EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000016475 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 840 bases
Position: chrJH126630.1:1586921-1587760
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018714	RVT_1	PF00078.27	5.4e-15	1	1
ENSLACP00000018715	RVT_1	PF00078.27	2.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000018847	-	510	-	ENSLACP00000018714	169 (aa)	-	H3B9Z3
ENSLACT00000018848	-	501	-	ENSLACP00000018715	167 (aa)	-	H3B9Z4

Gene Model

Click here to download ENSLACG00000016475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016475's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000016475	-	92	35.542	ENSLACG00000005904	-	58	35.542
ENSLACG00000016475	-	99	71.176	ENSLACG00000006250	-	99	71.176
ENSLACG00000016475	-	84	37.762	ENSLACG00000002617	-	81	37.762
ENSLACG00000016475	-	100	38.596	ENSLACG00000011328	-	73	38.596

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016475	-	98	44.970	ENSAPOG00000011439	-	52	44.970	Acanthochromis_polyacanthus
ENSLACG00000016475	-	96	31.707	ENSEBUG00000007520	-	64	31.707	Eptatretus_burgeri
ENSLACG00000016475	-	99	42.373	ENSPSIG00000000968	-	57	42.373	Pelodiscus_sinensis
ENSLACG00000016475	-	99	33.333	ENSPNYG00000002366	-	54	33.333	Pundamilia_nyererei