EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000016691 (Gene tree)
Gene ID: 102357350
Gene Symbol: EXOSC10
Alias: PM-Scl|PM/Scl-100|PMSCL2|RRP6|Rrp6p|p2|p3|p4
Full Name: exosome component 10
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 40676 bases
Position: chrJH126753.1:1685580-1726255
Accession: 102357350
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000018971	HRDC	PF00570.23	2.3e-11	1	1
ENSLACP00000018972	HRDC	PF00570.23	2.4e-11	1	1
ENSLACP00000018972	PMC2NT	PF08066.12	3.9e-23	1	1
ENSLACP00000018971	PMC2NT	PF08066.12	4.2e-23	1	1
ENSLACP00000018971	DNA_pol_A_exo1	PF01612.20	1.4e-45	1	1
ENSLACP00000018972	DNA_pol_A_exo1	PF01612.20	1.5e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000019105	EXOSC10-202	2733	-	ENSLACP00000018972	910 (aa)	-	H3BAQ1
ENSLACT00000019104	EXOSC10-201	2946	XM_005994003	ENSLACP00000018971	891 (aa)	XP_005994065	H3BAQ0

Gene Model

Click here to download ENSLACG00000016691's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016691's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016691	EXOSC10	100	67.667	ENSG00000171824	EXOSC10	100	69.291	Homo_sapiens
ENSLACG00000016691	EXOSC10	99	64.430	ENSAPOG00000013304	exosc10	99	64.318	Acanthochromis_polyacanthus
ENSLACG00000016691	EXOSC10	100	67.778	ENSAMEG00000009546	EXOSC10	100	67.222	Ailuropoda_melanoleuca
ENSLACG00000016691	EXOSC10	96	61.053	ENSACIG00000020455	exosc10	97	60.819	Amphilophus_citrinellus
ENSLACG00000016691	EXOSC10	99	61.356	ENSAOCG00000018823	exosc10	99	60.678	Amphiprion_ocellaris
ENSLACG00000016691	EXOSC10	99	64.094	ENSAPEG00000017786	exosc10	98	64.206	Amphiprion_percula
ENSLACG00000016691	EXOSC10	98	64.391	ENSATEG00000017271	exosc10	98	64.773	Anabas_testudineus
ENSLACG00000016691	EXOSC10	97	69.669	ENSAPLG00000006652	EXOSC10	100	69.327	Anas_platyrhynchos
ENSLACG00000016691	EXOSC10	100	63.385	ENSANAG00000031112	EXOSC10	100	63.053	Aotus_nancymaae
ENSLACG00000016691	EXOSC10	98	63.110	ENSACLG00000025226	exosc10	99	62.235	Astatotilapia_calliptera
ENSLACG00000016691	EXOSC10	100	62.227	ENSAMXG00000014510	exosc10	100	62.118	Astyanax_mexicanus
ENSLACG00000016691	EXOSC10	77	72.532	ENSBTAG00000002590	EXOSC10	99	72.429	Bos_taurus
ENSLACG00000016691	EXOSC10	61	36.036	WBGene00000796	crn-3	61	36.036	Caenorhabditis_elegans
ENSLACG00000016691	EXOSC10	100	67.220	ENSCJAG00000002327	EXOSC10	100	66.925	Callithrix_jacchus
ENSLACG00000016691	EXOSC10	97	69.099	ENSCAFG00000016721	EXOSC10	95	68.643	Canis_familiaris
ENSLACG00000016691	EXOSC10	97	69.099	ENSCAFG00020002481	EXOSC10	95	68.643	Canis_lupus_dingo
ENSLACG00000016691	EXOSC10	100	65.440	ENSCHIG00000020022	EXOSC10	100	64.994	Capra_hircus
ENSLACG00000016691	EXOSC10	100	63.204	ENSTSYG00000006937	EXOSC10	100	62.873	Carlito_syrichta
ENSLACG00000016691	EXOSC10	96	68.060	ENSCAPG00000006494	EXOSC10	99	67.746	Cavia_aperea
ENSLACG00000016691	EXOSC10	97	68.301	ENSCPOG00000011628	EXOSC10	98	66.325	Cavia_porcellus
ENSLACG00000016691	EXOSC10	100	63.077	ENSCCAG00000023223	EXOSC10	100	67.607	Cebus_capucinus
ENSLACG00000016691	EXOSC10	100	67.222	ENSCATG00000039000	EXOSC10	100	67.000	Cercocebus_atys
ENSLACG00000016691	EXOSC10	100	66.333	ENSCLAG00000005283	EXOSC10	100	66.000	Chinchilla_lanigera
ENSLACG00000016691	EXOSC10	100	67.111	ENSCSAG00000000788	EXOSC10	100	66.889	Chlorocebus_sabaeus
ENSLACG00000016691	EXOSC10	86	70.855	ENSCHOG00000012713	EXOSC10	87	70.596	Choloepus_hoffmanni
ENSLACG00000016691	EXOSC10	99	71.809	ENSCPBG00000022004	EXOSC10	99	71.365	Chrysemys_picta_bellii
ENSLACG00000016691	EXOSC10	65	48.054	ENSCSAVG00000009049	-	99	48.229	Ciona_savignyi
ENSLACG00000016691	EXOSC10	100	67.000	ENSCANG00000042813	EXOSC10	100	66.778	Colobus_angolensis_palliatus
ENSLACG00000016691	EXOSC10	99	67.005	ENSCGRG00001018469	Exosc10	99	66.216	Cricetulus_griseus_chok1gshd
ENSLACG00000016691	EXOSC10	99	66.779	ENSCGRG00000002278	Exosc10	99	65.991	Cricetulus_griseus_crigri
ENSLACG00000016691	EXOSC10	99	63.352	ENSCSEG00000005346	exosc10	98	63.352	Cynoglossus_semilaevis
ENSLACG00000016691	EXOSC10	97	65.178	ENSCVAG00000016429	exosc10	98	64.773	Cyprinodon_variegatus
ENSLACG00000016691	EXOSC10	97	61.080	ENSDARG00000037708	exosc10	100	60.521	Danio_rerio
ENSLACG00000016691	EXOSC10	97	69.056	ENSDNOG00000011301	EXOSC10	99	68.373	Dasypus_novemcinctus
ENSLACG00000016691	EXOSC10	100	63.333	ENSDORG00000003769	Exosc10	100	63.000	Dipodomys_ordii
ENSLACG00000016691	EXOSC10	91	34.130	FBgn0038269	Rrp6	93	33.788	Drosophila_melanogaster
ENSLACG00000016691	EXOSC10	95	66.473	ENSETEG00000000830	EXOSC10	99	66.357	Echinops_telfairi
ENSLACG00000016691	EXOSC10	72	34.700	ENSEBUG00000004395	exosc10	99	35.196	Eptatretus_burgeri
ENSLACG00000016691	EXOSC10	99	67.525	ENSEASG00005018716	EXOSC10	99	76.150	Equus_asinus_asinus
ENSLACG00000016691	EXOSC10	100	67.517	ENSECAG00000011639	EXOSC10	100	67.295	Equus_caballus
ENSLACG00000016691	EXOSC10	82	69.219	ENSEEUG00000001166	EXOSC10	86	69.219	Erinaceus_europaeus
ENSLACG00000016691	EXOSC10	97	63.501	ENSELUG00000012870	exosc10	96	63.501	Esox_lucius
ENSLACG00000016691	EXOSC10	99	67.494	ENSFCAG00000000052	EXOSC10	99	67.269	Felis_catus
ENSLACG00000016691	EXOSC10	99	65.746	ENSFALG00000010287	EXOSC10	99	65.414	Ficedula_albicollis
ENSLACG00000016691	EXOSC10	99	67.411	ENSFDAG00000002942	EXOSC10	99	67.076	Fukomys_damarensis
ENSLACG00000016691	EXOSC10	99	62.290	ENSFHEG00000010678	exosc10	99	62.851	Fundulus_heteroclitus
ENSLACG00000016691	EXOSC10	84	67.712	ENSGMOG00000006131	exosc10	87	67.712	Gadus_morhua
ENSLACG00000016691	EXOSC10	99	68.282	ENSGALG00000003086	EXOSC10	99	67.731	Gallus_gallus
ENSLACG00000016691	EXOSC10	97	63.417	ENSGAFG00000019222	exosc10	98	62.916	Gambusia_affinis
ENSLACG00000016691	EXOSC10	99	63.281	ENSGACG00000007037	exosc10	99	63.281	Gasterosteus_aculeatus
ENSLACG00000016691	EXOSC10	99	72.475	ENSGAGG00000000251	EXOSC10	100	73.342	Gopherus_agassizii
ENSLACG00000016691	EXOSC10	100	67.556	ENSGGOG00000010572	EXOSC10	100	67.333	Gorilla_gorilla
ENSLACG00000016691	EXOSC10	98	59.529	ENSHBUG00000020328	exosc10	99	58.655	Haplochromis_burtoni
ENSLACG00000016691	EXOSC10	99	67.299	ENSHGLG00000011944	EXOSC10	99	67.299	Heterocephalus_glaber_female
ENSLACG00000016691	EXOSC10	99	67.299	ENSHGLG00100014444	EXOSC10	99	67.299	Heterocephalus_glaber_male
ENSLACG00000016691	EXOSC10	98	61.287	ENSHCOG00000016164	exosc10	97	61.392	Hippocampus_comes
ENSLACG00000016691	EXOSC10	98	61.417	ENSIPUG00000021971	exosc10	100	60.570	Ictalurus_punctatus
ENSLACG00000016691	EXOSC10	99	68.616	ENSSTOG00000005459	EXOSC10	99	68.279	Ictidomys_tridecemlineatus
ENSLACG00000016691	EXOSC10	99	67.829	ENSJJAG00000013716	Exosc10	99	67.604	Jaculus_jaculus
ENSLACG00000016691	EXOSC10	99	64.182	ENSKMAG00000015540	exosc10	99	63.920	Kryptolebias_marmoratus
ENSLACG00000016691	EXOSC10	99	63.667	ENSLBEG00000022229	exosc10	99	63.929	Labrus_bergylta
ENSLACG00000016691	EXOSC10	100	68.950	ENSLOCG00000006443	exosc10	99	68.508	Lepisosteus_oculatus
ENSLACG00000016691	EXOSC10	99	68.315	ENSLAFG00000016894	EXOSC10	99	68.202	Loxodonta_africana
ENSLACG00000016691	EXOSC10	100	67.222	ENSMFAG00000038874	EXOSC10	100	65.667	Macaca_fascicularis
ENSLACG00000016691	EXOSC10	100	67.222	ENSMMUG00000019322	EXOSC10	100	67.000	Macaca_mulatta
ENSLACG00000016691	EXOSC10	100	67.222	ENSMNEG00000035812	EXOSC10	100	67.000	Macaca_nemestrina
ENSLACG00000016691	EXOSC10	100	67.222	ENSMLEG00000025160	EXOSC10	100	67.000	Mandrillus_leucophaeus
ENSLACG00000016691	EXOSC10	98	62.997	ENSMAMG00000019375	exosc10	99	63.152	Mastacembelus_armatus
ENSLACG00000016691	EXOSC10	98	63.110	ENSMZEG00005013730	exosc10	99	62.235	Maylandia_zebra
ENSLACG00000016691	EXOSC10	96	69.400	ENSMGAG00000004665	EXOSC10	99	68.822	Meleagris_gallopavo
ENSLACG00000016691	EXOSC10	67	74.793	ENSMAUG00000019261	Exosc10	97	74.793	Mesocricetus_auratus
ENSLACG00000016691	EXOSC10	99	67.982	ENSMICG00000003858	EXOSC10	99	67.644	Microcebus_murinus
ENSLACG00000016691	EXOSC10	67	74.793	ENSMOCG00000016509	Exosc10	97	74.793	Microtus_ochrogaster
ENSLACG00000016691	EXOSC10	99	61.055	ENSMMOG00000009265	exosc10	99	60.494	Mola_mola
ENSLACG00000016691	EXOSC10	97	69.575	ENSMODG00000011194	EXOSC10	100	67.853	Monodelphis_domestica
ENSLACG00000016691	EXOSC10	99	64.382	ENSMALG00000021322	exosc10	98	64.085	Monopterus_albus
ENSLACG00000016691	EXOSC10	100	66.224	MGP_CAROLIEiJ_G0026802	Exosc10	97	74.129	Mus_caroli
ENSLACG00000016691	EXOSC10	100	65.778	ENSMUSG00000017264	Exosc10	97	73.964	Mus_musculus
ENSLACG00000016691	EXOSC10	100	66.482	MGP_PahariEiJ_G0029150	Exosc10	97	74.295	Mus_pahari
ENSLACG00000016691	EXOSC10	100	65.889	MGP_SPRETEiJ_G0027795	Exosc10	97	73.964	Mus_spretus
ENSLACG00000016691	EXOSC10	99	68.315	ENSMPUG00000016434	EXOSC10	96	67.978	Mustela_putorius_furo
ENSLACG00000016691	EXOSC10	99	68.263	ENSMLUG00000004276	EXOSC10	99	68.040	Myotis_lucifugus
ENSLACG00000016691	EXOSC10	100	67.111	ENSNGAG00000023829	Exosc10	100	67.000	Nannospalax_galili
ENSLACG00000016691	EXOSC10	98	61.213	ENSNBRG00000006256	exosc10	97	61.327	Neolamprologus_brichardi
ENSLACG00000016691	EXOSC10	99	67.077	ENSNLEG00000009539	EXOSC10	99	66.965	Nomascus_leucogenys
ENSLACG00000016691	EXOSC10	60	81.633	ENSMEUG00000007020	-	66	81.081	Notamacropus_eugenii
ENSLACG00000016691	EXOSC10	97	67.691	ENSOPRG00000012091	EXOSC10	98	67.122	Ochotona_princeps
ENSLACG00000016691	EXOSC10	97	68.650	ENSODEG00000013285	EXOSC10	97	68.421	Octodon_degus
ENSLACG00000016691	EXOSC10	85	64.798	ENSONIG00000002322	exosc10	98	64.917	Oreochromis_niloticus
ENSLACG00000016691	EXOSC10	97	66.366	ENSOANG00000013322	EXOSC10	98	66.140	Ornithorhynchus_anatinus
ENSLACG00000016691	EXOSC10	97	67.771	ENSOCUG00000013039	EXOSC10	98	67.540	Oryctolagus_cuniculus
ENSLACG00000016691	EXOSC10	98	64.068	ENSORLG00000005117	exosc10	100	64.417	Oryzias_latipes
ENSLACG00000016691	EXOSC10	98	64.487	ENSORLG00020013529	exosc10	98	64.221	Oryzias_latipes_hni
ENSLACG00000016691	EXOSC10	98	64.487	ENSORLG00015005525	exosc10	98	64.221	Oryzias_latipes_hsok
ENSLACG00000016691	EXOSC10	98	63.698	ENSOMEG00000003337	exosc10	98	63.318	Oryzias_melastigma
ENSLACG00000016691	EXOSC10	98	62.909	ENSOGAG00000013662	EXOSC10	99	62.570	Otolemur_garnettii
ENSLACG00000016691	EXOSC10	100	67.956	ENSOARG00000003668	EXOSC10	100	67.735	Ovis_aries
ENSLACG00000016691	EXOSC10	100	67.295	ENSPPAG00000038356	EXOSC10	100	67.184	Pan_paniscus
ENSLACG00000016691	EXOSC10	99	67.833	ENSPPRG00000022976	EXOSC10	99	67.269	Panthera_pardus
ENSLACG00000016691	EXOSC10	94	67.414	ENSPTIG00000012735	EXOSC10	97	66.627	Panthera_tigris_altaica
ENSLACG00000016691	EXOSC10	100	64.071	ENSPTRG00000000140	EXOSC10	100	63.849	Pan_troglodytes
ENSLACG00000016691	EXOSC10	100	66.333	ENSPANG00000026088	EXOSC10	100	66.111	Papio_anubis
ENSLACG00000016691	EXOSC10	100	61.487	ENSPKIG00000013098	exosc10	98	62.000	Paramormyrops_kingsleyae
ENSLACG00000016691	EXOSC10	99	71.173	ENSPSIG00000005078	EXOSC10	98	70.950	Pelodiscus_sinensis
ENSLACG00000016691	EXOSC10	65	70.934	ENSPMGG00000022241	exosc10	98	70.740	Periophthalmus_magnuspinnatus
ENSLACG00000016691	EXOSC10	78	72.365	ENSPEMG00000007753	Exosc10	97	72.222	Peromyscus_maniculatus_bairdii
ENSLACG00000016691	EXOSC10	55	53.239	ENSPMAG00000006909	exosc10	100	53.239	Petromyzon_marinus
ENSLACG00000016691	EXOSC10	91	66.828	ENSPCIG00000004840	EXOSC10	91	76.440	Phascolarctos_cinereus
ENSLACG00000016691	EXOSC10	99	63.046	ENSPFOG00000004744	exosc10	99	62.374	Poecilia_formosa
ENSLACG00000016691	EXOSC10	99	62.822	ENSPLAG00000010253	exosc10	99	62.150	Poecilia_latipinna
ENSLACG00000016691	EXOSC10	99	63.046	ENSPMEG00000005740	exosc10	99	62.374	Poecilia_mexicana
ENSLACG00000016691	EXOSC10	99	62.332	ENSPREG00000016285	exosc10	99	64.690	Poecilia_reticulata
ENSLACG00000016691	EXOSC10	98	67.458	ENSPPYG00000001891	EXOSC10	96	67.232	Pongo_abelii
ENSLACG00000016691	EXOSC10	83	68.203	ENSPCAG00000001583	EXOSC10	93	67.886	Procavia_capensis
ENSLACG00000016691	EXOSC10	99	68.249	ENSPCOG00000013742	EXOSC10	99	67.910	Propithecus_coquereli
ENSLACG00000016691	EXOSC10	100	67.817	ENSPVAG00000014780	EXOSC10	100	67.483	Pteropus_vampyrus
ENSLACG00000016691	EXOSC10	98	63.110	ENSPNYG00000007387	exosc10	99	62.235	Pundamilia_nyererei
ENSLACG00000016691	EXOSC10	99	61.648	ENSPNAG00000028864	exosc10	100	61.472	Pygocentrus_nattereri
ENSLACG00000016691	EXOSC10	100	66.260	ENSRNOG00000010719	Exosc10	100	66.149	Rattus_norvegicus
ENSLACG00000016691	EXOSC10	100	59.558	ENSRBIG00000039772	EXOSC10	100	59.337	Rhinopithecus_bieti
ENSLACG00000016691	EXOSC10	100	67.444	ENSRROG00000036700	EXOSC10	100	67.222	Rhinopithecus_roxellana
ENSLACG00000016691	EXOSC10	60	33.577	YOR001W	-	68	33.577	Saccharomyces_cerevisiae
ENSLACG00000016691	EXOSC10	97	63.345	ENSSBOG00000020768	EXOSC10	99	63.158	Saimiri_boliviensis_boliviensis
ENSLACG00000016691	EXOSC10	96	68.801	ENSSHAG00000013572	EXOSC10	100	68.452	Sarcophilus_harrisii
ENSLACG00000016691	EXOSC10	95	62.980	ENSSFOG00015004512	exosc10	98	62.165	Scleropages_formosus
ENSLACG00000016691	EXOSC10	99	63.382	ENSSMAG00000017318	exosc10	99	63.494	Scophthalmus_maximus
ENSLACG00000016691	EXOSC10	99	64.214	ENSSDUG00000006646	exosc10	99	64.326	Seriola_dumerili
ENSLACG00000016691	EXOSC10	100	63.415	ENSSLDG00000025554	exosc10	100	63.525	Seriola_lalandi_dorsalis
ENSLACG00000016691	EXOSC10	82	53.970	ENSSARG00000013171	EXOSC10	100	53.970	Sorex_araneus
ENSLACG00000016691	EXOSC10	96	72.643	ENSSPUG00000006844	EXOSC10	99	75.753	Sphenodon_punctatus
ENSLACG00000016691	EXOSC10	100	64.191	ENSSPAG00000007053	exosc10	100	64.302	Stegastes_partitus
ENSLACG00000016691	EXOSC10	90	68.512	ENSSSCG00000003412	EXOSC10	100	68.344	Sus_scrofa
ENSLACG00000016691	EXOSC10	96	66.899	ENSTGUG00000002231	EXOSC10	100	66.318	Taeniopygia_guttata
ENSLACG00000016691	EXOSC10	98	61.258	ENSTRUG00000012484	exosc10	98	61.229	Takifugu_rubripes
ENSLACG00000016691	EXOSC10	98	63.470	ENSTNIG00000015181	exosc10	99	63.061	Tetraodon_nigroviridis
ENSLACG00000016691	EXOSC10	71	82.734	ENSTBEG00000017471	-	70	82.734	Tupaia_belangeri
ENSLACG00000016691	EXOSC10	100	68.187	ENSTTRG00000001320	EXOSC10	100	67.853	Tursiops_truncatus
ENSLACG00000016691	EXOSC10	93	70.000	ENSUAMG00000014404	EXOSC10	96	69.643	Ursus_americanus
ENSLACG00000016691	EXOSC10	97	66.667	ENSUMAG00000023413	EXOSC10	99	70.043	Ursus_maritimus
ENSLACG00000016691	EXOSC10	61	79.853	ENSVPAG00000004629	EXOSC10	62	79.853	Vicugna_pacos
ENSLACG00000016691	EXOSC10	90	68.305	ENSVVUG00000027116	EXOSC10	100	67.813	Vulpes_vulpes
ENSLACG00000016691	EXOSC10	97	60.476	ENSXETG00000006318	exosc10	100	60.476	Xenopus_tropicalis
ENSLACG00000016691	EXOSC10	97	63.501	ENSXCOG00000004665	exosc10	97	63.574	Xiphophorus_couchianus
ENSLACG00000016691	EXOSC10	97	63.170	ENSXMAG00000011246	exosc10	97	62.942	Xiphophorus_maculatus