EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000016447 (Gene tree)
Gene ID: 102362391
Gene Symbol: FSCN1
Alias: FLJ38511|SNL|p55
Full Name: fascin actin-bundling protein 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 36980 bases
Position: chrJH126684.1:1578347-1615326
Accession: 102362391
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018681	FRG1	PF06229.12	3.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000018814	FSCN1-201	2050	XM_005992319	ENSLACP00000018681	490 (aa)	XP_005992381	H3B9W0

Gene Model

Click here to download ENSLACG00000016447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016447	FSCN1	100	55.804	ENSACIG00000002025	fscn2b	100	55.804	Amphilophus_citrinellus
ENSLACG00000016447	FSCN1	64	69.585	ENSATEG00000005335	fscn1b	100	69.585	Anabas_testudineus
ENSLACG00000016447	FSCN1	100	55.804	ENSATEG00000013607	fscn2b	100	55.804	Anabas_testudineus
ENSLACG00000016447	FSCN1	100	59.674	ENSACAG00000015216	FSCN2	100	59.674	Anolis_carolinensis
ENSLACG00000016447	FSCN1	100	55.397	ENSACLG00000014453	fscn2b	100	55.397	Astatotilapia_calliptera
ENSLACG00000016447	FSCN1	99	77.642	ENSCSEG00000019160	fscn1a	99	77.642	Cynoglossus_semilaevis
ENSLACG00000016447	FSCN1	91	53.691	ENSCVAG00000018645	fscn2b	100	53.691	Cyprinodon_variegatus
ENSLACG00000016447	FSCN1	100	47.266	ENSEBUG00000014215	FSCN2	100	47.266	Eptatretus_burgeri
ENSLACG00000016447	FSCN1	100	75.911	ENSELUG00000011363	fscn1a	100	75.911	Esox_lucius
ENSLACG00000016447	FSCN1	100	61.518	ENSFALG00000012651	FSCN2	100	51.120	Ficedula_albicollis
ENSLACG00000016447	FSCN1	100	59.063	ENSGALG00000023354	FSCN2	100	59.063	Gallus_gallus
ENSLACG00000016447	FSCN1	98	70.186	ENSGAFG00000013512	fscn1b	98	70.186	Gambusia_affinis
ENSLACG00000016447	FSCN1	100	55.397	ENSHBUG00000021952	fscn2b	100	55.397	Haplochromis_burtoni
ENSLACG00000016447	FSCN1	100	58.248	ENSHCOG00000015421	fscn2a	100	58.248	Hippocampus_comes
ENSLACG00000016447	FSCN1	100	84.521	ENSLOCG00000004693	fscn1a	98	84.521	Lepisosteus_oculatus
ENSLACG00000016447	FSCN1	100	55.397	ENSMZEG00005009107	fscn2b	100	55.397	Maylandia_zebra
ENSLACG00000016447	FSCN1	100	55.397	ENSNBRG00000021249	fscn2b	100	55.397	Neolamprologus_brichardi
ENSLACG00000016447	FSCN1	100	55.804	ENSONIG00000019860	fscn2b	100	55.804	Oreochromis_niloticus
ENSLACG00000016447	FSCN1	98	70.600	ENSORLG00000009620	fscn1b	98	70.600	Oryzias_latipes
ENSLACG00000016447	FSCN1	98	70.186	ENSORLG00020010658	fscn1b	98	70.186	Oryzias_latipes_hni
ENSLACG00000016447	FSCN1	98	70.807	ENSORLG00015010020	fscn1b	98	70.807	Oryzias_latipes_hsok
ENSLACG00000016447	FSCN1	100	57.841	ENSOMEG00000008432	fscn2a	100	57.841	Oryzias_melastigma
ENSLACG00000016447	FSCN1	98	69.772	ENSOMEG00000019920	fscn1b	98	69.772	Oryzias_melastigma
ENSLACG00000016447	FSCN1	100	75.764	ENSPKIG00000010464	fscn1a	100	75.764	Paramormyrops_kingsleyae
ENSLACG00000016447	FSCN1	100	60.081	ENSPKIG00000013426	fscn2b	100	60.081	Paramormyrops_kingsleyae
ENSLACG00000016447	FSCN1	98	70.186	ENSPFOG00000011521	fscn1b	98	70.186	Poecilia_formosa
ENSLACG00000016447	FSCN1	98	69.979	ENSPLAG00000006140	fscn1b	98	69.979	Poecilia_latipinna
ENSLACG00000016447	FSCN1	98	70.186	ENSPMEG00000019975	fscn1b	98	70.186	Poecilia_mexicana
ENSLACG00000016447	FSCN1	100	55.397	ENSPNYG00000019474	fscn2b	100	55.397	Pundamilia_nyererei
ENSLACG00000016447	FSCN1	98	62.268	ENSPNAG00000014780	fscn1b	98	62.268	Pygocentrus_nattereri
ENSLACG00000016447	FSCN1	100	60.285	ENSSPUG00000014373	FSCN2	100	60.285	Sphenodon_punctatus
ENSLACG00000016447	FSCN1	100	87.551	ENSSPUG00000002887	FSCN1	100	87.551	Sphenodon_punctatus
ENSLACG00000016447	FSCN1	61	64.214	ENSTGUG00000014701	FSCN2	98	64.214	Taeniopygia_guttata
ENSLACG00000016447	FSCN1	100	56.823	ENSTRUG00000011674	fscn2a	100	56.823	Takifugu_rubripes
ENSLACG00000016447	FSCN1	99	73.577	ENSTRUG00000005218	fscn1a	99	73.577	Takifugu_rubripes
ENSLACG00000016447	FSCN1	100	56.619	ENSTNIG00000009778	fscn2a	99	56.619	Tetraodon_nigroviridis
ENSLACG00000016447	FSCN1	98	69.772	ENSXCOG00000005719	fscn1b	98	69.772	Xiphophorus_couchianus
ENSLACG00000016447	FSCN1	98	69.565	ENSXMAG00000012851	fscn1b	98	69.565	Xiphophorus_maculatus