EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000016798 (Gene tree)
Gene ID: -
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 6417 bases
Position: chrJH126574.1:1739797-1746213
Accession: 18585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000019090	RRM_1	PF00076.22	2.2e-18	1	1
ENSLACP00000019089	RRM_1	PF00076.22	5.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000019222	MSI2-201	303	-	ENSLACP00000019089	101 (aa)	-	H3BB18
ENSLACT00000019223	MSI2-202	279	-	ENSLACP00000019090	93 (aa)	-	H3BB19

Gene Model

Click here to download ENSLACG00000016798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016798's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000016798	MSI2	83	40.476	ENSLACG00000011242	-	53	40.476
ENSLACG00000016798	MSI2	81	61.842	ENSLACG00000005306	HNRNPD	50	61.842
ENSLACG00000016798	MSI2	95	54.255	ENSLACG00000015227	HNRNPAB	52	60.000
ENSLACG00000016798	MSI2	83	45.238	ENSLACG00000013590	HNRNPA2B1	56	45.238
ENSLACG00000016798	MSI2	82	44.706	ENSLACG00000014480	HNRNPA0	54	44.706
ENSLACG00000016798	MSI2	90	31.765	ENSLACG00000016601	elavl3	75	31.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016798	MSI2	100	97.030	ENSG00000153944	MSI2	91	94.444	Homo_sapiens
ENSLACG00000016798	MSI2	98	92.308	ENSAPOG00000001658	msi2a	55	92.941	Acanthochromis_polyacanthus
ENSLACG00000016798	MSI2	89	96.471	ENSAMEG00000002697	MSI2	52	96.471	Ailuropoda_melanoleuca
ENSLACG00000016798	MSI2	89	94.444	ENSATEG00000003301	-	50	94.444	Anabas_testudineus
ENSLACG00000016798	MSI2	98	92.308	ENSATEG00000010498	msi2a	55	92.941	Anabas_testudineus
ENSLACG00000016798	MSI2	100	97.030	ENSANAG00000037827	MSI2	73	97.030	Aotus_nancymaae
ENSLACG00000016798	MSI2	98	92.308	ENSACLG00000007752	msi2a	55	92.941	Astatotilapia_calliptera
ENSLACG00000016798	MSI2	98	93.407	ENSAMXG00000032796	msi2a	51	95.294	Astyanax_mexicanus
ENSLACG00000016798	MSI2	98	95.604	ENSAMXG00000010474	msi2b	61	91.089	Astyanax_mexicanus
ENSLACG00000016798	MSI2	100	97.030	ENSBTAG00000004406	MSI2	58	97.030	Bos_taurus
ENSLACG00000016798	MSI2	89	71.765	WBGene00003423	msi-1	53	71.765	Caenorhabditis_elegans
ENSLACG00000016798	MSI2	100	97.030	ENSCJAG00000013998	MSI2	73	97.030	Callithrix_jacchus
ENSLACG00000016798	MSI2	89	97.143	ENSCAFG00020025620	MSI2	51	97.143	Canis_lupus_dingo
ENSLACG00000016798	MSI2	98	89.011	ENSCHIG00000016580	MSI2	51	95.294	Capra_hircus
ENSLACG00000016798	MSI2	89	75.862	ENSCPOG00000034042	MSI2	50	75.862	Cavia_porcellus
ENSLACG00000016798	MSI2	100	97.030	ENSCCAG00000033927	MSI2	73	97.030	Cebus_capucinus
ENSLACG00000016798	MSI2	100	97.030	ENSCATG00000040879	MSI2	73	97.030	Cercocebus_atys
ENSLACG00000016798	MSI2	98	93.407	ENSCLAG00000014325	MSI2	71	93.407	Chinchilla_lanigera
ENSLACG00000016798	MSI2	98	93.407	ENSCSAG00000005633	MSI2	51	95.294	Chlorocebus_sabaeus
ENSLACG00000016798	MSI2	75	87.179	ENSCHOG00000008660	MSI2	55	69.565	Choloepus_hoffmanni
ENSLACG00000016798	MSI2	89	100.000	ENSCPBG00000009942	MSI2	57	100.000	Chrysemys_picta_bellii
ENSLACG00000016798	MSI2	91	60.638	ENSCSAVG00000010397	-	57	60.638	Ciona_savignyi
ENSLACG00000016798	MSI2	100	97.030	ENSCANG00000036414	MSI2	73	97.030	Colobus_angolensis_palliatus
ENSLACG00000016798	MSI2	98	92.308	ENSCGRG00001013330	Msi2	64	92.308	Cricetulus_griseus_chok1gshd
ENSLACG00000016798	MSI2	89	96.667	ENSCGRG00000003141	Msi2	52	96.667	Cricetulus_griseus_crigri
ENSLACG00000016798	MSI2	98	92.308	ENSCSEG00000013549	msi2a	51	92.308	Cynoglossus_semilaevis
ENSLACG00000016798	MSI2	98	92.308	ENSCVAG00000017075	msi2a	55	92.941	Cyprinodon_variegatus
ENSLACG00000016798	MSI2	98	95.604	ENSDARG00000032614	msi2b	100	98.148	Danio_rerio
ENSLACG00000016798	MSI2	89	98.438	ENSDNOG00000014501	MSI2	51	98.438	Dasypus_novemcinctus
ENSLACG00000016798	MSI2	82	96.386	ENSDORG00000028440	-	73	96.386	Dipodomys_ordii
ENSLACG00000016798	MSI2	89	75.294	FBgn0260943	Rbp6	52	44.444	Drosophila_melanogaster
ENSLACG00000016798	MSI2	100	100.000	ENSEASG00005002965	MSI2	51	97.143	Equus_asinus_asinus
ENSLACG00000016798	MSI2	98	93.407	ENSECAG00000011435	MSI2	53	95.294	Equus_caballus
ENSLACG00000016798	MSI2	98	93.478	ENSELUG00000001361	msi2b	54	93.478	Esox_lucius
ENSLACG00000016798	MSI2	98	95.604	ENSELUG00000011747	msi2a	63	92.079	Esox_lucius
ENSLACG00000016798	MSI2	98	73.626	ENSFCAG00000033787	-	71	82.278	Felis_catus
ENSLACG00000016798	MSI2	100	97.030	ENSFCAG00000041686	MSI2	91	94.444	Felis_catus
ENSLACG00000016798	MSI2	89	96.429	ENSFDAG00000016118	MSI2	51	96.429	Fukomys_damarensis
ENSLACG00000016798	MSI2	98	92.308	ENSFHEG00000000084	msi2a	84	92.308	Fundulus_heteroclitus
ENSLACG00000016798	MSI2	98	93.407	ENSGMOG00000007596	-	88	93.407	Gadus_morhua
ENSLACG00000016798	MSI2	98	92.308	ENSGAFG00000006974	msi2a	78	94.048	Gambusia_affinis
ENSLACG00000016798	MSI2	100	97.030	ENSGGOG00000013182	MSI2	73	97.030	Gorilla_gorilla
ENSLACG00000016798	MSI2	98	92.308	ENSHBUG00000020800	msi2a	55	92.941	Haplochromis_burtoni
ENSLACG00000016798	MSI2	98	93.407	ENSHGLG00000012444	MSI2	66	93.407	Heterocephalus_glaber_female
ENSLACG00000016798	MSI2	82	96.386	ENSHGLG00100004028	-	63	96.386	Heterocephalus_glaber_male
ENSLACG00000016798	MSI2	98	93.407	ENSIPUG00000003732	msi2b	53	77.778	Ictalurus_punctatus
ENSLACG00000016798	MSI2	98	91.209	ENSIPUG00000021097	msi2a	55	94.118	Ictalurus_punctatus
ENSLACG00000016798	MSI2	89	75.862	ENSSTOG00000007884	MSI2	50	75.862	Ictidomys_tridecemlineatus
ENSLACG00000016798	MSI2	82	96.386	ENSJJAG00000009467	-	73	96.386	Jaculus_jaculus
ENSLACG00000016798	MSI2	98	92.308	ENSKMAG00000009494	msi2a	52	91.765	Kryptolebias_marmoratus
ENSLACG00000016798	MSI2	100	91.089	ENSLBEG00000007061	msi2a	59	92.308	Labrus_bergylta
ENSLACG00000016798	MSI2	98	95.604	ENSLOCG00000004675	msi2b	74	95.604	Lepisosteus_oculatus
ENSLACG00000016798	MSI2	100	97.030	ENSMFAG00000003775	MSI2	73	97.030	Macaca_fascicularis
ENSLACG00000016798	MSI2	100	97.030	ENSMMUG00000002069	MSI2	73	97.030	Macaca_mulatta
ENSLACG00000016798	MSI2	100	97.030	ENSMNEG00000045275	MSI2	73	97.030	Macaca_nemestrina
ENSLACG00000016798	MSI2	100	97.030	ENSMLEG00000033888	MSI2	73	97.030	Mandrillus_leucophaeus
ENSLACG00000016798	MSI2	98	91.209	ENSMAMG00000002488	-	86	92.941	Mastacembelus_armatus
ENSLACG00000016798	MSI2	100	90.323	ENSMAMG00000010503	msi2a	58	92.308	Mastacembelus_armatus
ENSLACG00000016798	MSI2	98	92.308	ENSMZEG00005007676	msi2a	55	92.941	Maylandia_zebra
ENSLACG00000016798	MSI2	100	97.030	ENSMICG00000013598	-	73	97.030	Microcebus_murinus
ENSLACG00000016798	MSI2	98	81.319	ENSMICG00000032913	-	59	81.319	Microcebus_murinus
ENSLACG00000016798	MSI2	100	90.099	ENSMMOG00000008348	msi2a	76	92.754	Mola_mola
ENSLACG00000016798	MSI2	98	92.308	ENSMALG00000000071	msi2a	55	92.941	Monopterus_albus
ENSLACG00000016798	MSI2	98	92.308	MGP_CAROLIEiJ_G0016948	Msi2	73	96.386	Mus_caroli
ENSLACG00000016798	MSI2	98	92.308	ENSMUSG00000069769	Msi2	73	96.386	Mus_musculus
ENSLACG00000016798	MSI2	98	92.308	MGP_PahariEiJ_G0018079	Msi2	73	96.386	Mus_pahari
ENSLACG00000016798	MSI2	98	92.308	MGP_SPRETEiJ_G0017795	Msi2	73	96.386	Mus_spretus
ENSLACG00000016798	MSI2	100	97.030	ENSMPUG00000015377	MSI2	57	97.030	Mustela_putorius_furo
ENSLACG00000016798	MSI2	100	95.050	ENSMLUG00000007865	MSI2	57	95.050	Myotis_lucifugus
ENSLACG00000016798	MSI2	98	92.308	ENSNBRG00000014596	msi2a	80	92.941	Neolamprologus_brichardi
ENSLACG00000016798	MSI2	89	97.101	ENSNLEG00000008059	MSI2	70	97.101	Nomascus_leucogenys
ENSLACG00000016798	MSI2	98	92.308	ENSONIG00000001972	msi2a	73	92.941	Oreochromis_niloticus
ENSLACG00000016798	MSI2	100	96.040	ENSOCUG00000010440	MSI2	57	96.040	Oryctolagus_cuniculus
ENSLACG00000016798	MSI2	98	92.308	ENSORLG00000009671	msi2a	55	92.941	Oryzias_latipes
ENSLACG00000016798	MSI2	100	91.089	ENSORLG00020021556	msi2a	55	92.941	Oryzias_latipes_hni
ENSLACG00000016798	MSI2	98	92.308	ENSORLG00015004592	msi2a	55	92.941	Oryzias_latipes_hsok
ENSLACG00000016798	MSI2	98	92.308	ENSOMEG00000000146	msi2a	55	92.941	Oryzias_melastigma
ENSLACG00000016798	MSI2	84	96.471	ENSOGAG00000005621	MSI2	54	96.471	Otolemur_garnettii
ENSLACG00000016798	MSI2	100	97.030	ENSPPAG00000037697	MSI2	73	97.030	Pan_paniscus
ENSLACG00000016798	MSI2	100	97.030	ENSPPRG00000001848	MSI2	73	97.030	Panthera_pardus
ENSLACG00000016798	MSI2	89	97.101	ENSPTIG00000021678	MSI2	61	97.101	Panthera_tigris_altaica
ENSLACG00000016798	MSI2	98	61.616	ENSPTIG00000021873	-	70	61.616	Panthera_tigris_altaica
ENSLACG00000016798	MSI2	100	97.030	ENSPTRG00000009437	MSI2	73	97.030	Pan_troglodytes
ENSLACG00000016798	MSI2	100	97.030	ENSPANG00000022319	MSI2	73	97.030	Papio_anubis
ENSLACG00000016798	MSI2	100	96.774	ENSPKIG00000017107	-	82	96.774	Paramormyrops_kingsleyae
ENSLACG00000016798	MSI2	98	90.110	ENSPKIG00000007038	-	52	92.941	Paramormyrops_kingsleyae
ENSLACG00000016798	MSI2	82	96.386	ENSPEMG00000021793	-	73	96.386	Peromyscus_maniculatus_bairdii
ENSLACG00000016798	MSI2	98	92.308	ENSPFOG00000019337	MSI2	78	92.308	Poecilia_formosa
ENSLACG00000016798	MSI2	98	92.308	ENSPLAG00000000436	msi2a	52	92.308	Poecilia_latipinna
ENSLACG00000016798	MSI2	100	97.030	ENSPCOG00000019195	-	100	97.030	Propithecus_coquereli
ENSLACG00000016798	MSI2	89	97.101	ENSPVAG00000017053	MSI2	52	97.101	Pteropus_vampyrus
ENSLACG00000016798	MSI2	98	92.308	ENSPNYG00000018393	msi2a	55	92.941	Pundamilia_nyererei
ENSLACG00000016798	MSI2	98	95.604	ENSPNAG00000000844	msi2b	54	82.353	Pygocentrus_nattereri
ENSLACG00000016798	MSI2	98	92.308	ENSPNAG00000014957	msi2a	51	94.118	Pygocentrus_nattereri
ENSLACG00000016798	MSI2	89	98.148	ENSRNOG00000025338	Msi2	50	98.148	Rattus_norvegicus
ENSLACG00000016798	MSI2	100	77.660	ENSRBIG00000032064	-	85	77.660	Rhinopithecus_bieti
ENSLACG00000016798	MSI2	100	97.030	ENSRROG00000034421	-	76	97.030	Rhinopithecus_roxellana
ENSLACG00000016798	MSI2	100	97.030	ENSSBOG00000026425	MSI2	73	97.030	Saimiri_boliviensis_boliviensis
ENSLACG00000016798	MSI2	89	97.590	ENSSHAG00000008672	MSI2	51	97.590	Sarcophilus_harrisii
ENSLACG00000016798	MSI2	89	90.588	ENSSFOG00015021687	-	57	90.588	Scleropages_formosus
ENSLACG00000016798	MSI2	98	92.308	ENSSMAG00000018484	msi2a	55	92.941	Scophthalmus_maximus
ENSLACG00000016798	MSI2	98	92.308	ENSSDUG00000014507	msi2a	59	92.308	Seriola_dumerili
ENSLACG00000016798	MSI2	98	91.209	ENSSDUG00000021968	-	86	92.941	Seriola_dumerili
ENSLACG00000016798	MSI2	98	92.308	ENSSLDG00000017172	msi2a	55	92.941	Seriola_lalandi_dorsalis
ENSLACG00000016798	MSI2	98	80.220	ENSSLDG00000021332	-	68	80.220	Seriola_lalandi_dorsalis
ENSLACG00000016798	MSI2	98	96.703	ENSSPUG00000000913	-	83	96.703	Sphenodon_punctatus
ENSLACG00000016798	MSI2	98	92.308	ENSSPAG00000017793	msi2a	55	92.941	Stegastes_partitus
ENSLACG00000016798	MSI2	100	97.030	ENSSSCG00000038505	MSI2	54	97.030	Sus_scrofa
ENSLACG00000016798	MSI2	98	92.308	ENSTRUG00000021248	msi2a	50	74.490	Takifugu_rubripes
ENSLACG00000016798	MSI2	98	69.231	ENSTBEG00000001241	MSI2	52	72.727	Tupaia_belangeri
ENSLACG00000016798	MSI2	100	97.030	ENSUAMG00000000700	MSI2	73	97.030	Ursus_americanus
ENSLACG00000016798	MSI2	89	98.148	ENSUMAG00000000505	MSI2	54	98.148	Ursus_maritimus
ENSLACG00000016798	MSI2	98	89.011	ENSXCOG00000006113	msi2a	54	67.327	Xiphophorus_couchianus
ENSLACG00000016798	MSI2	98	92.308	ENSXMAG00000000608	msi2a	55	92.941	Xiphophorus_maculatus