EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000016962 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1743 bases
Position: chrJH126746.1:1831468-1833210
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000019281	RVT_1	PF00078.27	1.6e-22	1	1
ENSLACP00000019282	RVT_1	PF00078.27	1.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000019416	-	723	-	ENSLACP00000019282	241 (aa)	-	H3BBL1
ENSLACT00000019415	-	1716	-	ENSLACP00000019281	572 (aa)	-	H3BBL0

Gene Model

Click here to download ENSLACG00000016962's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016962's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000016962	-	93	67.411	ENSLACG00000005758	-	94	64.356
ENSLACG00000016962	-	100	80.894	ENSLACG00000011106	-	99	82.061
ENSLACG00000016962	-	100	63.306	ENSLACG00000004832	-	95	45.488
ENSLACG00000016962	-	99	78.689	ENSLACG00000013546	-	97	78.261
ENSLACG00000016962	-	91	77.170	ENSLACG00000013633	-	99	77.170
ENSLACG00000016962	-	98	31.979	ENSLACG00000004233	-	84	32.042
ENSLACG00000016962	-	100	79.675	ENSLACG00000012377	-	59	59.646
ENSLACG00000016962	-	100	37.805	ENSLACG00000001271	-	85	34.651
ENSLACG00000016962	-	99	85.789	ENSLACG00000006107	-	92	85.789
ENSLACG00000016962	-	100	79.268	ENSLACG00000008392	-	99	80.534
ENSLACG00000016962	-	100	81.707	ENSLACG00000010696	-	100	80.000
ENSLACG00000016962	-	82	83.686	ENSLACG00000001539	-	95	83.686
ENSLACG00000016962	-	100	81.377	ENSLACG00000006083	-	94	82.292
ENSLACG00000016962	-	100	39.184	ENSLACG00000012911	-	82	35.575

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016962	-	100	40.244	ENSACLG00000017606	-	53	34.446	Astatotilapia_calliptera
ENSLACG00000016962	-	100	39.837	ENSACLG00000013139	-	62	33.919	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.244	ENSACLG00000025178	-	58	34.513	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.244	ENSACLG00000022388	-	50	34.446	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.650	ENSACLG00000013967	-	54	34.622	Astatotilapia_calliptera
ENSLACG00000016962	-	100	39.919	ENSACLG00000017392	-	51	34.326	Astatotilapia_calliptera
ENSLACG00000016962	-	100	39.837	ENSACLG00000004963	-	71	34.336	Astatotilapia_calliptera
ENSLACG00000016962	-	100	41.057	ENSACLG00000009148	-	59	34.798	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.244	ENSACLG00000011507	-	50	34.446	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.244	ENSACLG00000016079	-	53	34.446	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.244	ENSACLG00000013574	-	58	34.446	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.244	ENSACLG00000017721	-	71	34.271	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.650	ENSACLG00000002775	-	55	34.798	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.650	ENSACLG00000013988	-	53	34.622	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.244	ENSACLG00000006057	-	72	34.622	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.244	ENSACLG00000013632	-	50	34.446	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.244	ENSACLG00000014121	-	50	34.446	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.244	ENSACLG00000007447	-	50	34.798	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.650	ENSACLG00000021406	-	63	34.622	Astatotilapia_calliptera
ENSLACG00000016962	-	100	39.837	ENSACLG00000002396	-	50	33.919	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.650	ENSACLG00000003607	-	54	34.336	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.244	ENSACLG00000007511	-	50	34.155	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.244	ENSACLG00000018006	-	59	34.622	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.244	ENSACLG00000005419	-	70	34.271	Astatotilapia_calliptera
ENSLACG00000016962	-	100	39.431	ENSACLG00000003757	-	50	34.271	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.244	ENSACLG00000021830	-	64	34.331	Astatotilapia_calliptera
ENSLACG00000016962	-	100	39.837	ENSACLG00000021834	-	53	34.622	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.244	ENSACLG00000019948	-	50	34.271	Astatotilapia_calliptera
ENSLACG00000016962	-	100	40.244	ENSMZEG00005028496	-	55	34.446	Maylandia_zebra
ENSLACG00000016962	-	100	39.024	ENSORLG00000023099	-	59	34.615	Oryzias_latipes
ENSLACG00000016962	-	98	33.972	ENSORLG00000022216	-	66	34.904	Oryzias_latipes
ENSLACG00000016962	-	100	38.710	ENSORLG00000023528	-	70	35.182	Oryzias_latipes
ENSLACG00000016962	-	100	39.024	ENSORLG00000028038	-	50	34.441	Oryzias_latipes
ENSLACG00000016962	-	100	38.211	ENSORLG00000026631	-	50	34.266	Oryzias_latipes
ENSLACG00000016962	-	100	38.618	ENSORLG00000028072	-	62	34.441	Oryzias_latipes
ENSLACG00000016962	-	98	33.624	ENSORLG00000025660	-	65	34.555	Oryzias_latipes
ENSLACG00000016962	-	100	39.024	ENSORLG00000027125	-	62	35.079	Oryzias_latipes
ENSLACG00000016962	-	100	39.024	ENSORLG00000025841	-	51	34.441	Oryzias_latipes
ENSLACG00000016962	-	100	39.024	ENSORLG00020006197	-	65	34.904	Oryzias_latipes_hni
ENSLACG00000016962	-	100	39.024	ENSORLG00020004983	-	52	34.441	Oryzias_latipes_hni
ENSLACG00000016962	-	100	39.024	ENSORLG00020010783	-	50	35.079	Oryzias_latipes_hni
ENSLACG00000016962	-	100	38.618	ENSORLG00020020703	-	62	34.729	Oryzias_latipes_hni
ENSLACG00000016962	-	100	39.024	ENSORLG00020020895	-	62	34.441	Oryzias_latipes_hni
ENSLACG00000016962	-	100	37.805	ENSPREG00000022240	-	50	33.916	Poecilia_reticulata
ENSLACG00000016962	-	100	38.618	ENSXMAG00000021428	-	65	34.446	Xiphophorus_maculatus