EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000016284 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 2266 bases
Position: chrJH126841.1:1514396-1516661
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018493	RVT_1	PF00078.27	3e-18	1	1
ENSLACP00000018494	RVT_1	PF00078.27	9.6e-11	1	1
ENSLACP00000018495	RVT_1	PF00078.27	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000018627	-	552	-	ENSLACP00000018494	184 (aa)	-	H3B9C3
ENSLACT00000018626	-	1785	-	ENSLACP00000018493	595 (aa)	-	H3B9C2
ENSLACT00000018628	-	621	-	ENSLACP00000018495	207 (aa)	-	H3B9C4

Gene Model

Click here to download ENSLACG00000016284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016284's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000016284	-	100	60.000	ENSLACG00000010776	-	61	74.332
ENSLACG00000016284	-	96	45.283	ENSLACG00000002169	-	81	36.364
ENSLACG00000016284	-	98	38.511	ENSLACG00000017143	-	97	38.511
ENSLACG00000016284	-	77	36.301	ENSLACG00000010373	-	85	36.190
ENSLACG00000016284	-	63	34.426	ENSLACG00000014604	-	67	36.000
ENSLACG00000016284	-	100	37.615	ENSLACG00000001186	-	56	49.074
ENSLACG00000016284	-	99	49.545	ENSLACG00000009168	-	96	37.785
ENSLACG00000016284	-	100	41.667	ENSLACG00000014947	-	52	33.816
ENSLACG00000016284	-	100	45.249	ENSLACG00000001892	-	63	45.249
ENSLACG00000016284	-	83	30.978	ENSLACG00000003900	-	58	32.065
ENSLACG00000016284	-	63	32.061	ENSLACG00000005904	-	76	31.163
ENSLACG00000016284	-	88	34.010	ENSLACG00000000714	-	97	33.503
ENSLACG00000016284	-	86	37.234	ENSLACG00000010227	-	77	37.234
ENSLACG00000016284	-	64	30.894	ENSLACG00000000981	-	56	30.894
ENSLACG00000016284	-	100	48.148	ENSLACG00000002249	-	82	48.148

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016284	-	64	63.115	ENSPKIG00000008866	-	97	52.163	Paramormyrops_kingsleyae