EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000016439 (Gene tree)
Gene ID: 102366605
Gene Symbol: ESF1
Alias: C20orf6|bA526K24.1
Full Name: ESF1 nucleolar pre-rRNA processing protein homolog
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 64237 bases
Position: chrJH126795.1:1575280-1639516
Accession: 102366605
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018668	NUC153	PF08159.12	6.3e-13	1	1
ENSLACP00000018669	NUC153	PF08159.12	6.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000018802	ESF1-202	2598	-	ENSLACP00000018669	865 (aa)	-	H3B9U8
ENSLACT00000018801	ESF1-201	6697	XM_005995030	ENSLACP00000018668	865 (aa)	XP_005995092	H3B9U7

Gene Model

Click here to download ENSLACG00000016439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016439's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016439	ESF1	66	68.430	ENSG00000089048	ESF1	80	71.968	Homo_sapiens
ENSLACG00000016439	ESF1	59	59.091	ENSAPOG00000003004	esf1	99	58.902	Acanthochromis_polyacanthus
ENSLACG00000016439	ESF1	73	66.667	ENSAMEG00000008830	ESF1	65	69.665	Ailuropoda_melanoleuca
ENSLACG00000016439	ESF1	76	75.342	ENSACIG00000018305	esf1	92	70.588	Amphilophus_citrinellus
ENSLACG00000016439	ESF1	75	79.710	ENSAOCG00000006033	esf1	88	76.000	Amphiprion_ocellaris
ENSLACG00000016439	ESF1	75	79.710	ENSAPEG00000022385	esf1	89	76.000	Amphiprion_percula
ENSLACG00000016439	ESF1	76	80.000	ENSATEG00000016321	esf1	85	76.000	Anabas_testudineus
ENSLACG00000016439	ESF1	66	67.077	ENSAPLG00000012113	ESF1	66	67.019	Anas_platyrhynchos
ENSLACG00000016439	ESF1	66	67.190	ENSACAG00000000963	ESF1	66	67.077	Anolis_carolinensis
ENSLACG00000016439	ESF1	66	68.293	ENSANAG00000036778	ESF1	65	68.607	Aotus_nancymaae
ENSLACG00000016439	ESF1	82	78.261	ENSACLG00000002972	esf1	87	78.261	Astatotilapia_calliptera
ENSLACG00000016439	ESF1	75	65.823	ENSAMXG00000001172	esf1	90	65.823	Astyanax_mexicanus
ENSLACG00000016439	ESF1	73	65.517	ENSBTAG00000007130	ESF1	64	68.430	Bos_taurus
ENSLACG00000016439	ESF1	99	58.495	ENSCJAG00000004640	ESF1	65	68.783	Callithrix_jacchus
ENSLACG00000016439	ESF1	73	66.032	ENSCAFG00000005587	ESF1	65	68.959	Canis_familiaris
ENSLACG00000016439	ESF1	73	66.032	ENSCAFG00020027530	ESF1	65	68.959	Canis_lupus_dingo
ENSLACG00000016439	ESF1	99	55.973	ENSCHIG00000021188	ESF1	67	68.607	Capra_hircus
ENSLACG00000016439	ESF1	99	57.793	ENSTSYG00000009956	ESF1	65	68.607	Carlito_syrichta
ENSLACG00000016439	ESF1	74	82.857	ENSCAPG00000010333	-	90	81.176	Cavia_aperea
ENSLACG00000016439	ESF1	79	82.857	ENSCAPG00000010466	-	79	81.176	Cavia_aperea
ENSLACG00000016439	ESF1	99	57.572	ENSCCAG00000024521	ESF1	65	69.489	Cebus_capucinus
ENSLACG00000016439	ESF1	66	68.430	ENSCATG00000042792	ESF1	65	68.607	Cercocebus_atys
ENSLACG00000016439	ESF1	66	68.783	ENSCLAG00000013266	-	66	68.959	Chinchilla_lanigera
ENSLACG00000016439	ESF1	66	68.607	ENSCSAG00000011777	ESF1	65	68.783	Chlorocebus_sabaeus
ENSLACG00000016439	ESF1	70	43.011	ENSCING00000020446	-	89	50.746	Ciona_intestinalis
ENSLACG00000016439	ESF1	75	43.810	ENSCSAVG00000009015	-	88	50.000	Ciona_savignyi
ENSLACG00000016439	ESF1	66	68.838	ENSCANG00000030674	ESF1	65	68.959	Colobus_angolensis_palliatus
ENSLACG00000016439	ESF1	66	68.310	ENSCGRG00001018257	Esf1	66	67.901	Cricetulus_griseus_chok1gshd
ENSLACG00000016439	ESF1	74	72.308	ENSCSEG00000001159	esf1	87	68.493	Cynoglossus_semilaevis
ENSLACG00000016439	ESF1	74	71.233	ENSCVAG00000007894	esf1	92	70.000	Cyprinodon_variegatus
ENSLACG00000016439	ESF1	77	76.389	ENSDARG00000008740	esf1	87	74.390	Danio_rerio
ENSLACG00000016439	ESF1	66	68.070	ENSDNOG00000019409	ESF1	65	68.078	Dasypus_novemcinctus
ENSLACG00000016439	ESF1	99	55.670	ENSDORG00000016313	Esf1	66	68.430	Dipodomys_ordii
ENSLACG00000016439	ESF1	73	53.846	FBgn0024364	CG11417	86	53.846	Drosophila_melanogaster
ENSLACG00000016439	ESF1	64	80.000	ENSETEG00000004471	ESF1	76	60.788	Echinops_telfairi
ENSLACG00000016439	ESF1	66	51.020	ENSEBUG00000015161	esf1	87	50.853	Eptatretus_burgeri
ENSLACG00000016439	ESF1	99	58.501	ENSEASG00005001777	ESF1	65	69.665	Equus_asinus_asinus
ENSLACG00000016439	ESF1	99	58.613	ENSECAG00000019188	ESF1	65	69.665	Equus_caballus
ENSLACG00000016439	ESF1	66	47.183	ENSEEUG00000015837	-	86	46.384	Erinaceus_europaeus
ENSLACG00000016439	ESF1	99	54.821	ENSFCAG00000000919	ESF1	65	69.312	Felis_catus
ENSLACG00000016439	ESF1	66	66.490	ENSFALG00000010914	ESF1	65	67.077	Ficedula_albicollis
ENSLACG00000016439	ESF1	99	54.743	ENSFDAG00000014777	ESF1	67	67.901	Fukomys_damarensis
ENSLACG00000016439	ESF1	59	60.735	ENSFHEG00000014984	esf1	100	60.928	Fundulus_heteroclitus
ENSLACG00000016439	ESF1	99	55.809	ENSGALG00000034768	ESF1	99	56.800	Gallus_gallus
ENSLACG00000016439	ESF1	74	66.667	ENSGAFG00000000540	esf1	90	66.667	Gambusia_affinis
ENSLACG00000016439	ESF1	99	56.618	ENSGGOG00000006692	ESF1	65	68.430	Gorilla_gorilla
ENSLACG00000016439	ESF1	77	78.261	ENSHBUG00000001890	esf1	87	78.261	Haplochromis_burtoni
ENSLACG00000016439	ESF1	99	58.495	ENSHGLG00000011505	ESF1	67	68.959	Heterocephalus_glaber_female
ENSLACG00000016439	ESF1	99	58.495	ENSHGLG00100015045	ESF1	67	68.959	Heterocephalus_glaber_male
ENSLACG00000016439	ESF1	74	75.714	ENSIPUG00000006507	esf1	85	74.324	Ictalurus_punctatus
ENSLACG00000016439	ESF1	99	56.580	ENSJJAG00000012570	Esf1	65	68.254	Jaculus_jaculus
ENSLACG00000016439	ESF1	88	81.429	ENSLAFG00000005479	ESF1	99	57.355	Loxodonta_africana
ENSLACG00000016439	ESF1	66	68.607	ENSMFAG00000036841	ESF1	65	68.959	Macaca_fascicularis
ENSLACG00000016439	ESF1	66	68.607	ENSMNEG00000044042	ESF1	65	68.959	Macaca_nemestrina
ENSLACG00000016439	ESF1	66	68.607	ENSMLEG00000037121	ESF1	65	68.959	Mandrillus_leucophaeus
ENSLACG00000016439	ESF1	76	83.333	ENSMAMG00000018648	esf1	89	80.822	Mastacembelus_armatus
ENSLACG00000016439	ESF1	59	61.209	ENSMZEG00005013912	esf1	99	61.748	Maylandia_zebra
ENSLACG00000016439	ESF1	99	57.143	ENSMGAG00000004291	ESF1	99	55.455	Meleagris_gallopavo
ENSLACG00000016439	ESF1	66	68.486	ENSMAUG00000015975	Esf1	66	68.078	Mesocricetus_auratus
ENSLACG00000016439	ESF1	66	70.599	ENSMICG00000010711	ESF1	65	70.018	Microcebus_murinus
ENSLACG00000016439	ESF1	66	66.549	ENSMOCG00000005902	Esf1	67	66.138	Microtus_ochrogaster
ENSLACG00000016439	ESF1	59	61.143	ENSMMOG00000018693	esf1	100	59.733	Mola_mola
ENSLACG00000016439	ESF1	67	81.818	ENSMALG00000007338	esf1	78	82.609	Monopterus_albus
ENSLACG00000016439	ESF1	66	67.958	MGP_CAROLIEiJ_G0024365	Esf1	65	67.549	Mus_caroli
ENSLACG00000016439	ESF1	66	67.782	ENSMUSG00000045624	Esf1	65	67.372	Mus_musculus
ENSLACG00000016439	ESF1	66	68.078	MGP_PahariEiJ_G0025810	Esf1	66	67.725	Mus_pahari
ENSLACG00000016439	ESF1	66	67.725	MGP_SPRETEiJ_G0025285	Esf1	58	82.353	Mus_spretus
ENSLACG00000016439	ESF1	66	69.894	ENSMPUG00000001450	ESF1	65	69.665	Mustela_putorius_furo
ENSLACG00000016439	ESF1	99	57.853	ENSMLUG00000013080	ESF1	65	68.607	Myotis_lucifugus
ENSLACG00000016439	ESF1	66	67.372	ENSNLEG00000014563	ESF1	64	66.843	Nomascus_leucogenys
ENSLACG00000016439	ESF1	60	64.355	ENSOPRG00000004862	ESF1	99	64.355	Ochotona_princeps
ENSLACG00000016439	ESF1	99	56.932	ENSODEG00000006824	ESF1	68	68.430	Octodon_degus
ENSLACG00000016439	ESF1	78	79.710	ENSONIG00000006804	esf1	86	79.710	Oreochromis_niloticus
ENSLACG00000016439	ESF1	99	60.939	ENSOANG00000008432	-	66	70.370	Ornithorhynchus_anatinus
ENSLACG00000016439	ESF1	71	64.127	ENSOCUG00000005414	ESF1	66	66.314	Oryctolagus_cuniculus
ENSLACG00000016439	ESF1	59	58.614	ENSORLG00000018625	esf1	100	56.262	Oryzias_latipes
ENSLACG00000016439	ESF1	74	73.913	ENSORLG00015022826	esf1	90	73.913	Oryzias_latipes_hsok
ENSLACG00000016439	ESF1	59	58.647	ENSOMEG00000009311	esf1	99	59.662	Oryzias_melastigma
ENSLACG00000016439	ESF1	99	58.025	ENSOGAG00000016912	ESF1	99	57.883	Otolemur_garnettii
ENSLACG00000016439	ESF1	66	69.542	ENSOARG00000011158	ESF1	63	68.254	Ovis_aries
ENSLACG00000016439	ESF1	66	68.486	ENSPPAG00000024379	ESF1	65	68.783	Pan_paniscus
ENSLACG00000016439	ESF1	66	69.542	ENSPPRG00000012007	ESF1	65	69.312	Panthera_pardus
ENSLACG00000016439	ESF1	66	69.718	ENSPTIG00000020063	ESF1	65	69.489	Panthera_tigris_altaica
ENSLACG00000016439	ESF1	66	68.783	ENSPTRG00000013258	ESF1	65	68.959	Pan_troglodytes
ENSLACG00000016439	ESF1	74	82.192	ENSPKIG00000024448	esf1	78	80.263	Paramormyrops_kingsleyae
ENSLACG00000016439	ESF1	78	70.588	ENSPMGG00000016911	esf1	81	70.588	Periophthalmus_magnuspinnatus
ENSLACG00000016439	ESF1	76	71.642	ENSPFOG00000010101	esf1	88	71.642	Poecilia_formosa
ENSLACG00000016439	ESF1	59	59.073	ENSPLAG00000006452	esf1	100	58.447	Poecilia_latipinna
ENSLACG00000016439	ESF1	74	73.134	ENSPMEG00000000713	esf1	88	73.134	Poecilia_mexicana
ENSLACG00000016439	ESF1	66	68.607	ENSPPYG00000010715	ESF1	65	68.783	Pongo_abelii
ENSLACG00000016439	ESF1	74	55.401	ENSPCAG00000006881	ESF1	66	64.851	Procavia_capensis
ENSLACG00000016439	ESF1	67	81.429	ENSPVAG00000001295	ESF1	68	80.488	Pteropus_vampyrus
ENSLACG00000016439	ESF1	77	76.812	ENSPNYG00000015735	esf1	87	76.812	Pundamilia_nyererei
ENSLACG00000016439	ESF1	74	66.667	ENSPNAG00000014721	esf1	85	67.089	Pygocentrus_nattereri
ENSLACG00000016439	ESF1	66	67.782	ENSRNOG00000004777	Esf1	65	67.372	Rattus_norvegicus
ENSLACG00000016439	ESF1	66	68.783	ENSRBIG00000035763	ESF1	65	68.959	Rhinopithecus_bieti
ENSLACG00000016439	ESF1	74	82.857	ENSRROG00000032022	ESF1	65	69.136	Rhinopithecus_roxellana
ENSLACG00000016439	ESF1	66	68.662	ENSSBOG00000030387	ESF1	65	68.607	Saimiri_boliviensis_boliviensis
ENSLACG00000016439	ESF1	85	82.857	ENSSHAG00000000449	ESF1	68	68.662	Sarcophilus_harrisii
ENSLACG00000016439	ESF1	76	79.167	ENSSDUG00000019460	esf1	93	75.000	Seriola_dumerili
ENSLACG00000016439	ESF1	75	77.333	ENSSPAG00000019077	esf1	88	77.333	Stegastes_partitus
ENSLACG00000016439	ESF1	99	53.297	ENSSSCG00000007077	ESF1	64	68.607	Sus_scrofa
ENSLACG00000016439	ESF1	66	67.782	ENSTGUG00000002450	ESF1	64	67.314	Taeniopygia_guttata
ENSLACG00000016439	ESF1	80	62.500	ENSTRUG00000009445	esf1	87	76.812	Takifugu_rubripes
ENSLACG00000016439	ESF1	54	90.000	ENSTBEG00000008552	ESF1	61	84.444	Tupaia_belangeri
ENSLACG00000016439	ESF1	99	54.292	ENSTTRG00000005335	ESF1	65	67.549	Tursiops_truncatus
ENSLACG00000016439	ESF1	66	69.894	ENSUMAG00000008579	ESF1	65	69.489	Ursus_maritimus
ENSLACG00000016439	ESF1	58	77.733	ENSVPAG00000005291	ESF1	57	76.735	Vicugna_pacos
ENSLACG00000016439	ESF1	66	69.312	ENSVVUG00000014318	ESF1	61	68.959	Vulpes_vulpes
ENSLACG00000016439	ESF1	74	69.444	ENSXMAG00000017651	esf1	87	69.444	Xiphophorus_maculatus