EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000016974 (Gene tree)
Gene ID: 102363815
Gene Symbol: RAB11B
Alias: H-YPT3
Full Name: ras-related protein Rab-11B
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 19733 bases
Position: chrJH126613.1:1837160-1856892
Accession: 102363815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000019298	MMR_HSR1	PF01926.23	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000019432	RAB11B-201	1645	XM_005989856	ENSLACP00000019298	172 (aa)	XP_005989918	H3BBM7

Gene Model

Click here to download ENSLACG00000016974's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000016974	RAB11B	84	34.247	ENSLACG00000018793	RAN	96	34.247
ENSLACG00000016974	RAB11B	89	39.103	ENSLACG00000017799	RAB36	58	39.103
ENSLACG00000016974	RAB11B	69	36.667	ENSLACG00000010885	-	76	37.931
ENSLACG00000016974	RAB11B	85	33.113	ENSLACG00000014985	RAP2B	86	34.969
ENSLACG00000016974	RAB11B	91	35.669	ENSLACG00000013980	rab41	74	35.669
ENSLACG00000016974	RAB11B	93	46.250	ENSLACG00000006407	RAB30	79	46.250
ENSLACG00000016974	RAB11B	96	44.578	ENSLACG00000011256	rab18b	80	44.578
ENSLACG00000016974	RAB11B	92	48.447	ENSLACG00000016074	RAB39B	76	48.447
ENSLACG00000016974	RAB11B	92	47.799	ENSLACG00000009310	rab18a	77	47.799
ENSLACG00000016974	RAB11B	94	54.658	ENSLACG00000012717	RAB1B	80	54.658
ENSLACG00000016974	RAB11B	91	34.177	ENSLACG00000012088	rheb	85	34.177
ENSLACG00000016974	RAB11B	91	36.943	ENSLACG00000016518	-	50	36.943
ENSLACG00000016974	RAB11B	96	49.102	ENSLACG00000002332	-	78	49.102
ENSLACG00000016974	RAB11B	85	34.014	ENSLACG00000017464	KRAS	84	34.591
ENSLACG00000016974	RAB11B	90	40.645	ENSLACG00000022111	-	78	40.645
ENSLACG00000016974	RAB11B	92	39.877	ENSLACG00000013571	RAB33B	75	38.150
ENSLACG00000016974	RAB11B	93	56.875	ENSLACG00000012521	RAB2A	75	56.875
ENSLACG00000016974	RAB11B	85	34.694	ENSLACG00000018427	HRAS	83	35.849
ENSLACG00000016974	RAB11B	85	34.014	ENSLACG00000018428	NRAS	83	35.220
ENSLACG00000016974	RAB11B	91	49.045	ENSLACG00000004663	RAB5A	73	49.045
ENSLACG00000016974	RAB11B	91	44.937	ENSLACG00000010461	RAB12	63	44.937
ENSLACG00000016974	RAB11B	70	49.593	ENSLACG00000018444	RAB35	61	49.593
ENSLACG00000016974	RAB11B	83	36.620	ENSLACG00000004025	RAB23	68	37.267
ENSLACG00000016974	RAB11B	98	35.057	ENSLACG00000016958	-	83	35.057
ENSLACG00000016974	RAB11B	99	100.000	ENSLACG00000016857	-	78	100.000
ENSLACG00000016974	RAB11B	85	31.293	ENSLACG00000013122	RRAS2	83	31.361
ENSLACG00000016974	RAB11B	94	36.905	ENSLACG00000002523	RAB29	81	36.905
ENSLACG00000016974	RAB11B	94	54.321	ENSLACG00000014446	RAB2B	98	54.321
ENSLACG00000016974	RAB11B	99	88.824	ENSLACG00000011380	rab11al	78	88.824
ENSLACG00000016974	RAB11B	92	39.877	ENSLACG00000008809	zgc:100918	79	39.877
ENSLACG00000016974	RAB11B	91	43.478	ENSLACG00000017891	RAB9B	75	43.478
ENSLACG00000016974	RAB11B	94	42.945	ENSLACG00000012755	-	77	42.945
ENSLACG00000016974	RAB11B	91	36.306	ENSLACG00000003722	rabl2	68	36.306
ENSLACG00000016974	RAB11B	92	47.239	ENSLACG00000008103	-	89	47.239
ENSLACG00000016974	RAB11B	96	53.939	ENSLACG00000012869	RAB1A	80	53.939
ENSLACG00000016974	RAB11B	92	39.877	ENSLACG00000015770	RAB7A	78	39.877
ENSLACG00000016974	RAB11B	95	36.747	ENSLACG00000010042	-	79	36.747
ENSLACG00000016974	RAB11B	73	31.783	ENSLACG00000003905	ARL4D	63	31.783
ENSLACG00000016974	RAB11B	99	96.471	ENSLACG00000012184	RAB11A	79	96.471
ENSLACG00000016974	RAB11B	98	32.941	ENSLACG00000017138	RRAS	97	32.941
ENSLACG00000016974	RAB11B	91	36.943	ENSLACG00000005168	RAB6A	75	36.943
ENSLACG00000016974	RAB11B	88	38.961	ENSLACG00000011557	zgc:101559	67	38.961
ENSLACG00000016974	RAB11B	99	78.363	ENSLACG00000011157	RAB25	80	78.363
ENSLACG00000016974	RAB11B	96	53.939	ENSLACG00000011181	RAB14	77	53.939
ENSLACG00000016974	RAB11B	94	39.877	ENSLACG00000012674	si:dkey-34d22.5	78	39.877
ENSLACG00000016974	RAB11B	91	30.189	ENSLACG00000001282	-	76	30.189
ENSLACG00000016974	RAB11B	91	43.312	ENSLACG00000007092	RAB22A	81	43.312
ENSLACG00000016974	RAB11B	91	32.704	ENSLACG00000003581	rasd3	76	32.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016974	RAB11B	99	99.415	ENSG00000185236	RAB11B	100	100.000	Homo_sapiens
ENSLACG00000016974	RAB11B	99	97.688	ENSAMEG00000004955	RAB11B	78	97.688	Ailuropoda_melanoleuca
ENSLACG00000016974	RAB11B	100	97.093	ENSACIG00000024374	rab11ba	71	97.093	Amphilophus_citrinellus
ENSLACG00000016974	RAB11B	99	98.235	ENSAOCG00000018050	rab11ba	78	98.235	Amphiprion_ocellaris
ENSLACG00000016974	RAB11B	100	97.093	ENSAPEG00000009177	rab11ba	78	97.647	Amphiprion_percula
ENSLACG00000016974	RAB11B	99	99.412	ENSATEG00000023730	rab11ba	78	99.412	Anabas_testudineus
ENSLACG00000016974	RAB11B	99	99.415	ENSANAG00000037616	RAB11B	96	99.415	Aotus_nancymaae
ENSLACG00000016974	RAB11B	99	90.000	ENSACLG00000018852	-	77	90.000	Astatotilapia_calliptera
ENSLACG00000016974	RAB11B	99	97.059	ENSACLG00000005420	rab11ba	78	97.059	Astatotilapia_calliptera
ENSLACG00000016974	RAB11B	99	92.353	WBGene00004274	rab-11.1	81	92.353	Caenorhabditis_elegans
ENSLACG00000016974	RAB11B	99	99.415	ENSCJAG00000010778	RAB11B	96	99.415	Callithrix_jacchus
ENSLACG00000016974	RAB11B	99	99.412	ENSCAFG00000032060	RAB11B	78	99.412	Canis_familiaris
ENSLACG00000016974	RAB11B	99	99.412	ENSCAFG00020022184	RAB11B	78	99.412	Canis_lupus_dingo
ENSLACG00000016974	RAB11B	99	99.412	ENSTSYG00000014758	RAB11B	78	99.412	Carlito_syrichta
ENSLACG00000016974	RAB11B	99	99.412	ENSCPOG00000030154	RAB11B	78	99.412	Cavia_porcellus
ENSLACG00000016974	RAB11B	99	99.415	ENSCCAG00000031042	RAB11B	95	99.415	Cebus_capucinus
ENSLACG00000016974	RAB11B	99	99.412	ENSCLAG00000003207	RAB11B	78	99.412	Chinchilla_lanigera
ENSLACG00000016974	RAB11B	99	99.412	ENSCSAG00000008024	RAB11B	78	99.412	Chlorocebus_sabaeus
ENSLACG00000016974	RAB11B	99	81.176	ENSCHOG00000013525	RAB11B	77	81.176	Choloepus_hoffmanni
ENSLACG00000016974	RAB11B	99	95.882	ENSCING00000009526	-	78	95.882	Ciona_intestinalis
ENSLACG00000016974	RAB11B	99	99.412	ENSCANG00000040517	RAB11B	78	99.412	Colobus_angolensis_palliatus
ENSLACG00000016974	RAB11B	99	99.412	ENSCGRG00001013827	Rab11b	78	99.412	Cricetulus_griseus_chok1gshd
ENSLACG00000016974	RAB11B	99	99.412	ENSCGRG00000010967	Rab11b	78	99.412	Cricetulus_griseus_crigri
ENSLACG00000016974	RAB11B	99	98.824	ENSCSEG00000007121	rab11ba	66	98.824	Cynoglossus_semilaevis
ENSLACG00000016974	RAB11B	99	100.000	ENSDARG00000041878	rab11ba	78	100.000	Danio_rerio
ENSLACG00000016974	RAB11B	99	97.059	ENSDNOG00000004134	-	78	97.059	Dasypus_novemcinctus
ENSLACG00000016974	RAB11B	99	99.412	ENSDNOG00000014618	RAB11B	76	99.412	Dasypus_novemcinctus
ENSLACG00000016974	RAB11B	99	99.412	ENSDORG00000006304	Rab11b	78	99.412	Dipodomys_ordii
ENSLACG00000016974	RAB11B	99	88.824	ENSEBUG00000015447	-	78	88.824	Eptatretus_burgeri
ENSLACG00000016974	RAB11B	98	97.041	ENSEBUG00000011775	rab11ba	76	97.041	Eptatretus_burgeri
ENSLACG00000016974	RAB11B	83	99.301	ENSEEUG00000009165	-	100	99.301	Erinaceus_europaeus
ENSLACG00000016974	RAB11B	99	95.882	ENSELUG00000019240	-	87	95.882	Esox_lucius
ENSLACG00000016974	RAB11B	99	99.412	ENSFCAG00000015216	RAB11B	78	99.412	Felis_catus
ENSLACG00000016974	RAB11B	99	99.412	ENSFDAG00000019872	RAB11B	78	99.412	Fukomys_damarensis
ENSLACG00000016974	RAB11B	99	98.824	ENSFHEG00000022642	rab11ba	78	98.824	Fundulus_heteroclitus
ENSLACG00000016974	RAB11B	99	96.471	ENSGMOG00000007390	rab11ba	78	96.471	Gadus_morhua
ENSLACG00000016974	RAB11B	99	98.824	ENSGAFG00000005679	rab11ba	78	98.824	Gambusia_affinis
ENSLACG00000016974	RAB11B	99	100.000	ENSGAGG00000012557	-	78	100.000	Gopherus_agassizii
ENSLACG00000016974	RAB11B	99	99.412	ENSHGLG00000014984	RAB11B	78	99.412	Heterocephalus_glaber_female
ENSLACG00000016974	RAB11B	99	99.412	ENSHGLG00100003638	RAB11B	78	99.412	Heterocephalus_glaber_male
ENSLACG00000016974	RAB11B	99	99.412	ENSSTOG00000031571	RAB11B	78	99.412	Ictidomys_tridecemlineatus
ENSLACG00000016974	RAB11B	99	99.412	ENSJJAG00000018891	Rab11b	78	99.412	Jaculus_jaculus
ENSLACG00000016974	RAB11B	99	99.412	ENSKMAG00000006082	-	78	99.412	Kryptolebias_marmoratus
ENSLACG00000016974	RAB11B	99	98.824	ENSLBEG00000006087	rab11ba	78	98.824	Labrus_bergylta
ENSLACG00000016974	RAB11B	99	99.412	ENSLAFG00000013598	RAB11B	78	99.412	Loxodonta_africana
ENSLACG00000016974	RAB11B	99	99.412	ENSMNEG00000039759	-	78	99.412	Macaca_nemestrina
ENSLACG00000016974	RAB11B	99	98.235	ENSMAMG00000018556	rab11ba	78	98.235	Mastacembelus_armatus
ENSLACG00000016974	RAB11B	99	90.000	ENSMZEG00005019251	-	77	90.000	Maylandia_zebra
ENSLACG00000016974	RAB11B	99	97.059	ENSMZEG00005010947	rab11ba	78	97.059	Maylandia_zebra
ENSLACG00000016974	RAB11B	99	99.412	ENSMAUG00000021579	Rab11b	78	99.412	Mesocricetus_auratus
ENSLACG00000016974	RAB11B	99	99.412	ENSMOCG00000012667	Rab11b	78	99.412	Microtus_ochrogaster
ENSLACG00000016974	RAB11B	99	95.882	ENSMALG00000021949	rab11ba	78	95.882	Monopterus_albus
ENSLACG00000016974	RAB11B	99	99.412	MGP_CAROLIEiJ_G0021415	Rab11b	97	98.621	Mus_caroli
ENSLACG00000016974	RAB11B	99	99.412	ENSMUSG00000077450	Rab11b	97	98.621	Mus_musculus
ENSLACG00000016974	RAB11B	99	99.412	MGP_PahariEiJ_G0020420	Rab11b	78	99.412	Mus_pahari
ENSLACG00000016974	RAB11B	99	99.412	MGP_SPRETEiJ_G0022327	Rab11b	97	98.621	Mus_spretus
ENSLACG00000016974	RAB11B	99	99.412	ENSMPUG00000007263	RAB11B	78	99.412	Mustela_putorius_furo
ENSLACG00000016974	RAB11B	99	94.220	ENSMLUG00000002308	-	78	94.220	Myotis_lucifugus
ENSLACG00000016974	RAB11B	99	99.412	ENSNGAG00000015757	Rab11b	78	99.412	Nannospalax_galili
ENSLACG00000016974	RAB11B	99	97.647	ENSNBRG00000023898	rab11ba	65	97.647	Neolamprologus_brichardi
ENSLACG00000016974	RAB11B	99	99.412	ENSNLEG00000001733	RAB11B	78	99.412	Nomascus_leucogenys
ENSLACG00000016974	RAB11B	99	99.412	ENSODEG00000011371	RAB11B	78	99.412	Octodon_degus
ENSLACG00000016974	RAB11B	99	98.235	ENSONIG00000002535	rab11ba	78	98.235	Oreochromis_niloticus
ENSLACG00000016974	RAB11B	92	99.367	ENSOCUG00000028208	RAB11B	63	99.367	Oryctolagus_cuniculus
ENSLACG00000016974	RAB11B	99	98.824	ENSORLG00000015307	rab11ba	78	98.824	Oryzias_latipes
ENSLACG00000016974	RAB11B	99	98.824	ENSORLG00020020816	rab11ba	78	98.824	Oryzias_latipes_hni
ENSLACG00000016974	RAB11B	99	98.824	ENSORLG00015016946	rab11ba	64	98.824	Oryzias_latipes_hsok
ENSLACG00000016974	RAB11B	99	98.824	ENSOMEG00000002581	rab11ba	78	98.824	Oryzias_melastigma
ENSLACG00000016974	RAB11B	99	99.412	ENSOGAG00000003227	RAB11B	77	99.412	Otolemur_garnettii
ENSLACG00000016974	RAB11B	99	99.412	ENSOARG00000003801	RAB11B	76	99.412	Ovis_aries
ENSLACG00000016974	RAB11B	99	99.415	ENSPPRG00000010160	RAB11B	84	99.415	Panthera_pardus
ENSLACG00000016974	RAB11B	99	99.412	ENSPEMG00000014536	Rab11b	78	99.412	Peromyscus_maniculatus_bairdii
ENSLACG00000016974	RAB11B	91	93.631	ENSPMAG00000009335	-	76	93.631	Petromyzon_marinus
ENSLACG00000016974	RAB11B	99	99.412	ENSPFOG00000006159	rab11ba	78	99.412	Poecilia_formosa
ENSLACG00000016974	RAB11B	99	99.412	ENSPLAG00000014243	rab11ba	78	99.412	Poecilia_latipinna
ENSLACG00000016974	RAB11B	99	99.415	ENSPMEG00000007917	rab11ba	59	99.412	Poecilia_mexicana
ENSLACG00000016974	RAB11B	99	99.412	ENSPREG00000006357	rab11ba	61	99.412	Poecilia_reticulata
ENSLACG00000016974	RAB11B	99	99.412	ENSPPYG00000009504	RAB11B	78	99.412	Pongo_abelii
ENSLACG00000016974	RAB11B	99	88.235	ENSPCAG00000016118	RAB11B	78	88.235	Procavia_capensis
ENSLACG00000016974	RAB11B	85	97.260	ENSPCOG00000008655	-	100	97.260	Propithecus_coquereli
ENSLACG00000016974	RAB11B	99	99.415	ENSPCOG00000028053	RAB11B	93	99.415	Propithecus_coquereli
ENSLACG00000016974	RAB11B	99	99.412	ENSPVAG00000009645	RAB11B	78	99.412	Pteropus_vampyrus
ENSLACG00000016974	RAB11B	99	78.488	ENSPNYG00000023810	-	74	78.488	Pundamilia_nyererei
ENSLACG00000016974	RAB11B	99	97.059	ENSPNYG00000019644	rab11ba	78	97.059	Pundamilia_nyererei
ENSLACG00000016974	RAB11B	99	100.000	ENSPNAG00000020475	rab11ba	78	100.000	Pygocentrus_nattereri
ENSLACG00000016974	RAB11B	99	98.824	ENSPNAG00000006431	-	78	98.824	Pygocentrus_nattereri
ENSLACG00000016974	RAB11B	99	99.412	ENSRNOG00000007648	Rab11b	78	99.412	Rattus_norvegicus
ENSLACG00000016974	RAB11B	99	99.415	ENSSBOG00000035094	RAB11B	96	99.415	Saimiri_boliviensis_boliviensis
ENSLACG00000016974	RAB11B	99	99.412	ENSSDUG00000002965	rab11ba	78	99.412	Seriola_dumerili
ENSLACG00000016974	RAB11B	99	99.412	ENSSLDG00000005221	rab11ba	78	99.412	Seriola_lalandi_dorsalis
ENSLACG00000016974	RAB11B	99	98.235	ENSSPAG00000017313	rab11ba	78	98.235	Stegastes_partitus
ENSLACG00000016974	RAB11B	99	99.412	ENSSSCG00000013600	RAB11B	78	99.412	Sus_scrofa
ENSLACG00000016974	RAB11B	75	99.225	ENSTBEG00000014750	-	100	99.225	Tupaia_belangeri
ENSLACG00000016974	RAB11B	99	99.412	ENSTTRG00000009758	RAB11B	78	99.412	Tursiops_truncatus
ENSLACG00000016974	RAB11B	76	99.231	ENSUMAG00000014594	RAB11B	64	99.231	Ursus_maritimus
ENSLACG00000016974	RAB11B	99	99.412	ENSVVUG00000025210	RAB11B	78	99.412	Vulpes_vulpes
ENSLACG00000016974	RAB11B	99	99.412	ENSXETG00000021890	rab11b.2	77	99.412	Xenopus_tropicalis
ENSLACG00000016974	RAB11B	77	98.496	ENSXCOG00000009194	-	98	98.496	Xiphophorus_couchianus
ENSLACG00000016974	RAB11B	99	98.830	ENSXMAG00000013416	rab11ba	78	98.824	Xiphophorus_maculatus