EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000016351 (Gene tree)
Gene ID: 102352082
Gene Symbol: smpd2b
Alias: zmp:0000000637
Full Name: sphingomyelin phosphodiesterase 2
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 13430 bases
Position: chrJH126587.1:1545286-1558715
Accession: 102352082
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018570	Exo_endo_phos	PF03372.23	6.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000018703	-	1230	XM_005988419	ENSLACP00000018570	410 (aa)	XP_005988481	H3B9J9

Gene Model

Click here to download ENSLACG00000016351's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm00600	Sphingolipid metabolism	KEGG
lcm01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016351's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016351	smpd2b	77	50.938	ENSG00000135587	SMPD2	90	44.757	Homo_sapiens
ENSLACG00000016351	smpd2b	77	51.250	ENSAMEG00000016431	SMPD2	90	45.013	Ailuropoda_melanoleuca
ENSLACG00000016351	smpd2b	96	61.675	ENSACIG00000010069	smpd2b	96	59.069	Amphilophus_citrinellus
ENSLACG00000016351	smpd2b	97	59.314	ENSAOCG00000014544	smpd2b	92	59.314	Amphiprion_ocellaris
ENSLACG00000016351	smpd2b	97	59.705	ENSAPEG00000023764	smpd2b	92	59.705	Amphiprion_percula
ENSLACG00000016351	smpd2b	97	59.559	ENSATEG00000025113	smpd2b	93	59.559	Anabas_testudineus
ENSLACG00000016351	smpd2b	93	59.530	ENSACAG00000009270	SMPD2	95	59.530	Anolis_carolinensis
ENSLACG00000016351	smpd2b	77	51.875	ENSANAG00000028732	SMPD2	91	45.013	Aotus_nancymaae
ENSLACG00000016351	smpd2b	97	60.442	ENSACLG00000022892	smpd2b	92	60.442	Astatotilapia_calliptera
ENSLACG00000016351	smpd2b	96	58.000	ENSAMXG00000013614	smpd2b	93	58.000	Astyanax_mexicanus
ENSLACG00000016351	smpd2b	95	44.275	ENSBTAG00000008145	SMPD2	63	44.275	Bos_taurus
ENSLACG00000016351	smpd2b	91	35.787	WBGene00012105	T27F6.6	71	40.453	Caenorhabditis_elegans
ENSLACG00000016351	smpd2b	77	51.875	ENSCJAG00000005756	SMPD2	76	51.875	Callithrix_jacchus
ENSLACG00000016351	smpd2b	77	51.875	ENSCAFG00000003816	SMPD2	90	45.780	Canis_familiaris
ENSLACG00000016351	smpd2b	79	50.153	ENSCHIG00000022563	SMPD2	92	43.860	Capra_hircus
ENSLACG00000016351	smpd2b	77	52.500	ENSTSYG00000008525	SMPD2	76	52.500	Carlito_syrichta
ENSLACG00000016351	smpd2b	59	53.719	ENSCAPG00000008057	SMPD2	69	53.719	Cavia_aperea
ENSLACG00000016351	smpd2b	77	50.938	ENSCPOG00000003102	SMPD2	74	50.938	Cavia_porcellus
ENSLACG00000016351	smpd2b	77	51.562	ENSCCAG00000036357	SMPD2	91	44.757	Cebus_capucinus
ENSLACG00000016351	smpd2b	77	51.875	ENSCATG00000015266	SMPD2	90	45.524	Cercocebus_atys
ENSLACG00000016351	smpd2b	69	54.417	ENSCLAG00000009948	SMPD2	63	53.633	Chinchilla_lanigera
ENSLACG00000016351	smpd2b	77	51.562	ENSCSAG00000015322	SMPD2	90	45.269	Chlorocebus_sabaeus
ENSLACG00000016351	smpd2b	97	62.500	ENSCPBG00000017837	SMPD2	99	62.500	Chrysemys_picta_bellii
ENSLACG00000016351	smpd2b	77	51.875	ENSCANG00000029491	SMPD2	90	45.524	Colobus_angolensis_palliatus
ENSLACG00000016351	smpd2b	94	48.082	ENSCGRG00001019999	Smpd2	91	47.826	Cricetulus_griseus_chok1gshd
ENSLACG00000016351	smpd2b	94	48.082	ENSCGRG00000008928	Smpd2	91	47.826	Cricetulus_griseus_crigri
ENSLACG00000016351	smpd2b	97	60.197	ENSCSEG00000016030	smpd2b	92	60.197	Cynoglossus_semilaevis
ENSLACG00000016351	smpd2b	97	58.765	ENSCVAG00000020815	smpd2b	92	58.765	Cyprinodon_variegatus
ENSLACG00000016351	smpd2b	97	60.957	ENSDARG00000052701	smpd2b	92	60.957	Danio_rerio
ENSLACG00000016351	smpd2b	97	52.120	ENSDARG00000040523	smpd2a	92	52.369	Danio_rerio
ENSLACG00000016351	smpd2b	79	50.459	ENSDNOG00000003948	SMPD2	77	50.459	Dasypus_novemcinctus
ENSLACG00000016351	smpd2b	77	52.500	ENSDORG00000006485	Smpd2	91	45.524	Dipodomys_ordii
ENSLACG00000016351	smpd2b	65	37.218	FBgn0035421	CG12034	61	36.861	Drosophila_melanogaster
ENSLACG00000016351	smpd2b	94	51.385	ENSEBUG00000002962	smpd2b	94	51.385	Eptatretus_burgeri
ENSLACG00000016351	smpd2b	79	52.266	ENSEASG00005006484	SMPD2	77	52.266	Equus_asinus_asinus
ENSLACG00000016351	smpd2b	77	52.778	ENSECAG00000016972	SMPD2	76	52.778	Equus_caballus
ENSLACG00000016351	smpd2b	97	60.591	ENSELUG00000021534	smpd2b	92	60.591	Esox_lucius
ENSLACG00000016351	smpd2b	77	52.500	ENSFCAG00000006358	SMPD2	90	45.780	Felis_catus
ENSLACG00000016351	smpd2b	97	60.302	ENSFALG00000003639	SMPD2	97	60.302	Ficedula_albicollis
ENSLACG00000016351	smpd2b	97	59.506	ENSFHEG00000017395	smpd2b	92	59.506	Fundulus_heteroclitus
ENSLACG00000016351	smpd2b	96	52.551	ENSGMOG00000015239	smpd2b	92	52.551	Gadus_morhua
ENSLACG00000016351	smpd2b	97	59.296	ENSGALG00000033245	SMPD2	97	59.296	Gallus_gallus
ENSLACG00000016351	smpd2b	97	58.765	ENSGAFG00000016345	smpd2b	92	58.765	Gambusia_affinis
ENSLACG00000016351	smpd2b	97	58.313	ENSGACG00000005132	smpd2b	94	58.313	Gasterosteus_aculeatus
ENSLACG00000016351	smpd2b	97	62.657	ENSGAGG00000023942	SMPD2	98	62.657	Gopherus_agassizii
ENSLACG00000016351	smpd2b	77	51.250	ENSGGOG00000003394	SMPD2	90	45.013	Gorilla_gorilla
ENSLACG00000016351	smpd2b	77	49.688	ENSHGLG00000000226	SMPD2	76	49.688	Heterocephalus_glaber_female
ENSLACG00000016351	smpd2b	77	49.688	ENSHGLG00100016698	SMPD2	76	49.688	Heterocephalus_glaber_male
ENSLACG00000016351	smpd2b	97	58.519	ENSHCOG00000001358	smpd2b	96	57.656	Hippocampus_comes
ENSLACG00000016351	smpd2b	97	47.475	ENSIPUG00000017284	smpd2a	92	47.475	Ictalurus_punctatus
ENSLACG00000016351	smpd2b	95	58.376	ENSIPUG00000024794	smpd2b	92	58.376	Ictalurus_punctatus
ENSLACG00000016351	smpd2b	94	46.803	ENSSTOG00000028661	SMPD2	91	45.780	Ictidomys_tridecemlineatus
ENSLACG00000016351	smpd2b	83	51.014	ENSJJAG00000019368	Smpd2	76	53.125	Jaculus_jaculus
ENSLACG00000016351	smpd2b	97	59.901	ENSKMAG00000015753	smpd2b	91	61.795	Kryptolebias_marmoratus
ENSLACG00000016351	smpd2b	95	60.102	ENSLBEG00000024878	smpd2b	91	60.102	Labrus_bergylta
ENSLACG00000016351	smpd2b	97	61.940	ENSLOCG00000009741	smpd2b	93	61.940	Lepisosteus_oculatus
ENSLACG00000016351	smpd2b	79	47.866	ENSLAFG00000003298	SMPD2	92	44.643	Loxodonta_africana
ENSLACG00000016351	smpd2b	77	51.875	ENSMFAG00000033236	SMPD2	90	45.524	Macaca_fascicularis
ENSLACG00000016351	smpd2b	77	51.875	ENSMNEG00000042401	SMPD2	90	45.524	Macaca_nemestrina
ENSLACG00000016351	smpd2b	65	52.768	ENSMLEG00000039457	SMPD2	89	45.322	Mandrillus_leucophaeus
ENSLACG00000016351	smpd2b	97	60.197	ENSMAMG00000004710	smpd2b	92	60.197	Mastacembelus_armatus
ENSLACG00000016351	smpd2b	97	60.442	ENSMZEG00005002958	smpd2b	92	60.442	Maylandia_zebra
ENSLACG00000016351	smpd2b	97	58.897	ENSMGAG00000006821	SMPD2	97	58.897	Meleagris_gallopavo
ENSLACG00000016351	smpd2b	77	51.875	ENSMAUG00000008721	Smpd2	91	45.524	Mesocricetus_auratus
ENSLACG00000016351	smpd2b	77	52.500	ENSMICG00000014442	SMPD2	90	46.036	Microcebus_murinus
ENSLACG00000016351	smpd2b	94	47.826	ENSMOCG00000019666	Smpd2	92	46.547	Microtus_ochrogaster
ENSLACG00000016351	smpd2b	99	58.049	ENSMMOG00000012679	smpd2b	95	58.049	Mola_mola
ENSLACG00000016351	smpd2b	78	48.368	ENSMODG00000017971	SMPD2	86	46.809	Monodelphis_domestica
ENSLACG00000016351	smpd2b	97	60.539	ENSMALG00000000267	smpd2b	97	60.539	Monopterus_albus
ENSLACG00000016351	smpd2b	93	47.409	MGP_CAROLIEiJ_G0015268	Smpd2	90	46.373	Mus_caroli
ENSLACG00000016351	smpd2b	93	47.668	ENSMUSG00000019822	Smpd2	90	46.632	Mus_musculus
ENSLACG00000016351	smpd2b	99	45.411	MGP_PahariEiJ_G0030686	Smpd2	97	44.444	Mus_pahari
ENSLACG00000016351	smpd2b	93	48.705	MGP_SPRETEiJ_G0016077	Smpd2	90	47.668	Mus_spretus
ENSLACG00000016351	smpd2b	77	52.978	ENSMPUG00000010005	SMPD2	92	45.980	Mustela_putorius_furo
ENSLACG00000016351	smpd2b	79	50.610	ENSMLUG00000003793	SMPD2	90	45.269	Myotis_lucifugus
ENSLACG00000016351	smpd2b	61	57.028	ENSNGAG00000013670	Smpd2	94	57.028	Nannospalax_galili
ENSLACG00000016351	smpd2b	93	60.204	ENSNBRG00000008403	smpd2b	90	60.204	Neolamprologus_brichardi
ENSLACG00000016351	smpd2b	77	52.188	ENSNLEG00000012570	SMPD2	96	44.096	Nomascus_leucogenys
ENSLACG00000016351	smpd2b	79	47.546	ENSMEUG00000004602	SMPD2	87	46.322	Notamacropus_eugenii
ENSLACG00000016351	smpd2b	94	43.478	ENSOPRG00000012612	SMPD2	90	43.478	Ochotona_princeps
ENSLACG00000016351	smpd2b	97	60.049	ENSONIG00000014702	smpd2b	92	60.049	Oreochromis_niloticus
ENSLACG00000016351	smpd2b	94	45.524	ENSOCUG00000008607	SMPD2	90	45.524	Oryctolagus_cuniculus
ENSLACG00000016351	smpd2b	97	59.360	ENSORLG00000006334	smpd2b	92	59.360	Oryzias_latipes
ENSLACG00000016351	smpd2b	97	59.113	ENSORLG00020015231	smpd2b	92	59.113	Oryzias_latipes_hni
ENSLACG00000016351	smpd2b	97	59.360	ENSORLG00015010424	smpd2b	92	59.360	Oryzias_latipes_hsok
ENSLACG00000016351	smpd2b	97	60.197	ENSOMEG00000016121	smpd2b	92	60.197	Oryzias_melastigma
ENSLACG00000016351	smpd2b	94	47.074	ENSOGAG00000015505	SMPD2	90	46.547	Otolemur_garnettii
ENSLACG00000016351	smpd2b	96	40.695	ENSOARG00000010409	SMPD2	92	40.695	Ovis_aries
ENSLACG00000016351	smpd2b	77	51.250	ENSPPAG00000031363	SMPD2	90	45.013	Pan_paniscus
ENSLACG00000016351	smpd2b	79	51.070	ENSPPRG00000000099	SMPD2	90	45.269	Panthera_pardus
ENSLACG00000016351	smpd2b	77	51.562	ENSPTIG00000008954	SMPD2	90	45.013	Panthera_tigris_altaica
ENSLACG00000016351	smpd2b	77	51.250	ENSPTRG00000018484	SMPD2	90	45.013	Pan_troglodytes
ENSLACG00000016351	smpd2b	77	51.875	ENSPANG00000024480	SMPD2	90	45.524	Papio_anubis
ENSLACG00000016351	smpd2b	97	60.396	ENSPKIG00000011322	smpd2a	89	60.396	Paramormyrops_kingsleyae
ENSLACG00000016351	smpd2b	91	59.894	ENSPMGG00000000230	smpd2b	92	59.894	Periophthalmus_magnuspinnatus
ENSLACG00000016351	smpd2b	80	52.695	ENSPEMG00000018109	Smpd2	93	47.826	Peromyscus_maniculatus_bairdii
ENSLACG00000016351	smpd2b	79	54.848	ENSPMAG00000002460	smpd2b	94	54.683	Petromyzon_marinus
ENSLACG00000016351	smpd2b	79	50.303	ENSPCIG00000005984	SMPD2	86	48.787	Phascolarctos_cinereus
ENSLACG00000016351	smpd2b	97	59.012	ENSPFOG00000014164	smpd2b	92	59.012	Poecilia_formosa
ENSLACG00000016351	smpd2b	97	59.012	ENSPLAG00000014950	smpd2b	92	59.012	Poecilia_latipinna
ENSLACG00000016351	smpd2b	97	59.012	ENSPMEG00000002286	smpd2b	92	59.012	Poecilia_mexicana
ENSLACG00000016351	smpd2b	97	59.012	ENSPREG00000012181	smpd2b	92	59.012	Poecilia_reticulata
ENSLACG00000016351	smpd2b	76	52.381	ENSPPYG00000016908	-	65	45.855	Pongo_abelii
ENSLACG00000016351	smpd2b	98	45.388	ENSPCAG00000011808	SMPD2	78	50.765	Procavia_capensis
ENSLACG00000016351	smpd2b	77	53.125	ENSPCOG00000001714	SMPD2	90	46.292	Propithecus_coquereli
ENSLACG00000016351	smpd2b	94	47.059	ENSPVAG00000006556	SMPD2	89	47.409	Pteropus_vampyrus
ENSLACG00000016351	smpd2b	97	60.902	ENSPNYG00000005567	smpd2b	92	60.902	Pundamilia_nyererei
ENSLACG00000016351	smpd2b	97	57.921	ENSPNAG00000007986	smpd2b	92	57.921	Pygocentrus_nattereri
ENSLACG00000016351	smpd2b	94	45.780	ENSRNOG00000000306	Smpd2	91	45.269	Rattus_norvegicus
ENSLACG00000016351	smpd2b	77	51.875	ENSRBIG00000033388	SMPD2	90	45.524	Rhinopithecus_bieti
ENSLACG00000016351	smpd2b	77	51.562	ENSRROG00000037705	SMPD2	90	45.269	Rhinopithecus_roxellana
ENSLACG00000016351	smpd2b	77	51.875	ENSSBOG00000033929	SMPD2	91	45.524	Saimiri_boliviensis_boliviensis
ENSLACG00000016351	smpd2b	97	60.396	ENSSFOG00015022890	smpd2	92	60.396	Scleropages_formosus
ENSLACG00000016351	smpd2b	97	60.688	ENSSMAG00000008963	smpd2b	92	60.688	Scophthalmus_maximus
ENSLACG00000016351	smpd2b	95	61.000	ENSSDUG00000000098	smpd2b	90	61.000	Seriola_dumerili
ENSLACG00000016351	smpd2b	95	62.211	ENSSLDG00000009497	smpd2b	90	62.211	Seriola_lalandi_dorsalis
ENSLACG00000016351	smpd2b	99	45.301	ENSSARG00000006192	SMPD2	90	46.803	Sorex_araneus
ENSLACG00000016351	smpd2b	97	63.092	ENSSPUG00000013852	SMPD2	98	63.092	Sphenodon_punctatus
ENSLACG00000016351	smpd2b	97	59.804	ENSSPAG00000001844	smpd2b	92	59.804	Stegastes_partitus
ENSLACG00000016351	smpd2b	77	51.562	ENSSSCG00000004408	SMPD2	90	46.292	Sus_scrofa
ENSLACG00000016351	smpd2b	96	58.481	ENSTGUG00000001713	SMPD2	97	58.481	Taeniopygia_guttata
ENSLACG00000016351	smpd2b	97	59.950	ENSTRUG00000025701	smpd2b	93	59.950	Takifugu_rubripes
ENSLACG00000016351	smpd2b	97	59.850	ENSTNIG00000018297	smpd2b	98	59.850	Tetraodon_nigroviridis
ENSLACG00000016351	smpd2b	77	53.438	ENSTBEG00000009336	SMPD2	97	45.000	Tupaia_belangeri
ENSLACG00000016351	smpd2b	76	47.950	ENSTTRG00000004183	SMPD2	90	41.944	Tursiops_truncatus
ENSLACG00000016351	smpd2b	77	51.875	ENSUAMG00000018011	SMPD2	90	45.524	Ursus_americanus
ENSLACG00000016351	smpd2b	66	52.381	ENSUMAG00000025505	SMPD2	82	45.190	Ursus_maritimus
ENSLACG00000016351	smpd2b	97	43.325	ENSXETG00000000421	smpd2	99	43.970	Xenopus_tropicalis
ENSLACG00000016351	smpd2b	93	58.947	ENSXCOG00000015987	smpd2b	90	58.947	Xiphophorus_couchianus
ENSLACG00000016351	smpd2b	97	58.519	ENSXMAG00000018088	smpd2b	92	58.519	Xiphophorus_maculatus