EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000016157 (Gene tree)
Gene ID: 102358129
Gene Symbol: STAU1
Alias: PPP1R150|STAU
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 45888 bases
Position: chrJH126675.1:1470696-1516583
Accession: 102358129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018344	dsrm	PF00035.26	4.4e-48	1	4
ENSLACP00000018344	dsrm	PF00035.26	4.4e-48	2	4
ENSLACP00000018344	dsrm	PF00035.26	4.4e-48	3	4
ENSLACP00000018344	dsrm	PF00035.26	4.4e-48	4	4
ENSLACP00000018345	dsrm	PF00035.26	9.9e-44	1	4
ENSLACP00000018345	dsrm	PF00035.26	9.9e-44	2	4
ENSLACP00000018345	dsrm	PF00035.26	9.9e-44	3	4
ENSLACP00000018345	dsrm	PF00035.26	9.9e-44	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000018478	STAU1-202	2169	-	ENSLACP00000018345	723 (aa)	-	H3B8X4
ENSLACT00000018477	STAU1-201	2423	XM_005992044	ENSLACP00000018344	715 (aa)	-	H3B8X3

Gene Model

Click here to download ENSLACG00000016157's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016157's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000016157	STAU1	92	51.744	ENSLACG00000006873	STAU2	99	53.717

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016157	STAU1	96	83.333	ENSG00000124214	STAU1	99	83.333	Homo_sapiens
ENSLACG00000016157	STAU1	96	72.183	ENSAPOG00000017260	stau1	100	70.386	Acanthochromis_polyacanthus
ENSLACG00000016157	STAU1	96	79.685	ENSAMEG00000013681	STAU1	95	81.684	Ailuropoda_melanoleuca
ENSLACG00000016157	STAU1	97	73.381	ENSACIG00000015918	stau1	98	73.420	Amphilophus_citrinellus
ENSLACG00000016157	STAU1	97	74.069	ENSAOCG00000012224	stau1	98	74.069	Amphiprion_ocellaris
ENSLACG00000016157	STAU1	97	74.212	ENSAPEG00000012308	stau1	98	74.212	Amphiprion_percula
ENSLACG00000016157	STAU1	97	73.496	ENSATEG00000024600	stau1	99	74.047	Anabas_testudineus
ENSLACG00000016157	STAU1	97	83.754	ENSAPLG00000010527	STAU1	98	83.754	Anas_platyrhynchos
ENSLACG00000016157	STAU1	97	84.384	ENSACAG00000015909	STAU1	98	84.384	Anolis_carolinensis
ENSLACG00000016157	STAU1	96	82.364	ENSANAG00000032714	STAU1	99	82.364	Aotus_nancymaae
ENSLACG00000016157	STAU1	97	72.701	ENSACLG00000012270	stau1	98	72.701	Astatotilapia_calliptera
ENSLACG00000016157	STAU1	76	73.481	ENSAMXG00000016812	stau1	98	77.603	Astyanax_mexicanus
ENSLACG00000016157	STAU1	96	82.157	ENSBTAG00000000241	STAU1	99	82.157	Bos_taurus
ENSLACG00000016157	STAU1	96	83.333	ENSCJAG00000016233	STAU1	99	83.333	Callithrix_jacchus
ENSLACG00000016157	STAU1	96	83.725	ENSCAFG00000011347	STAU1	99	82.840	Canis_familiaris
ENSLACG00000016157	STAU1	94	82.840	ENSCAFG00020017123	STAU1	99	82.895	Canis_lupus_dingo
ENSLACG00000016157	STAU1	96	82.157	ENSCHIG00000001799	-	99	82.157	Capra_hircus
ENSLACG00000016157	STAU1	96	81.176	ENSTSYG00000036179	-	99	81.176	Carlito_syrichta
ENSLACG00000016157	STAU1	71	78.614	ENSCAPG00000017041	STAU1	99	79.879	Cavia_aperea
ENSLACG00000016157	STAU1	70	77.336	ENSCPOG00000005566	STAU1	99	78.586	Cavia_porcellus
ENSLACG00000016157	STAU1	96	82.558	ENSCCAG00000034339	STAU1	99	82.558	Cebus_capucinus
ENSLACG00000016157	STAU1	96	83.529	ENSCATG00000028474	STAU1	99	83.529	Cercocebus_atys
ENSLACG00000016157	STAU1	70	81.113	ENSCLAG00000006516	-	99	82.424	Chinchilla_lanigera
ENSLACG00000016157	STAU1	70	67.262	ENSCLAG00000002784	-	99	68.145	Chinchilla_lanigera
ENSLACG00000016157	STAU1	71	82.376	ENSCSAG00000014986	STAU1	99	83.702	Chlorocebus_sabaeus
ENSLACG00000016157	STAU1	96	83.953	ENSCHOG00000001511	STAU1	99	83.953	Choloepus_hoffmanni
ENSLACG00000016157	STAU1	97	86.246	ENSCPBG00000026741	STAU1	98	86.246	Chrysemys_picta_bellii
ENSLACG00000016157	STAU1	96	83.333	ENSCANG00000039220	STAU1	99	83.333	Colobus_angolensis_palliatus
ENSLACG00000016157	STAU1	70	75.944	ENSCGRG00001013453	Stau1	99	77.172	Cricetulus_griseus_chok1gshd
ENSLACG00000016157	STAU1	70	75.944	ENSCGRG00000007216	Stau1	99	77.172	Cricetulus_griseus_crigri
ENSLACG00000016157	STAU1	99	66.667	ENSCSEG00000000792	stau1	99	67.036	Cynoglossus_semilaevis
ENSLACG00000016157	STAU1	95	74.901	ENSCVAG00000005906	stau1	99	74.951	Cyprinodon_variegatus
ENSLACG00000016157	STAU1	99	71.016	ENSDARG00000044182	stau1	98	75.274	Danio_rerio
ENSLACG00000016157	STAU1	96	83.953	ENSDNOG00000014933	STAU1	98	83.953	Dasypus_novemcinctus
ENSLACG00000016157	STAU1	70	78.471	ENSDORG00000030220	Stau1	99	79.755	Dipodomys_ordii
ENSLACG00000016157	STAU1	82	81.333	ENSETEG00000018235	STAU1	87	81.333	Echinops_telfairi
ENSLACG00000016157	STAU1	96	82.946	ENSEASG00005023343	STAU1	100	82.284	Equus_asinus_asinus
ENSLACG00000016157	STAU1	96	84.118	ENSECAG00000012894	STAU1	99	84.118	Equus_caballus
ENSLACG00000016157	STAU1	64	85.714	ENSEEUG00000014344	STAU1	80	85.714	Erinaceus_europaeus
ENSLACG00000016157	STAU1	93	74.156	ENSELUG00000002529	stau1	97	75.430	Esox_lucius
ENSLACG00000016157	STAU1	96	83.922	ENSFCAG00000001447	STAU1	99	83.922	Felis_catus
ENSLACG00000016157	STAU1	97	85.694	ENSFALG00000012940	STAU1	98	85.694	Ficedula_albicollis
ENSLACG00000016157	STAU1	71	63.043	ENSFDAG00000020837	-	99	64.056	Fukomys_damarensis
ENSLACG00000016157	STAU1	70	80.318	ENSFDAG00000014119	-	99	81.616	Fukomys_damarensis
ENSLACG00000016157	STAU1	97	73.391	ENSFHEG00000013517	stau1	99	76.517	Fundulus_heteroclitus
ENSLACG00000016157	STAU1	97	63.916	ENSGMOG00000016850	stau1	98	63.916	Gadus_morhua
ENSLACG00000016157	STAU1	97	86.272	ENSGALG00000004736	STAU1	98	86.272	Gallus_gallus
ENSLACG00000016157	STAU1	96	72.468	ENSGAFG00000010437	stau1	98	73.104	Gambusia_affinis
ENSLACG00000016157	STAU1	97	72.806	ENSGACG00000001352	stau1	98	72.806	Gasterosteus_aculeatus
ENSLACG00000016157	STAU1	97	86.705	ENSGAGG00000009825	STAU1	98	86.705	Gopherus_agassizii
ENSLACG00000016157	STAU1	96	77.220	ENSGGOG00000025351	STAU1	99	85.359	Gorilla_gorilla
ENSLACG00000016157	STAU1	97	72.845	ENSHBUG00000023668	stau1	98	72.845	Haplochromis_burtoni
ENSLACG00000016157	STAU1	70	81.891	ENSHGLG00000008730	STAU1	99	83.231	Heterocephalus_glaber_female
ENSLACG00000016157	STAU1	70	81.891	ENSHGLG00100000098	STAU1	99	83.231	Heterocephalus_glaber_male
ENSLACG00000016157	STAU1	94	71.768	ENSHCOG00000018461	stau1	98	70.216	Hippocampus_comes
ENSLACG00000016157	STAU1	97	70.504	ENSIPUG00000023725	stau1	98	70.504	Ictalurus_punctatus
ENSLACG00000016157	STAU1	70	81.087	ENSSTOG00000003634	STAU1	99	82.413	Ictidomys_tridecemlineatus
ENSLACG00000016157	STAU1	70	79.678	ENSJJAG00000020032	Stau1	99	80.982	Jaculus_jaculus
ENSLACG00000016157	STAU1	96	71.286	ENSKMAG00000007135	stau1	95	73.669	Kryptolebias_marmoratus
ENSLACG00000016157	STAU1	97	72.206	ENSLBEG00000020172	stau1	98	72.206	Labrus_bergylta
ENSLACG00000016157	STAU1	97	76.868	ENSLOCG00000003134	stau1	98	78.161	Lepisosteus_oculatus
ENSLACG00000016157	STAU1	71	82.941	ENSLAFG00000003238	STAU1	99	82.941	Loxodonta_africana
ENSLACG00000016157	STAU1	96	83.529	ENSMFAG00000040931	STAU1	99	84.758	Macaca_fascicularis
ENSLACG00000016157	STAU1	96	77.413	ENSMMUG00000002302	STAU1	99	84.758	Macaca_mulatta
ENSLACG00000016157	STAU1	96	83.529	ENSMNEG00000033821	STAU1	99	83.529	Macaca_nemestrina
ENSLACG00000016157	STAU1	96	83.725	ENSMLEG00000031383	STAU1	99	83.725	Mandrillus_leucophaeus
ENSLACG00000016157	STAU1	97	73.782	ENSMAMG00000017586	stau1	99	74.340	Mastacembelus_armatus
ENSLACG00000016157	STAU1	97	72.806	ENSMZEG00005015605	stau1	98	72.806	Maylandia_zebra
ENSLACG00000016157	STAU1	97	83.613	ENSMGAG00000004719	STAU1	98	83.613	Meleagris_gallopavo
ENSLACG00000016157	STAU1	70	76.342	ENSMAUG00000013846	Stau1	99	77.576	Mesocricetus_auratus
ENSLACG00000016157	STAU1	96	81.395	ENSMICG00000001995	STAU1	99	81.395	Microcebus_murinus
ENSLACG00000016157	STAU1	70	77.510	ENSMOCG00000018743	Stau1	99	78.384	Microtus_ochrogaster
ENSLACG00000016157	STAU1	96	70.798	ENSMMOG00000015455	stau1	99	77.419	Mola_mola
ENSLACG00000016157	STAU1	95	85.546	ENSMODG00000016276	STAU1	99	85.546	Monodelphis_domestica
ENSLACG00000016157	STAU1	97	73.639	ENSMALG00000000045	stau1	98	73.639	Monopterus_albus
ENSLACG00000016157	STAU1	70	77.264	MGP_CAROLIEiJ_G0024699	Stau1	99	78.645	Mus_caroli
ENSLACG00000016157	STAU1	70	76.660	ENSMUSG00000039536	Stau1	99	78.029	Mus_musculus
ENSLACG00000016157	STAU1	70	77.062	MGP_PahariEiJ_G0026141	Stau1	99	78.323	Mus_pahari
ENSLACG00000016157	STAU1	70	76.660	MGP_SPRETEiJ_G0025619	Stau1	99	78.029	Mus_spretus
ENSLACG00000016157	STAU1	94	82.074	ENSMPUG00000017581	STAU1	99	82.074	Mustela_putorius_furo
ENSLACG00000016157	STAU1	96	82.549	ENSMLUG00000008407	STAU1	98	82.549	Myotis_lucifugus
ENSLACG00000016157	STAU1	78	80.808	ENSNGAG00000007108	Stau1	99	80.808	Nannospalax_galili
ENSLACG00000016157	STAU1	97	72.845	ENSNBRG00000017596	stau1	98	72.845	Neolamprologus_brichardi
ENSLACG00000016157	STAU1	96	82.941	ENSNLEG00000006955	STAU1	99	82.941	Nomascus_leucogenys
ENSLACG00000016157	STAU1	75	85.501	ENSMEUG00000003263	STAU1	91	87.202	Notamacropus_eugenii
ENSLACG00000016157	STAU1	95	80.157	ENSOPRG00000014569	STAU1	99	80.157	Ochotona_princeps
ENSLACG00000016157	STAU1	78	82.093	ENSODEG00000006523	STAU1	99	82.294	Octodon_degus
ENSLACG00000016157	STAU1	99	70.897	ENSONIG00000004152	stau1	99	70.897	Oreochromis_niloticus
ENSLACG00000016157	STAU1	99	80.690	ENSOANG00000006394	STAU1	98	83.477	Ornithorhynchus_anatinus
ENSLACG00000016157	STAU1	96	81.373	ENSOCUG00000006214	STAU1	99	81.373	Oryctolagus_cuniculus
ENSLACG00000016157	STAU1	97	71.571	ENSOMEG00000002388	stau1	98	71.571	Oryzias_melastigma
ENSLACG00000016157	STAU1	96	82.549	ENSOGAG00000002127	STAU1	98	82.549	Otolemur_garnettii
ENSLACG00000016157	STAU1	70	55.644	ENSOGAG00000028222	-	98	56.338	Otolemur_garnettii
ENSLACG00000016157	STAU1	96	82.157	ENSOARG00000012204	STAU1	99	81.657	Ovis_aries
ENSLACG00000016157	STAU1	96	77.220	ENSPPAG00000032023	STAU1	99	85.359	Pan_paniscus
ENSLACG00000016157	STAU1	96	83.922	ENSPPRG00000003436	STAU1	99	83.922	Panthera_pardus
ENSLACG00000016157	STAU1	96	83.922	ENSPTIG00000011768	STAU1	99	83.922	Panthera_tigris_altaica
ENSLACG00000016157	STAU1	96	77.220	ENSPTRG00000023130	STAU1	99	85.359	Pan_troglodytes
ENSLACG00000016157	STAU1	96	83.333	ENSPANG00000020560	STAU1	99	83.333	Papio_anubis
ENSLACG00000016157	STAU1	99	71.034	ENSPKIG00000024588	stau1	98	74.785	Paramormyrops_kingsleyae
ENSLACG00000016157	STAU1	97	86.416	ENSPSIG00000010731	STAU1	98	86.416	Pelodiscus_sinensis
ENSLACG00000016157	STAU1	99	70.678	ENSPMGG00000018553	stau1	99	74.545	Periophthalmus_magnuspinnatus
ENSLACG00000016157	STAU1	70	76.938	ENSPEMG00000022045	Stau1	99	78.182	Peromyscus_maniculatus_bairdii
ENSLACG00000016157	STAU1	95	85.465	ENSPCIG00000023269	STAU1	99	85.465	Phascolarctos_cinereus
ENSLACG00000016157	STAU1	97	72.818	ENSPFOG00000017253	stau1	98	72.818	Poecilia_formosa
ENSLACG00000016157	STAU1	57	74.447	ENSPLAG00000014829	stau1	96	74.677	Poecilia_latipinna
ENSLACG00000016157	STAU1	97	69.373	ENSPMEG00000007495	stau1	98	69.373	Poecilia_mexicana
ENSLACG00000016157	STAU1	97	72.532	ENSPREG00000003477	stau1	98	72.532	Poecilia_reticulata
ENSLACG00000016157	STAU1	96	83.137	ENSPPYG00000011111	STAU1	99	83.137	Pongo_abelii
ENSLACG00000016157	STAU1	87	75.833	ENSPCAG00000002459	STAU1	99	82.812	Procavia_capensis
ENSLACG00000016157	STAU1	96	82.157	ENSPCOG00000027746	STAU1	99	82.157	Propithecus_coquereli
ENSLACG00000016157	STAU1	80	85.667	ENSPVAG00000015019	STAU1	86	85.667	Pteropus_vampyrus
ENSLACG00000016157	STAU1	97	72.845	ENSPNYG00000014436	stau1	98	72.845	Pundamilia_nyererei
ENSLACG00000016157	STAU1	97	72.493	ENSPNAG00000011323	stau1	98	73.104	Pygocentrus_nattereri
ENSLACG00000016157	STAU1	70	76.342	ENSRNOG00000007781	Stau1	99	77.576	Rattus_norvegicus
ENSLACG00000016157	STAU1	71	81.496	ENSRBIG00000037345	STAU1	100	82.800	Rhinopithecus_bieti
ENSLACG00000016157	STAU1	96	83.529	ENSRROG00000039008	STAU1	99	83.529	Rhinopithecus_roxellana
ENSLACG00000016157	STAU1	96	82.558	ENSSBOG00000034448	STAU1	99	82.558	Saimiri_boliviensis_boliviensis
ENSLACG00000016157	STAU1	96	86.471	ENSSHAG00000009492	STAU1	99	85.546	Sarcophilus_harrisii
ENSLACG00000016157	STAU1	96	76.136	ENSSFOG00015021497	stau1	99	76.136	Scleropages_formosus
ENSLACG00000016157	STAU1	97	72.923	ENSSMAG00000017410	stau1	98	72.923	Scophthalmus_maximus
ENSLACG00000016157	STAU1	97	74.212	ENSSDUG00000019439	stau1	98	74.212	Seriola_dumerili
ENSLACG00000016157	STAU1	96	73.466	ENSSLDG00000025040	stau1	100	71.625	Seriola_lalandi_dorsalis
ENSLACG00000016157	STAU1	50	82.143	ENSSARG00000010389	-	63	82.143	Sorex_araneus
ENSLACG00000016157	STAU1	97	86.390	ENSSPUG00000017983	STAU1	99	86.530	Sphenodon_punctatus
ENSLACG00000016157	STAU1	96	73.466	ENSSPAG00000019275	stau1	100	71.625	Stegastes_partitus
ENSLACG00000016157	STAU1	96	83.333	ENSSSCG00000027444	STAU1	99	83.333	Sus_scrofa
ENSLACG00000016157	STAU1	97	82.797	ENSTGUG00000008784	STAU1	98	82.797	Taeniopygia_guttata
ENSLACG00000016157	STAU1	96	71.817	ENSTRUG00000005837	stau1	95	74.107	Takifugu_rubripes
ENSLACG00000016157	STAU1	96	70.429	ENSTNIG00000014732	stau1	98	72.889	Tetraodon_nigroviridis
ENSLACG00000016157	STAU1	88	77.834	ENSTBEG00000009404	STAU1	91	77.834	Tupaia_belangeri
ENSLACG00000016157	STAU1	74	84.375	ENSTTRG00000004285	STAU1	91	84.375	Tursiops_truncatus
ENSLACG00000016157	STAU1	71	80.990	ENSUAMG00000025449	STAU1	99	81.113	Ursus_americanus
ENSLACG00000016157	STAU1	54	78.329	ENSUMAG00000024475	STAU1	89	78.478	Ursus_maritimus
ENSLACG00000016157	STAU1	96	83.333	ENSVPAG00000001313	STAU1	99	83.333	Vicugna_pacos
ENSLACG00000016157	STAU1	94	82.692	ENSVVUG00000022325	STAU1	99	82.692	Vulpes_vulpes
ENSLACG00000016157	STAU1	99	78.039	ENSXETG00000001783	stau1	98	79.971	Xenopus_tropicalis
ENSLACG00000016157	STAU1	53	74.737	ENSXCOG00000008804	stau1	98	75.000	Xiphophorus_couchianus
ENSLACG00000016157	STAU1	97	73.027	ENSXMAG00000016175	stau1	98	73.027	Xiphophorus_maculatus