EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000016958 (Gene tree)
Gene ID: 102356108
Gene Symbol: -
Alias: -
Full Name: ras-related protein M-Ras-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 24771 bases
Position: chrJH126700.1:1822713-1847483
Accession: 102356108
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000019277	GTP_EFTU	PF00009.27	1.1e-06	1	1
ENSLACP00000022161	GTP_EFTU	PF00009.27	1.1e-06	1	1
ENSLACP00000022161	MMR_HSR1	PF01926.23	8.9e-05	1	1
ENSLACP00000019277	MMR_HSR1	PF01926.23	9.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000025974	-	1419	XM_005992823	ENSLACP00000022161	207 (aa)	XP_014342040	M3XHF5
ENSLACT00000019411	-	627	-	ENSLACP00000019277	208 (aa)	-	H3BBK6

Gene Model

Click here to download ENSLACG00000016958's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm04010	MAPK signaling pathway	KEGG
lcm04137	Mitophagy - animal	KEGG
lcm04140	Autophagy - animal	KEGG
lcm04218	Cellular senescence	KEGG
lcm04371	Apelin signaling pathway	KEGG
lcm04625	C-type lectin receptor signaling pathway	KEGG
lcm04810	Regulation of actin cytoskeleton	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016958's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000016958	-	71	34.228	ENSLACG00000011557	zgc:101559	65	34.228
ENSLACG00000016958	-	70	40.972	ENSLACG00000012088	rheb	78	40.972
ENSLACG00000016958	-	87	30.220	ENSLACG00000012717	RAB1B	90	30.220
ENSLACG00000016958	-	89	31.016	ENSLACG00000012869	RAB1A	89	31.016
ENSLACG00000016958	-	77	31.056	ENSLACG00000007092	RAB22A	82	31.056
ENSLACG00000016958	-	81	50.898	ENSLACG00000018427	HRAS	88	50.595
ENSLACG00000016958	-	76	31.902	ENSLACG00000015770	RAB7A	78	31.902
ENSLACG00000016958	-	88	30.435	ENSLACG00000002332	-	84	30.435
ENSLACG00000016958	-	81	34.682	ENSLACG00000008103	-	94	34.682
ENSLACG00000016958	-	94	30.151	ENSLACG00000011256	rab18b	95	30.151
ENSLACG00000016958	-	96	31.500	ENSLACG00000022111	-	97	31.500
ENSLACG00000016958	-	84	31.250	ENSLACG00000012674	si:dkey-34d22.5	82	31.609
ENSLACG00000016958	-	83	50.867	ENSLACG00000018428	NRAS	89	50.867
ENSLACG00000016958	-	88	31.579	ENSLACG00000011380	rab11al	86	31.579
ENSLACG00000016958	-	90	31.771	ENSLACG00000009310	rab18a	92	31.771
ENSLACG00000016958	-	71	33.557	ENSLACG00000013571	RAB33B	74	33.333
ENSLACG00000016958	-	96	31.188	ENSLACG00000006407	RAB30	98	31.188
ENSLACG00000016958	-	83	35.057	ENSLACG00000016974	RAB11B	98	35.057
ENSLACG00000016958	-	77	42.857	ENSLACG00000014985	RAP2B	92	43.931
ENSLACG00000016958	-	81	33.529	ENSLACG00000012755	-	80	33.529
ENSLACG00000016958	-	76	31.447	ENSLACG00000010461	RAB12	63	31.447
ENSLACG00000016958	-	77	30.864	ENSLACG00000001282	-	77	30.864
ENSLACG00000016958	-	77	46.250	ENSLACG00000010885	-	100	46.250
ENSLACG00000016958	-	94	31.658	ENSLACG00000003581	rasd3	96	31.658
ENSLACG00000016958	-	57	35.833	ENSLACG00000001664	NKIRAS1	63	35.833
ENSLACG00000016958	-	76	33.529	ENSLACG00000014614	si:dkey-27j5.5	61	33.529
ENSLACG00000016958	-	94	32.487	ENSLACG00000012184	RAB11A	87	32.487
ENSLACG00000016958	-	79	31.515	ENSLACG00000014446	RAB2B	99	31.515
ENSLACG00000016958	-	79	30.539	ENSLACG00000017799	RAB36	62	30.723
ENSLACG00000016958	-	79	30.000	ENSLACG00000008809	zgc:100918	82	30.000
ENSLACG00000016958	-	85	31.844	ENSLACG00000011157	RAB25	82	31.844
ENSLACG00000016958	-	83	51.445	ENSLACG00000013122	RRAS2	93	50.932
ENSLACG00000016958	-	75	31.410	ENSLACG00000013980	rab41	73	31.410
ENSLACG00000016958	-	88	34.737	ENSLACG00000016857	-	85	34.737
ENSLACG00000016958	-	76	31.902	ENSLACG00000017891	RAB9B	76	31.902
ENSLACG00000016958	-	100	63.942	ENSLACG00000010042	-	100	64.423
ENSLACG00000016958	-	93	33.333	ENSLACG00000016074	RAB39B	89	33.333
ENSLACG00000016958	-	86	48.603	ENSLACG00000017464	KRAS	100	47.208
ENSLACG00000016958	-	73	52.980	ENSLACG00000017138	RRAS	93	53.374
ENSLACG00000016958	-	86	30.000	ENSLACG00000011181	RAB14	82	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016958	-	100	62.500	ENSG00000158186	MRAS	100	67.290	Homo_sapiens
ENSLACG00000016958	-	100	57.692	ENSAPOG00000001356	si:ch73-116o1.2	100	57.692	Acanthochromis_polyacanthus
ENSLACG00000016958	-	100	62.500	ENSAMEG00000006368	MRAS	100	62.981	Ailuropoda_melanoleuca
ENSLACG00000016958	-	72	64.000	ENSACIG00000015128	si:ch73-116o1.2	100	50.725	Amphilophus_citrinellus
ENSLACG00000016958	-	100	57.692	ENSAOCG00000017207	si:ch73-116o1.2	100	57.692	Amphiprion_ocellaris
ENSLACG00000016958	-	100	57.692	ENSAPEG00000008940	si:ch73-116o1.2	100	57.692	Amphiprion_percula
ENSLACG00000016958	-	100	57.692	ENSATEG00000012108	si:ch73-116o1.2	100	57.692	Anabas_testudineus
ENSLACG00000016958	-	100	63.942	ENSAPLG00000013435	MRAS	100	64.423	Anas_platyrhynchos
ENSLACG00000016958	-	100	63.942	ENSACAG00000003841	MRAS	100	64.423	Anolis_carolinensis
ENSLACG00000016958	-	100	62.500	ENSANAG00000033185	MRAS	100	62.981	Aotus_nancymaae
ENSLACG00000016958	-	100	57.692	ENSACLG00000007804	si:ch73-116o1.2	100	57.692	Astatotilapia_calliptera
ENSLACG00000016958	-	100	60.096	ENSAMXG00000033764	si:ch73-116o1.2	100	60.096	Astyanax_mexicanus
ENSLACG00000016958	-	100	59.135	ENSAMXG00000010919	mras	100	59.135	Astyanax_mexicanus
ENSLACG00000016958	-	100	62.019	ENSBTAG00000001497	MRAS	100	62.500	Bos_taurus
ENSLACG00000016958	-	100	62.500	ENSCJAG00000044294	MRAS	100	62.981	Callithrix_jacchus
ENSLACG00000016958	-	100	62.500	ENSCAFG00000007541	MRAS	100	62.981	Canis_familiaris
ENSLACG00000016958	-	100	62.500	ENSCAFG00020008087	MRAS	100	62.981	Canis_lupus_dingo
ENSLACG00000016958	-	100	62.019	ENSCHIG00000025837	MRAS	100	62.500	Capra_hircus
ENSLACG00000016958	-	100	62.500	ENSCAPG00000013338	MRAS	100	62.981	Cavia_aperea
ENSLACG00000016958	-	100	62.019	ENSCPOG00000034906	MRAS	100	62.500	Cavia_porcellus
ENSLACG00000016958	-	100	62.500	ENSCCAG00000035799	-	100	62.981	Cebus_capucinus
ENSLACG00000016958	-	100	62.500	ENSCATG00000043690	MRAS	100	62.981	Cercocebus_atys
ENSLACG00000016958	-	100	61.538	ENSCLAG00000002057	MRAS	100	62.019	Chinchilla_lanigera
ENSLACG00000016958	-	100	62.500	ENSCSAG00000011005	MRAS	100	62.981	Chlorocebus_sabaeus
ENSLACG00000016958	-	100	63.942	ENSCPBG00000013681	MRAS	100	64.423	Chrysemys_picta_bellii
ENSLACG00000016958	-	100	62.500	ENSCANG00000031708	MRAS	100	62.981	Colobus_angolensis_palliatus
ENSLACG00000016958	-	100	62.500	ENSCGRG00001019182	Mras	100	62.981	Cricetulus_griseus_chok1gshd
ENSLACG00000016958	-	100	62.500	ENSCGRG00000005782	Mras	100	62.981	Cricetulus_griseus_crigri
ENSLACG00000016958	-	100	58.173	ENSCSEG00000018987	si:ch73-116o1.2	100	58.173	Cynoglossus_semilaevis
ENSLACG00000016958	-	100	57.692	ENSCVAG00000008389	si:ch73-116o1.2	100	57.692	Cyprinodon_variegatus
ENSLACG00000016958	-	100	58.654	ENSDARG00000075285	si:ch73-116o1.2	100	58.654	Danio_rerio
ENSLACG00000016958	-	99	57.488	ENSDARG00000062865	mras	100	60.326	Danio_rerio
ENSLACG00000016958	-	100	62.019	ENSDORG00000025032	Mras	100	62.019	Dipodomys_ordii
ENSLACG00000016958	-	100	62.500	ENSETEG00000016304	MRAS	100	62.981	Echinops_telfairi
ENSLACG00000016958	-	88	62.366	ENSEBUG00000014186	-	81	63.536	Eptatretus_burgeri
ENSLACG00000016958	-	100	62.500	ENSEASG00005003778	MRAS	100	62.981	Equus_asinus_asinus
ENSLACG00000016958	-	100	62.500	ENSECAG00000018736	MRAS	100	62.981	Equus_caballus
ENSLACG00000016958	-	100	60.577	ENSEEUG00000007832	MRAS	100	61.058	Erinaceus_europaeus
ENSLACG00000016958	-	100	59.135	ENSELUG00000017558	mras	100	59.135	Esox_lucius
ENSLACG00000016958	-	100	58.852	ENSELUG00000005090	si:ch73-116o1.2	88	58.852	Esox_lucius
ENSLACG00000016958	-	100	62.500	ENSFCAG00000026623	MRAS	100	62.981	Felis_catus
ENSLACG00000016958	-	100	63.942	ENSFALG00000013196	MRAS	100	64.423	Ficedula_albicollis
ENSLACG00000016958	-	100	62.981	ENSFDAG00000019759	MRAS	100	63.462	Fukomys_damarensis
ENSLACG00000016958	-	100	57.692	ENSFHEG00000004875	si:ch73-116o1.2	100	57.692	Fundulus_heteroclitus
ENSLACG00000016958	-	85	66.857	ENSGMOG00000012623	si:ch73-116o1.2	100	66.857	Gadus_morhua
ENSLACG00000016958	-	100	63.942	ENSGALG00000011592	MRAS	100	64.423	Gallus_gallus
ENSLACG00000016958	-	100	58.173	ENSGAFG00000018295	si:ch73-116o1.2	100	58.173	Gambusia_affinis
ENSLACG00000016958	-	100	57.692	ENSGACG00000007818	si:ch73-116o1.2	100	57.692	Gasterosteus_aculeatus
ENSLACG00000016958	-	100	64.734	ENSGAGG00000020094	MRAS	100	64.904	Gopherus_agassizii
ENSLACG00000016958	-	100	62.500	ENSGGOG00000011092	MRAS	100	62.981	Gorilla_gorilla
ENSLACG00000016958	-	100	57.692	ENSHBUG00000017973	si:ch73-116o1.2	100	57.692	Haplochromis_burtoni
ENSLACG00000016958	-	100	62.500	ENSHGLG00000014208	MRAS	100	62.981	Heterocephalus_glaber_female
ENSLACG00000016958	-	100	62.500	ENSHGLG00100015232	MRAS	100	62.981	Heterocephalus_glaber_male
ENSLACG00000016958	-	100	58.173	ENSHCOG00000018456	si:ch73-116o1.2	100	58.173	Hippocampus_comes
ENSLACG00000016958	-	100	60.096	ENSIPUG00000013954	rasm	100	60.096	Ictalurus_punctatus
ENSLACG00000016958	-	100	60.577	ENSIPUG00000000962	MRAS	100	60.577	Ictalurus_punctatus
ENSLACG00000016958	-	100	62.500	ENSSTOG00000012534	MRAS	100	62.981	Ictidomys_tridecemlineatus
ENSLACG00000016958	-	100	62.019	ENSJJAG00000003840	Mras	100	62.500	Jaculus_jaculus
ENSLACG00000016958	-	100	57.212	ENSKMAG00000017893	mras	100	57.212	Kryptolebias_marmoratus
ENSLACG00000016958	-	100	58.173	ENSLBEG00000025705	si:ch73-116o1.2	100	58.173	Labrus_bergylta
ENSLACG00000016958	-	100	63.462	ENSLOCG00000001886	mras	99	64.423	Lepisosteus_oculatus
ENSLACG00000016958	-	100	61.722	ENSLAFG00000010809	MRAS	100	62.201	Loxodonta_africana
ENSLACG00000016958	-	100	62.500	ENSMFAG00000040143	MRAS	100	62.981	Macaca_fascicularis
ENSLACG00000016958	-	100	62.500	ENSMMUG00000007756	MRAS	100	62.981	Macaca_mulatta
ENSLACG00000016958	-	100	62.500	ENSMNEG00000029621	MRAS	100	62.981	Macaca_nemestrina
ENSLACG00000016958	-	100	62.500	ENSMLEG00000034659	MRAS	100	62.981	Mandrillus_leucophaeus
ENSLACG00000016958	-	100	57.692	ENSMAMG00000013700	si:ch73-116o1.2	100	57.692	Mastacembelus_armatus
ENSLACG00000016958	-	100	57.692	ENSMZEG00005001534	si:ch73-116o1.2	100	57.692	Maylandia_zebra
ENSLACG00000016958	-	100	64.423	ENSMGAG00000011812	MRAS	100	64.904	Meleagris_gallopavo
ENSLACG00000016958	-	100	62.500	ENSMAUG00000010837	Mras	100	62.981	Mesocricetus_auratus
ENSLACG00000016958	-	100	62.981	ENSMICG00000049226	MRAS	100	63.462	Microcebus_murinus
ENSLACG00000016958	-	100	62.500	ENSMOCG00000000582	Mras	100	62.981	Microtus_ochrogaster
ENSLACG00000016958	-	100	62.019	ENSMODG00000018565	MRAS	100	62.500	Monodelphis_domestica
ENSLACG00000016958	-	100	57.692	ENSMALG00000012930	si:ch73-116o1.2	100	57.692	Monopterus_albus
ENSLACG00000016958	-	100	63.462	MGP_CAROLIEiJ_G0032562	Mras	100	63.462	Mus_caroli
ENSLACG00000016958	-	100	62.981	ENSMUSG00000032470	Mras	100	62.981	Mus_musculus
ENSLACG00000016958	-	100	63.462	MGP_PahariEiJ_G0015431	Mras	100	63.462	Mus_pahari
ENSLACG00000016958	-	100	63.462	MGP_SPRETEiJ_G0033706	Mras	100	63.462	Mus_spretus
ENSLACG00000016958	-	100	62.019	ENSMPUG00000009182	MRAS	100	62.500	Mustela_putorius_furo
ENSLACG00000016958	-	69	63.194	ENSMLUG00000007927	MRAS	100	63.889	Myotis_lucifugus
ENSLACG00000016958	-	100	62.019	ENSNGAG00000013556	Mras	100	62.500	Nannospalax_galili
ENSLACG00000016958	-	100	57.692	ENSNBRG00000014613	si:ch73-116o1.2	100	57.692	Neolamprologus_brichardi
ENSLACG00000016958	-	100	62.019	ENSNLEG00000004197	MRAS	100	62.500	Nomascus_leucogenys
ENSLACG00000016958	-	94	52.239	ENSMEUG00000003081	-	100	52.736	Notamacropus_eugenii
ENSLACG00000016958	-	100	62.500	ENSODEG00000018151	MRAS	100	62.981	Octodon_degus
ENSLACG00000016958	-	100	56.604	ENSONIG00000004448	si:ch73-116o1.2	100	56.604	Oreochromis_niloticus
ENSLACG00000016958	-	69	63.194	ENSOANG00000007543	MRAS	100	63.889	Ornithorhynchus_anatinus
ENSLACG00000016958	-	100	62.500	ENSOCUG00000005929	MRAS	100	62.981	Oryctolagus_cuniculus
ENSLACG00000016958	-	100	56.938	ENSORLG00000018119	si:ch73-116o1.2	100	56.938	Oryzias_latipes
ENSLACG00000016958	-	100	57.212	ENSORLG00020012306	si:ch73-116o1.2	100	57.212	Oryzias_latipes_hni
ENSLACG00000016958	-	100	57.212	ENSORLG00015008252	si:ch73-116o1.2	100	57.212	Oryzias_latipes_hsok
ENSLACG00000016958	-	100	62.679	ENSOGAG00000004034	MRAS	100	63.158	Otolemur_garnettii
ENSLACG00000016958	-	100	61.722	ENSOARG00000007444	MRAS	100	62.201	Ovis_aries
ENSLACG00000016958	-	100	62.500	ENSPPAG00000036377	MRAS	100	62.981	Pan_paniscus
ENSLACG00000016958	-	100	62.500	ENSPPRG00000005624	MRAS	100	62.981	Panthera_pardus
ENSLACG00000016958	-	100	62.500	ENSPTIG00000019813	MRAS	100	62.981	Panthera_tigris_altaica
ENSLACG00000016958	-	100	62.500	ENSPTRG00000015445	MRAS	100	62.981	Pan_troglodytes
ENSLACG00000016958	-	100	62.500	ENSPANG00000007201	MRAS	100	62.981	Papio_anubis
ENSLACG00000016958	-	86	64.804	ENSPKIG00000019227	-	75	64.804	Paramormyrops_kingsleyae
ENSLACG00000016958	-	100	63.942	ENSPSIG00000009592	MRAS	100	64.423	Pelodiscus_sinensis
ENSLACG00000016958	-	100	62.019	ENSPCIG00000006467	MRAS	100	62.500	Phascolarctos_cinereus
ENSLACG00000016958	-	100	58.173	ENSPFOG00000000601	si:ch73-116o1.2	100	58.173	Poecilia_formosa
ENSLACG00000016958	-	100	58.173	ENSPLAG00000011855	si:ch73-116o1.2	100	58.173	Poecilia_latipinna
ENSLACG00000016958	-	100	58.173	ENSPMEG00000012042	si:ch73-116o1.2	100	58.173	Poecilia_mexicana
ENSLACG00000016958	-	100	58.173	ENSPREG00000016102	si:ch73-116o1.2	100	58.173	Poecilia_reticulata
ENSLACG00000016958	-	100	62.500	ENSPPYG00000014142	MRAS	100	62.981	Pongo_abelii
ENSLACG00000016958	-	100	62.019	ENSPCOG00000023517	MRAS	100	62.500	Propithecus_coquereli
ENSLACG00000016958	-	100	57.692	ENSPNYG00000005416	si:ch73-116o1.2	100	57.692	Pundamilia_nyererei
ENSLACG00000016958	-	100	60.577	ENSPNAG00000026295	si:ch73-116o1.2	100	60.577	Pygocentrus_nattereri
ENSLACG00000016958	-	100	59.135	ENSPNAG00000013747	mras	100	59.135	Pygocentrus_nattereri
ENSLACG00000016958	-	100	62.981	ENSRNOG00000014060	Mras	100	62.981	Rattus_norvegicus
ENSLACG00000016958	-	100	62.500	ENSRBIG00000038196	MRAS	100	62.981	Rhinopithecus_bieti
ENSLACG00000016958	-	100	62.500	ENSRROG00000029485	MRAS	100	62.981	Rhinopithecus_roxellana
ENSLACG00000016958	-	100	62.019	ENSSBOG00000023115	MRAS	100	62.500	Saimiri_boliviensis_boliviensis
ENSLACG00000016958	-	100	62.019	ENSSHAG00000009032	MRAS	100	62.019	Sarcophilus_harrisii
ENSLACG00000016958	-	100	60.287	ENSSFOG00015020319	mras	100	61.244	Scleropages_formosus
ENSLACG00000016958	-	100	58.654	ENSSMAG00000004806	si:ch73-116o1.2	100	58.654	Scophthalmus_maximus
ENSLACG00000016958	-	89	62.500	ENSSDUG00000010675	si:ch73-116o1.2	91	59.091	Seriola_dumerili
ENSLACG00000016958	-	100	57.212	ENSSLDG00000021833	si:ch73-116o1.2	100	57.212	Seriola_lalandi_dorsalis
ENSLACG00000016958	-	100	62.019	ENSSPUG00000017750	MRAS	100	62.500	Sphenodon_punctatus
ENSLACG00000016958	-	100	62.019	ENSSSCG00000027443	MRAS	100	62.500	Sus_scrofa
ENSLACG00000016958	-	100	63.942	ENSTGUG00000004727	MRAS	100	64.423	Taeniopygia_guttata
ENSLACG00000016958	-	100	58.173	ENSTRUG00000005805	mras	100	58.173	Takifugu_rubripes
ENSLACG00000016958	-	100	57.692	ENSTNIG00000007566	si:ch73-116o1.2	100	57.692	Tetraodon_nigroviridis
ENSLACG00000016958	-	85	66.857	ENSTTRG00000006194	MRAS	100	66.857	Tursiops_truncatus
ENSLACG00000016958	-	100	62.500	ENSUAMG00000008388	MRAS	100	62.981	Ursus_americanus
ENSLACG00000016958	-	99	62.927	ENSUMAG00000014965	MRAS	86	63.415	Ursus_maritimus
ENSLACG00000016958	-	100	62.500	ENSVVUG00000026571	-	100	62.981	Vulpes_vulpes
ENSLACG00000016958	-	100	62.019	ENSXETG00000005505	MRAS	100	62.019	Xenopus_tropicalis
ENSLACG00000016958	-	100	58.173	ENSXMAG00000001962	si:ch73-116o1.2	100	58.173	Xiphophorus_maculatus