EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000016186 (Gene tree)
Gene ID: 102353107
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 125681 bases
Position: chrJH126755.1:1480091-1605771
Accession: 102353107
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018377	zf-CCCH	PF00642.24	0.00013	1	1
ENSLACP00000018376	zf-CCCH	PF00642.24	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000018510	RC3H1-202	4882	-	ENSLACP00000018377	930 (aa)	-	H3B906
ENSLACT00000018509	RC3H1-201	4605	XM_005994073	ENSLACP00000018376	1123 (aa)	-	H3B905

Gene Model

Click here to download ENSLACG00000016186's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016186's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016186	RC3H1	100	78.279	ENSG00000135870	RC3H1	100	75.217	Homo_sapiens
ENSLACG00000016186	RC3H1	100	78.279	ENSAMEG00000015657	RC3H1	100	75.436	Ailuropoda_melanoleuca
ENSLACG00000016186	RC3H1	100	77.339	ENSAPLG00000005341	RC3H1	100	73.947	Anas_platyrhynchos
ENSLACG00000016186	RC3H1	100	77.720	ENSACAG00000015271	RC3H1	100	73.826	Anolis_carolinensis
ENSLACG00000016186	RC3H1	100	78.069	ENSANAG00000036716	RC3H1	100	75.043	Aotus_nancymaae
ENSLACG00000016186	RC3H1	100	77.020	ENSBTAG00000052708	RC3H1	100	73.977	Bos_taurus
ENSLACG00000016186	RC3H1	100	78.069	ENSCJAG00000009106	RC3H1	100	75.022	Callithrix_jacchus
ENSLACG00000016186	RC3H1	100	77.754	ENSCAFG00000014434	RC3H1	100	75.174	Canis_familiaris
ENSLACG00000016186	RC3H1	100	77.754	ENSCAFG00020017112	RC3H1	99	95.506	Canis_lupus_dingo
ENSLACG00000016186	RC3H1	100	77.568	ENSCHIG00000002873	RC3H1	100	74.413	Capra_hircus
ENSLACG00000016186	RC3H1	100	77.987	ENSTSYG00000003913	RC3H1	99	74.629	Carlito_syrichta
ENSLACG00000016186	RC3H1	100	76.050	ENSCPOG00000004349	RC3H1	100	72.799	Cavia_porcellus
ENSLACG00000016186	RC3H1	100	77.859	ENSCCAG00000025652	RC3H1	98	76.554	Cebus_capucinus
ENSLACG00000016186	RC3H1	100	78.699	ENSCATG00000033497	RC3H1	100	75.565	Cercocebus_atys
ENSLACG00000016186	RC3H1	100	77.358	ENSCLAG00000011267	RC3H1	100	74.087	Chinchilla_lanigera
ENSLACG00000016186	RC3H1	100	78.594	ENSCSAG00000011823	RC3H1	84	76.594	Chlorocebus_sabaeus
ENSLACG00000016186	RC3H1	100	79.495	ENSCPBG00000014670	RC3H1	100	75.699	Chrysemys_picta_bellii
ENSLACG00000016186	RC3H1	100	78.804	ENSCANG00000032120	RC3H1	100	75.586	Colobus_angolensis_palliatus
ENSLACG00000016186	RC3H1	100	78.023	ENSCGRG00001020812	Rc3h1	100	74.782	Cricetulus_griseus_chok1gshd
ENSLACG00000016186	RC3H1	100	78.023	ENSCGRG00000011952	Rc3h1	100	74.782	Cricetulus_griseus_crigri
ENSLACG00000016186	RC3H1	61	66.212	ENSDNOG00000011494	RC3H1	99	65.409	Dasypus_novemcinctus
ENSLACG00000016186	RC3H1	100	77.859	ENSDORG00000004855	Rc3h1	100	74.739	Dipodomys_ordii
ENSLACG00000016186	RC3H1	89	76.185	ENSETEG00000012064	RC3H1	87	75.858	Echinops_telfairi
ENSLACG00000016186	RC3H1	100	78.046	ENSEASG00005017000	RC3H1	100	74.913	Equus_asinus_asinus
ENSLACG00000016186	RC3H1	100	77.941	ENSECAG00000021208	RC3H1	100	74.913	Equus_caballus
ENSLACG00000016186	RC3H1	94	76.580	ENSEEUG00000014861	RC3H1	93	76.580	Erinaceus_europaeus
ENSLACG00000016186	RC3H1	100	77.545	ENSFCAG00000014924	RC3H1	100	74.848	Felis_catus
ENSLACG00000016186	RC3H1	100	76.514	ENSFALG00000002947	RC3H1	100	73.010	Ficedula_albicollis
ENSLACG00000016186	RC3H1	100	77.463	ENSFDAG00000013303	RC3H1	100	74.174	Fukomys_damarensis
ENSLACG00000016186	RC3H1	100	77.463	ENSGALG00000004587	RC3H1	100	73.958	Gallus_gallus
ENSLACG00000016186	RC3H1	100	78.975	ENSGAGG00000018194	RC3H1	100	75.043	Gopherus_agassizii
ENSLACG00000016186	RC3H1	100	75.551	ENSGGOG00000005735	RC3H1	100	71.304	Gorilla_gorilla
ENSLACG00000016186	RC3H1	88	72.849	ENSHGLG00000004183	-	100	72.177	Heterocephalus_glaber_female
ENSLACG00000016186	RC3H1	100	77.568	ENSHGLG00100008577	RC3H1	100	74.413	Heterocephalus_glaber_male
ENSLACG00000016186	RC3H1	100	77.358	ENSSTOG00000016033	RC3H1	100	75.196	Ictidomys_tridecemlineatus
ENSLACG00000016186	RC3H1	100	78.174	ENSJJAG00000018915	Rc3h1	100	75.109	Jaculus_jaculus
ENSLACG00000016186	RC3H1	100	77.964	ENSLAFG00000004367	RC3H1	99	75.968	Loxodonta_africana
ENSLACG00000016186	RC3H1	100	78.804	ENSMFAG00000033725	RC3H1	100	75.652	Macaca_fascicularis
ENSLACG00000016186	RC3H1	100	78.594	ENSMMUG00000000630	RC3H1	100	75.478	Macaca_mulatta
ENSLACG00000016186	RC3H1	100	78.699	ENSMNEG00000035968	RC3H1	100	75.565	Macaca_nemestrina
ENSLACG00000016186	RC3H1	100	78.594	ENSMLEG00000037455	RC3H1	100	75.478	Mandrillus_leucophaeus
ENSLACG00000016186	RC3H1	100	77.941	ENSMAUG00000020864	Rc3h1	93	77.077	Mesocricetus_auratus
ENSLACG00000016186	RC3H1	100	77.545	ENSMICG00000003000	RC3H1	100	75.109	Microcebus_murinus
ENSLACG00000016186	RC3H1	92	75.657	ENSMOCG00000016587	Rc3h1	98	72.336	Microtus_ochrogaster
ENSLACG00000016186	RC3H1	100	77.941	ENSMODG00000004289	RC3H1	100	74.848	Monodelphis_domestica
ENSLACG00000016186	RC3H1	50	88.985	ENSMALG00000016106	rc3h1b	95	88.985	Monopterus_albus
ENSLACG00000016186	RC3H1	100	77.521	MGP_CAROLIEiJ_G0014756	Rc3h1	100	73.758	Mus_caroli
ENSLACG00000016186	RC3H1	100	77.941	ENSMUSG00000040423	Rc3h1	100	74.019	Mus_musculus
ENSLACG00000016186	RC3H1	100	77.941	MGP_PahariEiJ_G0027992	Rc3h1	100	74.106	Mus_pahari
ENSLACG00000016186	RC3H1	100	77.941	MGP_SPRETEiJ_G0015563	Rc3h1	100	73.932	Mus_spretus
ENSLACG00000016186	RC3H1	100	77.859	ENSMPUG00000004747	RC3H1	100	75.000	Mustela_putorius_furo
ENSLACG00000016186	RC3H1	100	78.247	ENSMLUG00000011127	RC3H1	100	75.744	Myotis_lucifugus
ENSLACG00000016186	RC3H1	100	78.151	ENSNGAG00000011135	Rc3h1	100	74.717	Nannospalax_galili
ENSLACG00000016186	RC3H1	100	78.594	ENSNLEG00000015327	RC3H1	100	75.478	Nomascus_leucogenys
ENSLACG00000016186	RC3H1	99	68.592	ENSOPRG00000013068	RC3H1	99	65.066	Ochotona_princeps
ENSLACG00000016186	RC3H1	100	77.568	ENSODEG00000014185	RC3H1	100	73.803	Octodon_degus
ENSLACG00000016186	RC3H1	99	78.953	ENSOANG00000000924	RC3H1	100	75.022	Ornithorhynchus_anatinus
ENSLACG00000016186	RC3H1	100	77.568	ENSOCUG00000004930	RC3H1	99	74.413	Oryctolagus_cuniculus
ENSLACG00000016186	RC3H1	100	69.979	ENSOGAG00000004044	RC3H1	100	68.549	Otolemur_garnettii
ENSLACG00000016186	RC3H1	99	77.521	ENSOARG00000013011	RC3H1	100	74.244	Ovis_aries
ENSLACG00000016186	RC3H1	100	78.279	ENSPPAG00000039253	RC3H1	100	75.152	Pan_paniscus
ENSLACG00000016186	RC3H1	100	77.754	ENSPPRG00000009007	RC3H1	100	74.739	Panthera_pardus
ENSLACG00000016186	RC3H1	100	77.244	ENSPTIG00000015326	RC3H1	100	74.761	Panthera_tigris_altaica
ENSLACG00000016186	RC3H1	100	78.279	ENSPTRG00000001702	RC3H1	100	75.152	Pan_troglodytes
ENSLACG00000016186	RC3H1	100	78.804	ENSPANG00000008886	RC3H1	100	75.652	Papio_anubis
ENSLACG00000016186	RC3H1	100	79.245	ENSPSIG00000016181	RC3H1	100	75.391	Pelodiscus_sinensis
ENSLACG00000016186	RC3H1	100	77.964	ENSPEMG00000011966	Rc3h1	100	75.174	Peromyscus_maniculatus_bairdii
ENSLACG00000016186	RC3H1	84	80.402	ENSPCIG00000002058	RC3H1	95	95.740	Phascolarctos_cinereus
ENSLACG00000016186	RC3H1	100	78.804	ENSPPYG00000000490	RC3H1	98	76.576	Pongo_abelii
ENSLACG00000016186	RC3H1	80	84.211	ENSPCAG00000010775	RC3H1	87	84.211	Procavia_capensis
ENSLACG00000016186	RC3H1	82	70.378	ENSPCOG00000021795	RC3H1	96	70.798	Propithecus_coquereli
ENSLACG00000016186	RC3H1	100	69.799	ENSPVAG00000007593	RC3H1	100	68.416	Pteropus_vampyrus
ENSLACG00000016186	RC3H1	100	64.499	ENSPNAG00000023439	rc3h1a	95	90.541	Pygocentrus_nattereri
ENSLACG00000016186	RC3H1	100	78.699	ENSRBIG00000037743	RC3H1	100	75.500	Rhinopithecus_bieti
ENSLACG00000016186	RC3H1	100	78.489	ENSRROG00000036546	RC3H1	100	75.391	Rhinopithecus_roxellana
ENSLACG00000016186	RC3H1	92	75.799	ENSSBOG00000010664	RC3H1	100	69.541	Saimiri_boliviensis_boliviensis
ENSLACG00000016186	RC3H1	100	78.361	ENSSHAG00000007589	RC3H1	100	75.043	Sarcophilus_harrisii
ENSLACG00000016186	RC3H1	81	85.360	ENSSARG00000004660	RC3H1	80	85.360	Sorex_araneus
ENSLACG00000016186	RC3H1	100	74.187	ENSSPUG00000018472	RC3H1	100	71.229	Sphenodon_punctatus
ENSLACG00000016186	RC3H1	100	78.069	ENSSSCG00000015498	RC3H1	100	75.261	Sus_scrofa
ENSLACG00000016186	RC3H1	100	76.963	ENSTGUG00000004090	RC3H1	100	73.785	Taeniopygia_guttata
ENSLACG00000016186	RC3H1	91	80.863	ENSTBEG00000005015	RC3H1	88	80.458	Tupaia_belangeri
ENSLACG00000016186	RC3H1	100	77.230	ENSTTRG00000008572	RC3H1	100	74.392	Tursiops_truncatus
ENSLACG00000016186	RC3H1	100	78.376	ENSUAMG00000019525	RC3H1	100	75.416	Ursus_americanus
ENSLACG00000016186	RC3H1	100	78.174	ENSUMAG00000020087	RC3H1	100	75.196	Ursus_maritimus
ENSLACG00000016186	RC3H1	90	96.396	ENSVPAG00000002591	RC3H1	89	96.396	Vicugna_pacos
ENSLACG00000016186	RC3H1	100	77.429	ENSVVUG00000014201	RC3H1	98	91.004	Vulpes_vulpes
ENSLACG00000016186	RC3H1	100	75.444	ENSXETG00000020030	rc3h1	100	71.342	Xenopus_tropicalis