EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000016445 (Gene tree)
Gene ID: 102345308
Gene Symbol: R3HDM4
Alias: C19orf22|MGC16353
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 26569 bases
Position: chrJH126867.1:1577127-1603695
Accession: 102345308
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018679	R3H	PF01424.22	2.8e-05	1	1
ENSLACP00000018678	R3H	PF01424.22	2.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000018811	R3HDM4-201	931	XM_005996336	ENSLACP00000018678	259 (aa)	XP_005996398	H3B9V7
ENSLACT00000018812	R3HDM4-202	777	-	ENSLACP00000018679	258 (aa)	-	H3B9V8

Gene Model

Click here to download ENSLACG00000016445's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016445's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016445	R3HDM4	94	61.633	ENSG00000198858	R3HDM4	90	64.126	Homo_sapiens
ENSLACG00000016445	R3HDM4	93	61.728	ENSAMEG00000003001	R3HDM4	99	61.728	Ailuropoda_melanoleuca
ENSLACG00000016445	R3HDM4	100	61.832	ENSACIG00000004672	r3hdm4	100	61.832	Amphilophus_citrinellus
ENSLACG00000016445	R3HDM4	98	61.628	ENSATEG00000015913	r3hdm4	99	61.628	Anabas_testudineus
ENSLACG00000016445	R3HDM4	93	61.728	ENSANAG00000029748	R3HDM4	100	61.728	Aotus_nancymaae
ENSLACG00000016445	R3HDM4	98	58.984	ENSBTAG00000046406	R3HDM4	95	58.984	Bos_taurus
ENSLACG00000016445	R3HDM4	94	61.633	ENSCJAG00000020114	R3HDM4	91	61.728	Callithrix_jacchus
ENSLACG00000016445	R3HDM4	94	62.449	ENSCAFG00000019665	R3HDM4	90	62.449	Canis_familiaris
ENSLACG00000016445	R3HDM4	94	62.041	ENSCAFG00020016880	R3HDM4	90	62.041	Canis_lupus_dingo
ENSLACG00000016445	R3HDM4	99	58.527	ENSCHIG00000020110	R3HDM4	99	58.527	Capra_hircus
ENSLACG00000016445	R3HDM4	93	60.905	ENSCCAG00000019955	R3HDM4	88	60.905	Cebus_capucinus
ENSLACG00000016445	R3HDM4	94	61.943	ENSCATG00000037269	R3HDM4	95	58.984	Cercocebus_atys
ENSLACG00000016445	R3HDM4	93	61.317	ENSCLAG00000007094	R3HDM4	99	61.317	Chinchilla_lanigera
ENSLACG00000016445	R3HDM4	97	60.630	ENSCSAG00000012574	R3HDM4	95	60.630	Chlorocebus_sabaeus
ENSLACG00000016445	R3HDM4	100	73.664	ENSCPBG00000009805	R3HDM4	100	73.664	Chrysemys_picta_bellii
ENSLACG00000016445	R3HDM4	94	61.382	ENSCANG00000040439	R3HDM4	86	61.382	Colobus_angolensis_palliatus
ENSLACG00000016445	R3HDM4	94	59.919	ENSCGRG00001021650	R3hdm4	93	59.919	Cricetulus_griseus_chok1gshd
ENSLACG00000016445	R3HDM4	94	59.919	ENSCGRG00000013169	R3hdm4	93	59.919	Cricetulus_griseus_crigri
ENSLACG00000016445	R3HDM4	100	56.870	ENSCSEG00000018211	r3hdm4	100	56.870	Cynoglossus_semilaevis
ENSLACG00000016445	R3HDM4	100	59.924	ENSCVAG00000017127	r3hdm4	100	59.924	Cyprinodon_variegatus
ENSLACG00000016445	R3HDM4	93	61.317	ENSDORG00000006605	R3hdm4	99	61.317	Dipodomys_ordii
ENSLACG00000016445	R3HDM4	95	62.195	ENSEASG00005021556	R3HDM4	95	59.231	Equus_asinus_asinus
ENSLACG00000016445	R3HDM4	94	62.449	ENSECAG00000000003	R3HDM4	90	62.551	Equus_caballus
ENSLACG00000016445	R3HDM4	94	62.449	ENSFCAG00000042437	R3HDM4	91	62.449	Felis_catus
ENSLACG00000016445	R3HDM4	93	71.784	ENSFALG00000013938	R3HDM4	100	71.784	Ficedula_albicollis
ENSLACG00000016445	R3HDM4	93	60.656	ENSFDAG00000017040	R3HDM4	99	60.656	Fukomys_damarensis
ENSLACG00000016445	R3HDM4	100	60.305	ENSFHEG00000017636	r3hdm4	100	60.305	Fundulus_heteroclitus
ENSLACG00000016445	R3HDM4	91	54.430	ENSGMOG00000001231	r3hdm4	97	53.165	Gadus_morhua
ENSLACG00000016445	R3HDM4	95	70.161	ENSGALG00000001998	R3HDM4	94	70.161	Gallus_gallus
ENSLACG00000016445	R3HDM4	100	62.977	ENSGAFG00000004173	r3hdm4	100	62.977	Gambusia_affinis
ENSLACG00000016445	R3HDM4	100	72.901	ENSGAGG00000019698	R3HDM4	100	72.901	Gopherus_agassizii
ENSLACG00000016445	R3HDM4	100	59.004	ENSGGOG00000008040	R3HDM4	99	61.728	Gorilla_gorilla
ENSLACG00000016445	R3HDM4	100	60.305	ENSHBUG00000014810	r3hdm4	100	60.305	Haplochromis_burtoni
ENSLACG00000016445	R3HDM4	94	59.592	ENSHGLG00000016194	R3HDM4	100	56.134	Heterocephalus_glaber_female
ENSLACG00000016445	R3HDM4	99	59.004	ENSHCOG00000008422	r3hdm4	99	59.004	Hippocampus_comes
ENSLACG00000016445	R3HDM4	100	61.004	ENSIPUG00000006716	r3hdm4	100	61.004	Ictalurus_punctatus
ENSLACG00000016445	R3HDM4	93	60.082	ENSSTOG00000023015	R3HDM4	99	60.082	Ictidomys_tridecemlineatus
ENSLACG00000016445	R3HDM4	93	60.331	ENSJJAG00000012475	R3hdm4	93	59.184	Jaculus_jaculus
ENSLACG00000016445	R3HDM4	100	59.924	ENSKMAG00000005853	r3hdm4	100	59.924	Kryptolebias_marmoratus
ENSLACG00000016445	R3HDM4	100	60.687	ENSLBEG00000000730	r3hdm4	100	60.687	Labrus_bergylta
ENSLACG00000016445	R3HDM4	100	66.538	ENSLOCG00000002423	r3hdm4	100	66.538	Lepisosteus_oculatus
ENSLACG00000016445	R3HDM4	93	61.826	ENSLAFG00000017796	R3HDM4	93	61.826	Loxodonta_africana
ENSLACG00000016445	R3HDM4	97	60.236	ENSMFAG00000044131	R3HDM4	95	60.236	Macaca_fascicularis
ENSLACG00000016445	R3HDM4	86	64.574	ENSMMUG00000009682	R3HDM4	90	64.574	Macaca_mulatta
ENSLACG00000016445	R3HDM4	93	62.140	ENSMNEG00000044115	R3HDM4	98	62.140	Macaca_nemestrina
ENSLACG00000016445	R3HDM4	93	61.633	ENSMLEG00000035693	R3HDM4	90	60.408	Mandrillus_leucophaeus
ENSLACG00000016445	R3HDM4	87	60.870	ENSMAMG00000005652	r3hdm4	91	60.699	Mastacembelus_armatus
ENSLACG00000016445	R3HDM4	94	59.919	ENSMAUG00000010611	R3hdm4	94	59.917	Mesocricetus_auratus
ENSLACG00000016445	R3HDM4	99	58.527	ENSMICG00000010124	R3HDM4	96	58.527	Microcebus_murinus
ENSLACG00000016445	R3HDM4	94	59.350	ENSMOCG00000002646	R3hdm4	99	57.795	Microtus_ochrogaster
ENSLACG00000016445	R3HDM4	100	62.595	ENSMMOG00000008253	r3hdm4	100	62.595	Mola_mola
ENSLACG00000016445	R3HDM4	89	68.559	ENSMODG00000005698	R3HDM4	99	68.559	Monodelphis_domestica
ENSLACG00000016445	R3HDM4	100	60.305	ENSMALG00000018856	r3hdm4	100	58.712	Monopterus_albus
ENSLACG00000016445	R3HDM4	99	57.414	MGP_CAROLIEiJ_G0015551	R3hdm4	99	57.414	Mus_caroli
ENSLACG00000016445	R3HDM4	99	57.034	ENSMUSG00000035781	R3hdm4	99	57.034	Mus_musculus
ENSLACG00000016445	R3HDM4	93	60.581	MGP_PahariEiJ_G0030964	R3hdm4	95	58.893	Mus_pahari
ENSLACG00000016445	R3HDM4	99	57.034	MGP_SPRETEiJ_G0016369	-	84	57.034	Mus_spretus
ENSLACG00000016445	R3HDM4	92	63.333	ENSMPUG00000009394	R3HDM4	89	63.333	Mustela_putorius_furo
ENSLACG00000016445	R3HDM4	100	59.924	ENSNBRG00000004438	r3hdm4	100	59.924	Neolamprologus_brichardi
ENSLACG00000016445	R3HDM4	87	59.307	ENSNLEG00000001022	R3HDM4	100	59.307	Nomascus_leucogenys
ENSLACG00000016445	R3HDM4	91	66.949	ENSMEUG00000011020	R3HDM4	99	66.949	Notamacropus_eugenii
ENSLACG00000016445	R3HDM4	97	59.921	ENSODEG00000011745	R3HDM4	94	59.921	Octodon_degus
ENSLACG00000016445	R3HDM4	100	60.305	ENSONIG00000012675	r3hdm4	92	60.305	Oreochromis_niloticus
ENSLACG00000016445	R3HDM4	100	61.069	ENSOMEG00000003005	r3hdm4	100	61.069	Oryzias_melastigma
ENSLACG00000016445	R3HDM4	93	61.826	ENSOGAG00000025656	R3HDM4	91	61.826	Otolemur_garnettii
ENSLACG00000016445	R3HDM4	93	61.317	ENSOARG00000009945	R3HDM4	99	61.317	Ovis_aries
ENSLACG00000016445	R3HDM4	100	59.004	ENSPPAG00000042371	R3HDM4	99	61.728	Pan_paniscus
ENSLACG00000016445	R3HDM4	97	60.236	ENSPANG00000015203	R3HDM4	95	60.236	Papio_anubis
ENSLACG00000016445	R3HDM4	100	58.801	ENSPKIG00000007421	r3hdm4	100	58.801	Paramormyrops_kingsleyae
ENSLACG00000016445	R3HDM4	100	57.414	ENSPMGG00000020467	r3hdm4	100	57.252	Periophthalmus_magnuspinnatus
ENSLACG00000016445	R3HDM4	93	60.996	ENSPEMG00000008365	Tmem259	99	60.996	Peromyscus_maniculatus_bairdii
ENSLACG00000016445	R3HDM4	100	61.832	ENSPFOG00000003199	r3hdm4	100	61.832	Poecilia_formosa
ENSLACG00000016445	R3HDM4	100	61.832	ENSPMEG00000014183	r3hdm4	100	61.832	Poecilia_mexicana
ENSLACG00000016445	R3HDM4	100	61.450	ENSPREG00000010709	r3hdm4	100	61.450	Poecilia_reticulata
ENSLACG00000016445	R3HDM4	93	61.983	ENSPPYG00000009297	R3HDM4	91	61.983	Pongo_abelii
ENSLACG00000016445	R3HDM4	59	59.868	ENSPCAG00000010997	R3HDM4	56	59.868	Procavia_capensis
ENSLACG00000016445	R3HDM4	94	61.633	ENSPCOG00000016785	R3HDM4	96	58.915	Propithecus_coquereli
ENSLACG00000016445	R3HDM4	100	60.305	ENSPNYG00000017489	r3hdm4	100	60.305	Pundamilia_nyererei
ENSLACG00000016445	R3HDM4	93	59.336	ENSRNOG00000011489	R3hdm4	95	58.103	Rattus_norvegicus
ENSLACG00000016445	R3HDM4	93	61.728	ENSRROG00000028842	R3HDM4	91	61.728	Rhinopithecus_roxellana
ENSLACG00000016445	R3HDM4	93	59.919	ENSSBOG00000019298	R3HDM4	72	59.919	Saimiri_boliviensis_boliviensis
ENSLACG00000016445	R3HDM4	57	68.493	ENSSHAG00000003036	-	100	68.493	Sarcophilus_harrisii
ENSLACG00000016445	R3HDM4	94	63.265	ENSSFOG00015020574	r3hdm4	94	61.719	Scleropages_formosus
ENSLACG00000016445	R3HDM4	100	59.542	ENSSMAG00000021090	r3hdm4	74	59.542	Scophthalmus_maximus
ENSLACG00000016445	R3HDM4	100	62.214	ENSSDUG00000008488	r3hdm4	100	62.214	Seriola_dumerili
ENSLACG00000016445	R3HDM4	100	62.214	ENSSLDG00000025328	r3hdm4	100	62.214	Seriola_lalandi_dorsalis
ENSLACG00000016445	R3HDM4	93	72.614	ENSSPUG00000005434	R3HDM4	95	72.614	Sphenodon_punctatus
ENSLACG00000016445	R3HDM4	99	58.621	ENSSPAG00000002562	r3hdm4	99	58.621	Stegastes_partitus
ENSLACG00000016445	R3HDM4	100	58.462	ENSSSCG00000013419	R3HDM4	96	58.462	Sus_scrofa
ENSLACG00000016445	R3HDM4	79	61.244	ENSTGUG00000000663	R3HDM4	100	61.244	Taeniopygia_guttata
ENSLACG00000016445	R3HDM4	93	60.905	ENSTTRG00000001470	R3HDM4	99	60.494	Tursiops_truncatus
ENSLACG00000016445	R3HDM4	94	56.379	ENSUAMG00000005751	R3HDM4	100	64.126	Ursus_americanus
ENSLACG00000016445	R3HDM4	94	62.449	ENSVVUG00000022685	R3HDM4	90	62.449	Vulpes_vulpes
ENSLACG00000016445	R3HDM4	97	48.450	ENSXETG00000033624	R3HDM4	97	48.617	Xenopus_tropicalis
ENSLACG00000016445	R3HDM4	100	61.977	ENSXCOG00000005127	r3hdm4	100	61.977	Xiphophorus_couchianus
ENSLACG00000016445	R3HDM4	100	62.214	ENSXMAG00000022875	r3hdm4	100	62.214	Xiphophorus_maculatus