EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000016281 (Gene tree)
Gene ID: 102350336
Gene Symbol: zgc:171480
Alias: -
Full Name: mitochondrial ribosomal protein L55
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 13691 bases
Position: chrJH126649.1:1512990-1526680
Accession: 102350336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018490	Mitoc_L55	PF09776.9	1.4e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000018623	-	1621	XM_005991126	ENSLACP00000018490	132 (aa)	XP_005991188	H3B9B9

Gene Model

Click here to download ENSLACG00000016281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016281's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016281	zgc:171480	77	61.386	ENSAPOG00000002881	zgc:171480	69	61.386	Acanthochromis_polyacanthus
ENSLACG00000016281	zgc:171480	81	59.813	ENSACIG00000001646	zgc:171480	78	59.813	Amphilophus_citrinellus
ENSLACG00000016281	zgc:171480	81	59.813	ENSAOCG00000016155	zgc:171480	74	59.813	Amphiprion_ocellaris
ENSLACG00000016281	zgc:171480	81	59.813	ENSAPEG00000022327	zgc:171480	74	59.813	Amphiprion_percula
ENSLACG00000016281	zgc:171480	80	62.264	ENSATEG00000005625	zgc:171480	71	62.264	Anabas_testudineus
ENSLACG00000016281	zgc:171480	98	55.814	ENSACAG00000006897	-	92	55.814	Anolis_carolinensis
ENSLACG00000016281	zgc:171480	77	60.396	ENSACLG00000005172	zgc:171480	72	60.396	Astatotilapia_calliptera
ENSLACG00000016281	zgc:171480	89	65.254	ENSAMXG00000043839	zgc:171480	89	65.254	Astyanax_mexicanus
ENSLACG00000016281	zgc:171480	89	60.684	ENSCPBG00000001771	-	93	59.829	Chrysemys_picta_bellii
ENSLACG00000016281	zgc:171480	79	55.769	ENSCSEG00000019533	zgc:171480	74	57.692	Cynoglossus_semilaevis
ENSLACG00000016281	zgc:171480	90	57.143	ENSDARG00000043402	zgc:171480	89	57.143	Danio_rerio
ENSLACG00000016281	zgc:171480	88	62.069	ENSELUG00000007716	zgc:171480	83	64.348	Esox_lucius
ENSLACG00000016281	zgc:171480	79	55.769	ENSFALG00000001083	-	100	53.846	Ficedula_albicollis
ENSLACG00000016281	zgc:171480	79	59.615	ENSFHEG00000000203	zgc:171480	81	57.018	Fundulus_heteroclitus
ENSLACG00000016281	zgc:171480	78	65.049	ENSGMOG00000019009	zgc:171480	100	65.049	Gadus_morhua
ENSLACG00000016281	zgc:171480	77	59.406	ENSGALG00000038820	-	99	54.386	Gallus_gallus
ENSLACG00000016281	zgc:171480	90	57.025	ENSGAFG00000004832	-	83	57.025	Gambusia_affinis
ENSLACG00000016281	zgc:171480	70	62.366	ENSGACG00000002136	zgc:171480	100	65.591	Gasterosteus_aculeatus
ENSLACG00000016281	zgc:171480	88	58.621	ENSGAGG00000001806	-	93	58.621	Gopherus_agassizii
ENSLACG00000016281	zgc:171480	77	60.396	ENSHBUG00000007895	zgc:171480	72	60.396	Haplochromis_burtoni
ENSLACG00000016281	zgc:171480	80	61.905	ENSHCOG00000003526	zgc:171480	57	61.905	Hippocampus_comes
ENSLACG00000016281	zgc:171480	89	61.864	ENSIPUG00000001273	mrpl55	89	61.864	Ictalurus_punctatus
ENSLACG00000016281	zgc:171480	79	59.615	ENSKMAG00000002011	zgc:171480	81	59.615	Kryptolebias_marmoratus
ENSLACG00000016281	zgc:171480	96	55.906	ENSLBEG00000010915	zgc:171480	94	55.906	Labrus_bergylta
ENSLACG00000016281	zgc:171480	96	55.906	ENSLBEG00000016107	-	94	55.906	Labrus_bergylta
ENSLACG00000016281	zgc:171480	81	58.879	ENSMAMG00000022250	zgc:171480	72	58.879	Mastacembelus_armatus
ENSLACG00000016281	zgc:171480	77	60.396	ENSMZEG00005015585	zgc:171480	72	60.396	Maylandia_zebra
ENSLACG00000016281	zgc:171480	77	62.376	ENSMGAG00000002612	-	88	61.386	Meleagris_gallopavo
ENSLACG00000016281	zgc:171480	80	49.057	ENSMMOG00000008740	-	79	47.170	Mola_mola
ENSLACG00000016281	zgc:171480	92	51.639	ENSMALG00000019823	zgc:171480	94	51.639	Monopterus_albus
ENSLACG00000016281	zgc:171480	77	59.406	ENSNBRG00000019447	zgc:171480	72	59.406	Neolamprologus_brichardi
ENSLACG00000016281	zgc:171480	77	58.416	ENSONIG00000007645	zgc:171480	74	58.416	Oreochromis_niloticus
ENSLACG00000016281	zgc:171480	77	53.922	ENSORLG00020006963	zgc:171480	75	53.922	Oryzias_latipes_hni
ENSLACG00000016281	zgc:171480	77	54.455	ENSORLG00015003266	zgc:171480	75	53.922	Oryzias_latipes_hsok
ENSLACG00000016281	zgc:171480	79	55.769	ENSOMEG00000008184	zgc:171480	75	55.769	Oryzias_melastigma
ENSLACG00000016281	zgc:171480	81	64.486	ENSPKIG00000006753	zgc:171480	83	64.486	Paramormyrops_kingsleyae
ENSLACG00000016281	zgc:171480	88	59.483	ENSPSIG00000010893	-	92	59.483	Pelodiscus_sinensis
ENSLACG00000016281	zgc:171480	82	54.630	ENSPMGG00000012657	-	84	54.630	Periophthalmus_magnuspinnatus
ENSLACG00000016281	zgc:171480	70	52.128	ENSPMAG00000000867	zgc:171480	96	47.826	Petromyzon_marinus
ENSLACG00000016281	zgc:171480	93	50.407	ENSPCIG00000021848	-	98	50.407	Phascolarctos_cinereus
ENSLACG00000016281	zgc:171480	89	54.622	ENSPFOG00000012703	zgc:171480	84	54.622	Poecilia_formosa
ENSLACG00000016281	zgc:171480	97	51.538	ENSPREG00000020328	zgc:171480	92	51.538	Poecilia_reticulata
ENSLACG00000016281	zgc:171480	90	65.546	ENSPNAG00000017309	zgc:171480	90	65.546	Pygocentrus_nattereri
ENSLACG00000016281	zgc:171480	89	61.538	ENSSFOG00015015668	mrpl55	89	61.538	Scleropages_formosus
ENSLACG00000016281	zgc:171480	79	61.538	ENSSMAG00000005429	zgc:171480	74	61.538	Scophthalmus_maximus
ENSLACG00000016281	zgc:171480	86	53.846	ENSSDUG00000022556	zgc:171480	79	53.846	Seriola_dumerili
ENSLACG00000016281	zgc:171480	86	53.846	ENSSLDG00000019598	zgc:171480	79	53.846	Seriola_lalandi_dorsalis
ENSLACG00000016281	zgc:171480	89	59.322	ENSSPUG00000000735	-	94	58.475	Sphenodon_punctatus
ENSLACG00000016281	zgc:171480	81	60.748	ENSSPAG00000011598	zgc:171480	75	60.748	Stegastes_partitus
ENSLACG00000016281	zgc:171480	80	57.547	ENSTRUG00000003082	zgc:171480	74	57.547	Takifugu_rubripes
ENSLACG00000016281	zgc:171480	70	61.290	ENSXCOG00000005887	zgc:171480	75	61.290	Xiphophorus_couchianus
ENSLACG00000016281	zgc:171480	95	51.562	ENSXMAG00000007937	zgc:171480	92	51.538	Xiphophorus_maculatus