ENSCPOG00000001924	EFL1	100	71.691	Cavia_porcellus
ENSLACG00000016121	EFL1	100	71.629	ENSCCAG00000034450	EFL1	100	71.629	Cebus_capucinus
ENSLACG00000016121	EFL1	100	71.329	ENSCATG00000031678	-	100	71.329	Cercocebus_atys
ENSLACG00000016121	EFL1	100	72.042	ENSCLAG00000010155	EFL1	100	72.042	Chinchilla_lanigera
ENSLACG00000016121	EFL1	100	71.528	ENSCSAG00000015165	EFL1	100	71.528	Chlorocebus_sabaeus
ENSLACG00000016121	EFL1	73	69.856	ENSCHOG00000014029	EFL1	78	69.856	Choloepus_hoffmanni
ENSLACG00000016121	EFL1	99	78.634	ENSCPBG00000017638	EFL1	99	78.634	Chrysemys_picta_bellii
ENSLACG00000016121	EFL1	82	73.913	ENSCSAVG00000001787	-	99	73.913	Ciona_savignyi
ENSLACG00000016121	EFL1	100	71.503	ENSCANG00000038093	EFL1	100	71.503	Colobus_angolensis_palliatus
ENSLACG00000016121	EFL1	100	68.536	ENSCGRG00001010826	Efl1	100	68.536	Cricetulus_griseus_chok1gshd
ENSLACG00000016121	EFL1	100	71.341	ENSCGRG00000003273	Efl1	100	71.341	Cricetulus_griseus_crigri
ENSLACG00000016121	EFL1	99	67.483	ENSCSEG00000005856	efl1	99	67.832	Cynoglossus_semilaevis
ENSLACG00000016121	EFL1	93	68.972	ENSCVAG00000011863	efl1	95	68.972	Cyprinodon_variegatus
ENSLACG00000016121	EFL1	100	73.689	ENSDARG00000079672	efl1	98	73.947	Danio_rerio
ENSLACG00000016121	EFL1	100	72.242	ENSDNOG00000006097	EFL1	100	72.242	Dasypus_novemcinctus
ENSLACG00000016121	EFL1	100	70.691	ENSDORG00000000719	Efl1	100	70.691	Dipodomys_ordii
ENSLACG00000016121	EFL1	99	43.380	FBgn0053158	CG33158	99	43.403	Drosophila_melanogaster
ENSLACG00000016121	EFL1	93	64.717	ENSETEG00000004309	EFL1	99	64.717	Echinops_telfairi
ENSLACG00000016121	EFL1	83	71.190	ENSEBUG00000010738	efl1	99	71.190	Eptatretus_burgeri
ENSLACG00000016121	EFL1	100	70.954	ENSEASG00005007108	EFL1	100	70.954	Equus_asinus_asinus
ENSLACG00000016121	EFL1	95	71.009	ENSECAG00000016354	EFL1	99	71.009	Equus_caballus
ENSLACG00000016121	EFL1	70	75.000	ENSEEUG00000006326	EFL1	74	75.000	Erinaceus_europaeus
ENSLACG00000016121	EFL1	100	67.502	ENSELUG00000002520	efl1	99	77.966	Esox_lucius
ENSLACG00000016121	EFL1	100	72.217	ENSFCAG00000007741	EFL1	100	72.217	Felis_catus
ENSLACG00000016121	EFL1	100	76.399	ENSFALG00000011103	EFL1	100	76.399	Ficedula_albicollis
ENSLACG00000016121	EFL1	100	71.253	ENSFDAG00000009023	EFL1	100	71.253	Fukomys_damarensis
ENSLACG00000016121	EFL1	100	70.044	ENSFHEG00000017795	efl1	100	70.332	Fundulus_heteroclitus
ENSLACG00000016121	EFL1	94	84.916	ENSGMOG00000005041	efl1	97	84.916	Gadus_morhua
ENSLACG00000016121	EFL1	100	75.766	ENSGALG00000006225	EFL1	100	75.766	Gallus_gallus
ENSLACG00000016121	EFL1	100	68.564	ENSGACG00000012495	efl1	100	68.651	Gasterosteus_aculeatus
ENSLACG00000016121	EFL1	100	78.177	ENSGAGG00000022841	EFL1	100	78.177	Gopherus_agassizii
ENSLACG00000016121	EFL1	97	66.757	ENSGGOG00000005017	EFL1	100	66.757	Gorilla_gorilla
ENSLACG00000016121	EFL1	100	71.429	ENSHBUG00000022667	efl1	100	71.603	Haplochromis_burtoni
ENSLACG00000016121	EFL1	100	68.186	ENSHGLG00000011798	EFL1	100	68.799	Heterocephalus_glaber_female
ENSLACG00000016121	EFL1	100	70.815	ENSHGLG00100010319	EFTUD1	100	81.928	Heterocephalus_glaber_male
ENSLACG00000016121	EFL1	100	70.557	ENSHCOG00000007325	efl1	100	70.557	Hippocampus_comes
ENSLACG00000016121	EFL1	100	71.804	ENSIPUG00000023360	EFTUD1	100	71.804	Ictalurus_punctatus
ENSLACG00000016121	EFL1	100	68.887	ENSSTOG00000022945	EFL1	100	68.887	Ictidomys_tridecemlineatus
ENSLACG00000016121	EFL1	100	71.629	ENSJJAG00000018598	Efl1	100	71.629	Jaculus_jaculus
ENSLACG00000016121	EFL1	100	72.426	ENSLBEG00000015269	efl1	100	72.426	Labrus_bergylta
ENSLACG00000016121	EFL1	100	75.000	ENSLOCG00000012862	efl1	99	75.044	Lepisosteus_oculatus
ENSLACG00000016121	EFL1	100	70.017	ENSLAFG00000012504	EFL1	100	70.017	Loxodonta_africana
ENSLACG00000016121	EFL1	100	71.591	ENSMFAG00000032657	-	100	71.591	Macaca_fascicularis
ENSLACG00000016121	EFL1	100	69.525	ENSMMUG00000023353	EFL1	100	69.525	Macaca_mulatta
ENSLACG00000016121	EFL1	100	71.503	ENSMNEG00000041671	-	99	71.503	Macaca_nemestrina
ENSLACG00000016121	EFL1	100	71.503	ENSMLEG00000033735	EFL1	100	71.503	Mandrillus_leucophaeus
ENSLACG00000016121	EFL1	100	72.624	ENSMAMG00000011336	efl1	100	72.624	Mastacembelus_armatus
ENSLACG00000016121	EFL1	100	71.491	ENSMZEG00005003012	efl1	100	71.665	Maylandia_zebra
ENSLACG00000016121	EFL1	100	75.763	ENSMGAG00000007991	EFL1	100	75.763	Meleagris_gallopavo
ENSLACG00000016121	EFL1	100	71.078	ENSMAUG00000010709	Efl1	100	71.078	Mesocricetus_auratus
ENSLACG00000016121	EFL1	100	71.954	ENSMICG00000027853	EFL1	94	78.250	Microcebus_murinus
ENSLACG00000016121	EFL1	100	70.753	ENSMOCG00000007470	Efl1	100	70.753	Microtus_ochrogaster
ENSLACG00000016121	EFL1	100	66.754	ENSMMOG00000015370	efl1	100	66.754	Mola_mola
ENSLACG00000016121	EFL1	100	73.107	ENSMODG00000019386	EFL1	100	73.107	Monodelphis_domestica
ENSLACG00000016121	EFL1	100	71.924	ENSMALG00000018810	efl1	100	71.924	Monopterus_albus
ENSLACG00000016121	EFL1	100	71.429	MGP_CAROLIEiJ_G0029936	Efl1	99	81.070	Mus_caroli
ENSLACG00000016121	EFL1	100	71.341	ENSMUSG00000038563	Efl1	100	80.769	Mus_musculus
ENSLACG00000016121	EFL1	100	71.278	MGP_PahariEiJ_G0013157	Efl1	100	80.342	Mus_pahari
ENSLACG00000016121	EFL1	100	75.926	MGP_SPRETEiJ_G0031038	Efl1	99	75.926	Mus_spretus
ENSLACG00000016121	EFL1	100	70.341	ENSMPUG00000015494	EFL1	100	70.516	Mustela_putorius_furo
ENSLACG00000016121	EFL1	100	71.429	ENSNGAG00000017740	Efl1	100	71.429	Nannospalax_galili
ENSLACG00000016121	EFL1	93	70.943	ENSNLEG00000010679	EFL1	99	70.943	Nomascus_leucogenys
ENSLACG00000016121	EFL1	61	77.358	ENSMEUG00000012049	-	68	77.358	Notamacropus_eugenii
ENSLACG00000016121	EFL1	63	70.732	ENSOPRG00000012488	-	63	70.732	Ochotona_princeps
ENSLACG00000016121	EFL1	100	70.815	ENSODEG00000016193	EFL1	89	81.928	Octodon_degus
ENSLACG00000016121	EFL1	100	71.777	ENSONIG00000003394	efl1	100	71.864	Oreochromis_niloticus
ENSLACG00000016121	EFL1	100	71.541	ENSOCUG00000012163	EFL1	100	71.541	Oryctolagus_cuniculus
ENSLACG00000016121	EFL1	63	63.136	ENSORLG00000020390	efl1	100	63.411	Oryzias_latipes
ENSLACG00000016121	EFL1	96	73.950	ENSORLG00015012031	efl1	100	68.384	Oryzias_latipes_hsok
ENSLACG00000016121	EFL1	100	68.881	ENSOMEG00000022784	efl1	100	68.969	Oryzias_melastigma
ENSLACG00000016121	EFL1	100	72.314	ENSOARG00000014452	EFL1	100	72.314	Ovis_aries
ENSLACG00000016121	EFL1	100	67.367	ENSPPAG00000039672	EFL1	100	67.367	Pan_paniscus
ENSLACG00000016121	EFL1	100	72.217	ENSPPRG00000002193	EFL1	100	72.305	Panthera_pardus
ENSLACG00000016121	EFL1	100	72.042	ENSPTIG00000007053	EFL1	100	72.130	Panthera_tigris_altaica
ENSLACG00000016121	EFL1	100	71.366	ENSPTRG00000007374	EFL1	100	71.366	Pan_troglodytes
ENSLACG00000016121	EFL1	100	71.503	ENSPANG00000015635	-	98	71.503	Papio_anubis
ENSLACG00000016121	EFL1	99	70.764	ENSPKIG00000018456	efl1	99	70.852	Paramormyrops_kingsleyae
ENSLACG00000016121	EFL1	100	77.496	ENSPSIG00000007790	EFL1	100	77.496	Pelodiscus_sinensis
ENSLACG00000016121	EFL1	93	65.527	ENSPMAG00000002026	efl1	100	65.527	Petromyzon_marinus
ENSLACG00000016121	EFL1	100	73.928	ENSPCIG00000004372	EFL1	100	73.928	Phascolarctos_cinereus
ENSLACG00000016121	EFL1	100	69.157	ENSPFOG00000018687	efl1	100	69.679	Poecilia_formosa
ENSLACG00000016121	EFL1	100	69.244	ENSPLAG00000001988	efl1	100	69.765	Poecilia_latipinna
ENSLACG00000016121	EFL1	100	69.258	ENSPMEG00000000402	efl1	100	69.782	Poecilia_mexicana
ENSLACG00000016121	EFL1	100	70.096	ENSPREG00000022085	efl1	100	70.445	Poecilia_reticulata
ENSLACG00000016121	EFL1	100	72.028	ENSPPYG00000006724	EFL1	100	72.028	Pongo_abelii
ENSLACG00000016121	EFL1	100	71.654	ENSPVAG00000003189	EFL1	100	71.654	Pteropus_vampyrus
ENSLACG00000016121	EFL1	100	64.454	ENSPNYG00000019406	efl1	100	64.921	Pundamilia_nyererei
ENSLACG00000016121	EFL1	100	74.628	ENSPNAG00000012104	efl1	100	74.628	Pygocentrus_nattereri
ENSLACG00000016121	EFL1	100	71.429	ENSRNOG00000032723	Efl1	100	71.429	Rattus_norvegicus
ENSLACG00000016121	EFL1	100	71.479	ENSRBIG00000040576	EFL1	100	71.479	Rhinopithecus_bieti
ENSLACG00000016121	EFL1	100	69.244	ENSRROG00000031475	EFL1	100	69.244	Rhinopithecus_roxellana
ENSLACG00000016121	EFL1	95	49.565	YNL163C	RIA1	88	49.565	Saccharomyces_cerevisiae
ENSLACG00000016121	EFL1	100	71.716	ENSSBOG00000018280	EFL1	100	71.716	Saimiri_boliviensis_boliviensis
ENSLACG00000016121	EFL1	100	69.974	ENSSHAG00000018863	EFL1	100	69.974	Sarcophilus_harrisii
ENSLACG00000016121	EFL1	100	74.068	ENSSFOG00015016244	efl1	100	74.068	Scleropages_formosus
ENSLACG00000016121	EFL1	100	70.165	ENSSMAG00000016928	efl1	100	70.685	Scophthalmus_maximus
ENSLACG00000016121	EFL1	100	72.101	ENSSDUG00000013271	efl1	100	72.101	Seriola_dumerili
ENSLACG00000016121	EFL1	100	72.363	ENSSLDG00000014655	efl1	100	72.363	Seriola_lalandi_dorsalis
ENSLACG00000016121	EFL1	100	76.224	ENSSPUG00000000941	EFL1	100	76.224	Sphenodon_punctatus
ENSLACG00000016121	EFL1	100	73.067	ENSSPAG00000011885	efl1	100	73.067	Stegastes_partitus
ENSLACG00000016121	EFL1	100	72.353	ENSSSCG00000001792	EFL1	100	72.353	Sus_scrofa
ENSLACG00000016121	EFL1	100	76.295	ENSTGUG00000007850	EFL1	100	76.295	Taeniopygia_guttata
ENSLACG00000016121	EFL1	100	62.597	ENSTNIG00000003399	efl1	100	62.522	Tetraodon_nigroviridis
ENSLACG00000016121	EFL1	73	81.366	ENSTBEG00000011804	EFL1	78	81.366	Tupaia_belangeri
ENSLACG00000016121	EFL1	100	71.716	ENSTTRG00000011243	EFL1	100	71.716	Tursiops_truncatus
ENSLACG00000016121	EFL1	100	71.691	ENSUAMG00000022106	EFL1	100	71.691	Ursus_americanus
ENSLACG00000016121	EFL1	100	71.954	ENSUMAG00000010303	EFL1	100	71.954	Ursus_maritimus
ENSLACG00000016121	EFL1	94	83.128	ENSVPAG00000005735	EFL1	94	83.128	Vicugna_pacos
ENSLACG00000016121	EFL1	100	71.691	ENSVVUG00000004967	EFL1	100	71.691	Vulpes_vulpes
ENSLACG00000016121	EFL1	100	74.978	ENSXETG00000015701	EFL1	100	74.978	Xenopus_tropicalis
ENSLACG00000016121	EFL1	100	69.660	ENSXMAG00000023705	efl1	100	70.270	Xiphophorus_maculatus