EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000016518 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 29918 bases
Position: chrJH126600.1:1603900-1633817
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018766	MMR_HSR1	PF01926.23	8.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000018899	-	948	-	ENSLACP00000018766	316 (aa)	-	H3BA45

Gene Model

Click here to download ENSLACG00000016518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000016518	-	50	33.540	ENSLACG00000016074	RAB39B	76	33.540
ENSLACG00000016518	-	51	37.500	ENSLACG00000012521	RAB2A	75	37.500
ENSLACG00000016518	-	50	37.342	ENSLACG00000011380	rab11al	73	37.342
ENSLACG00000016518	-	53	30.814	ENSLACG00000017799	RAB36	63	30.814
ENSLACG00000016518	-	58	39.459	ENSLACG00000005168	RAB6A	90	38.830
ENSLACG00000016518	-	50	36.943	ENSLACG00000016974	RAB11B	91	36.943
ENSLACG00000016518	-	50	37.975	ENSLACG00000010461	RAB12	63	37.975
ENSLACG00000016518	-	53	34.132	ENSLACG00000012717	RAB1B	82	34.545
ENSLACG00000016518	-	59	32.461	ENSLACG00000007092	RAB22A	98	32.461
ENSLACG00000016518	-	51	30.909	ENSLACG00000001081	RAB34	64	30.909
ENSLACG00000016518	-	59	32.990	ENSLACG00000004663	RAB5A	90	32.990
ENSLACG00000016518	-	53	33.918	ENSLACG00000015770	RAB7A	82	33.918
ENSLACG00000016518	-	53	32.948	ENSLACG00000008809	zgc:100918	83	32.749
ENSLACG00000016518	-	54	39.888	ENSLACG00000008103	-	97	39.888
ENSLACG00000016518	-	59	34.158	ENSLACG00000011157	RAB25	99	33.953
ENSLACG00000016518	-	58	38.919	ENSLACG00000013980	rab41	88	38.919
ENSLACG00000016518	-	50	36.943	ENSLACG00000016857	-	72	36.943
ENSLACG00000016518	-	51	35.000	ENSLACG00000011181	RAB14	74	35.000
ENSLACG00000016518	-	56	34.831	ENSLACG00000011557	zgc:101559	72	34.831
ENSLACG00000016518	-	60	32.487	ENSLACG00000012869	RAB1A	96	32.487
ENSLACG00000016518	-	59	32.474	ENSLACG00000013571	RAB33B	83	32.474
ENSLACG00000016518	-	50	34.969	ENSLACG00000002523	RAB29	79	34.969
ENSLACG00000016518	-	56	42.045	ENSLACG00000006407	RAB30	85	42.045
ENSLACG00000016518	-	59	39.683	ENSLACG00000022111	-	95	39.683
ENSLACG00000016518	-	50	35.976	ENSLACG00000002332	-	76	35.976

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016518	-	51	75.155	ENSACAG00000009389	-	96	75.155	Anolis_carolinensis
ENSLACG00000016518	-	53	72.619	ENSETEG00000005963	-	98	72.619	Echinops_telfairi
ENSLACG00000016518	-	51	57.407	ENSEEUG00000001438	-	97	57.407	Erinaceus_europaeus
ENSLACG00000016518	-	59	72.043	ENSGMOG00000006968	-	93	72.043	Gadus_morhua
ENSLACG00000016518	-	62	69.898	ENSGACG00000013611	-	91	73.118	Gasterosteus_aculeatus
ENSLACG00000016518	-	51	74.375	ENSMLUG00000016268	-	97	74.375	Myotis_lucifugus
ENSLACG00000016518	-	53	76.048	ENSMEUG00000015626	-	100	76.048	Notamacropus_eugenii
ENSLACG00000016518	-	51	74.691	ENSOPRG00000007436	-	95	74.691	Ochotona_princeps
ENSLACG00000016518	-	60	76.316	ENSPSIG00000008757	-	97	76.316	Pelodiscus_sinensis
ENSLACG00000016518	-	53	58.333	ENSPCAG00000001228	-	97	58.333	Procavia_capensis
ENSLACG00000016518	-	51	74.691	ENSSHAG00000006833	-	98	74.691	Sarcophilus_harrisii
ENSLACG00000016518	-	53	76.506	ENSTGUG00000013171	-	99	76.506	Taeniopygia_guttata
ENSLACG00000016518	-	51	70.807	ENSTTRG00000002070	-	93	70.807	Tursiops_truncatus