EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000016977 (Gene tree)
Gene ID: 102358300
Gene Symbol: DDX23
Alias: PRPF28|SNRNP100|U5-100K|prp28
Full Name: DEAD-box helicase 23
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 22942 bases
Position: chrJH126659.1:1839451-1862392
Accession: 102358300
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000019302	DEAD	PF00270.29	5e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000019436	DDX23-201	4293	XM_005991422	ENSLACP00000019302	751 (aa)	XP_014341286	H3BBN1

Gene Model

Click here to download ENSLACG00000016977's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016977's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000016977	DDX23	54	30.657	ENSLACG00000003242	eif4a1a	92	30.657
ENSLACG00000016977	DDX23	51	30.105	ENSLACG00000000108	EIF4A3	85	30.105
ENSLACG00000016977	DDX23	54	30.073	ENSLACG00000004638	-	90	30.073
ENSLACG00000016977	DDX23	60	39.780	ENSLACG00000012899	DDX41	68	39.780
ENSLACG00000016977	DDX23	51	39.691	ENSLACG00000015051	DDX5	70	39.691
ENSLACG00000016977	DDX23	55	31.643	ENSLACG00000015214	ddx61	77	31.643
ENSLACG00000016977	DDX23	58	35.973	ENSLACG00000010101	DDX59	65	35.973
ENSLACG00000016977	DDX23	50	31.877	ENSLACG00000008244	DDX49	74	31.714
ENSLACG00000016977	DDX23	52	36.066	ENSLACG00000010529	DDX1	57	36.066
ENSLACG00000016977	DDX23	57	31.818	ENSLACG00000012514	DDX52	66	31.818
ENSLACG00000016977	DDX23	52	36.735	ENSLACG00000013814	DDX47	79	36.735
ENSLACG00000016977	DDX23	55	31.429	ENSLACG00000015063	DDX39A	90	31.429
ENSLACG00000016977	DDX23	54	30.170	ENSLACG00000017818	eif4a2	91	30.170
ENSLACG00000016977	DDX23	51	30.769	ENSLACG00000015308	DDX18	61	30.769
ENSLACG00000016977	DDX23	55	39.904	ENSLACG00000006598	-	57	39.904
ENSLACG00000016977	DDX23	54	31.773	ENSLACG00000017153	DDX6	75	32.266
ENSLACG00000016977	DDX23	57	38.051	ENSLACG00000000741	ddx43	82	38.051
ENSLACG00000016977	DDX23	52	33.172	ENSLACG00000017050	DDX55	64	33.172
ENSLACG00000016977	DDX23	55	39.019	ENSLACG00000007753	ddx3xa	65	38.377

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016977	DDX23	99	92.848	ENSG00000174243	DDX23	92	92.543	Homo_sapiens
ENSLACG00000016977	DDX23	96	89.931	ENSAPOG00000003760	ddx23	94	89.125	Acanthochromis_polyacanthus
ENSLACG00000016977	DDX23	99	92.543	ENSAMEG00000007123	DDX23	92	92.543	Ailuropoda_melanoleuca
ENSLACG00000016977	DDX23	88	91.970	ENSACIG00000000022	ddx23	93	83.910	Amphilophus_citrinellus
ENSLACG00000016977	DDX23	96	89.931	ENSAOCG00000017348	ddx23	94	89.125	Amphiprion_ocellaris
ENSLACG00000016977	DDX23	99	88.800	ENSAPEG00000016857	ddx23	94	89.067	Amphiprion_percula
ENSLACG00000016977	DDX23	96	90.483	ENSATEG00000016800	ddx23	94	89.523	Anabas_testudineus
ENSLACG00000016977	DDX23	97	83.627	ENSAPLG00000002868	DDX23	90	84.303	Anas_platyrhynchos
ENSLACG00000016977	DDX23	99	91.611	ENSACAG00000025589	DDX23	88	91.755	Anolis_carolinensis
ENSLACG00000016977	DDX23	99	92.982	ENSANAG00000018663	DDX23	92	92.676	Aotus_nancymaae
ENSLACG00000016977	DDX23	99	87.798	ENSAMXG00000017597	ddx23	93	88.594	Astyanax_mexicanus
ENSLACG00000016977	DDX23	99	92.533	ENSBTAG00000021810	DDX23	92	92.543	Bos_taurus
ENSLACG00000016977	DDX23	99	92.982	ENSCJAG00000020775	DDX23	92	92.440	Callithrix_jacchus
ENSLACG00000016977	DDX23	99	92.578	ENSCAFG00000025422	DDX23	92	92.277	Canis_familiaris
ENSLACG00000016977	DDX23	99	92.578	ENSCAFG00020013383	DDX23	92	92.277	Canis_lupus_dingo
ENSLACG00000016977	DDX23	99	92.400	ENSCHIG00000018783	DDX23	92	92.410	Capra_hircus
ENSLACG00000016977	DDX23	99	92.578	ENSTSYG00000005429	DDX23	92	92.277	Carlito_syrichta
ENSLACG00000016977	DDX23	99	92.973	ENSCPOG00000003278	DDX23	92	92.667	Cavia_porcellus
ENSLACG00000016977	DDX23	87	95.000	ENSCCAG00000029177	DDX23	90	95.000	Cebus_capucinus
ENSLACG00000016977	DDX23	99	78.523	ENSCATG00000032335	-	92	78.523	Cercocebus_atys
ENSLACG00000016977	DDX23	99	92.848	ENSCATG00000039797	DDX23	92	92.543	Cercocebus_atys
ENSLACG00000016977	DDX23	99	92.838	ENSCLAG00000002986	DDX23	92	92.533	Chinchilla_lanigera
ENSLACG00000016977	DDX23	99	92.848	ENSCSAG00000006240	DDX23	92	92.543	Chlorocebus_sabaeus
ENSLACG00000016977	DDX23	80	92.562	ENSCHOG00000009027	DDX23	90	91.599	Choloepus_hoffmanni
ENSLACG00000016977	DDX23	98	92.537	ENSCPBG00000019988	DDX23	92	91.877	Chrysemys_picta_bellii
ENSLACG00000016977	DDX23	99	69.118	ENSCING00000001913	-	98	70.238	Ciona_intestinalis
ENSLACG00000016977	DDX23	91	67.936	ENSCSAVG00000004158	-	100	67.350	Ciona_savignyi
ENSLACG00000016977	DDX23	95	93.961	ENSCANG00000040182	DDX23	99	93.961	Colobus_angolensis_palliatus
ENSLACG00000016977	DDX23	98	76.892	ENSCANG00000042510	-	93	76.408	Colobus_angolensis_palliatus
ENSLACG00000016977	DDX23	99	92.713	ENSCGRG00001015090	Ddx23	92	92.410	Cricetulus_griseus_chok1gshd
ENSLACG00000016977	DDX23	99	92.713	ENSCGRG00000016314	Ddx23	92	92.410	Cricetulus_griseus_crigri
ENSLACG00000016977	DDX23	91	90.909	ENSCSEG00000020970	ddx23	94	86.579	Cynoglossus_semilaevis
ENSLACG00000016977	DDX23	99	88.048	ENSCVAG00000015745	ddx23	94	88.579	Cyprinodon_variegatus
ENSLACG00000016977	DDX23	91	91.777	ENSDARG00000021945	ddx23	93	88.933	Danio_rerio
ENSLACG00000016977	DDX23	98	93.351	ENSDNOG00000043176	DDX23	92	92.543	Dasypus_novemcinctus
ENSLACG00000016977	DDX23	99	92.676	ENSDORG00000012659	Ddx23	92	92.676	Dipodomys_ordii
ENSLACG00000016977	DDX23	92	71.127	FBgn0032690	CG10333	86	71.268	Drosophila_melanogaster
ENSLACG00000016977	DDX23	99	90.148	ENSETEG00000015816	DDX23	92	89.481	Echinops_telfairi
ENSLACG00000016977	DDX23	93	78.205	ENSEBUG00000003319	ddx23	93	82.273	Eptatretus_burgeri
ENSLACG00000016977	DDX23	99	92.676	ENSEASG00005000455	DDX23	92	92.676	Equus_asinus_asinus
ENSLACG00000016977	DDX23	99	92.676	ENSECAG00000016681	DDX23	92	92.676	Equus_caballus
ENSLACG00000016977	DDX23	99	84.554	ENSEEUG00000009658	DDX23	91	84.554	Erinaceus_europaeus
ENSLACG00000016977	DDX23	99	85.847	ENSELUG00000015358	ddx23	98	85.469	Esox_lucius
ENSLACG00000016977	DDX23	99	92.578	ENSFCAG00000000082	DDX23	92	92.277	Felis_catus
ENSLACG00000016977	DDX23	99	89.081	ENSFALG00000000133	DDX23	92	89.348	Ficedula_albicollis
ENSLACG00000016977	DDX23	99	92.838	ENSFDAG00000017059	DDX23	92	92.533	Fukomys_damarensis
ENSLACG00000016977	DDX23	97	87.945	ENSFHEG00000017499	ddx23	94	87.135	Fundulus_heteroclitus
ENSLACG00000016977	DDX23	99	86.152	ENSGMOG00000009592	ddx23	95	86.152	Gadus_morhua
ENSLACG00000016977	DDX23	99	92.256	ENSGALG00000032307	DDX23	92	91.899	Gallus_gallus
ENSLACG00000016977	DDX23	96	88.966	ENSGAFG00000012366	ddx23	94	87.931	Gambusia_affinis
ENSLACG00000016977	DDX23	99	85.733	ENSGACG00000003024	ddx23	99	91.611	Gasterosteus_aculeatus
ENSLACG00000016977	DDX23	98	92.402	ENSGAGG00000007790	DDX23	92	91.744	Gopherus_agassizii
ENSLACG00000016977	DDX23	99	92.848	ENSGGOG00000015252	DDX23	100	96.382	Gorilla_gorilla
ENSLACG00000016977	DDX23	94	90.510	ENSHBUG00000011876	ddx23	94	88.727	Haplochromis_burtoni
ENSLACG00000016977	DDX23	99	92.838	ENSHGLG00000004292	DDX23	92	92.533	Heterocephalus_glaber_female
ENSLACG00000016977	DDX23	99	92.838	ENSHGLG00100017585	DDX23	92	92.533	Heterocephalus_glaber_male
ENSLACG00000016977	DDX23	94	90.793	ENSHCOG00000019338	ddx23	94	88.212	Hippocampus_comes
ENSLACG00000016977	DDX23	99	88.133	ENSIPUG00000005247	DDX23	93	88.267	Ictalurus_punctatus
ENSLACG00000016977	DDX23	99	92.848	ENSSTOG00000004219	DDX23	92	92.410	Ictidomys_tridecemlineatus
ENSLACG00000016977	DDX23	98	93.216	ENSJJAG00000018994	Ddx23	92	92.410	Jaculus_jaculus
ENSLACG00000016977	DDX23	97	89.026	ENSKMAG00000012060	ddx23	90	91.515	Kryptolebias_marmoratus
ENSLACG00000016977	DDX23	99	86.605	ENSLBEG00000019475	ddx23	94	87.135	Labrus_bergylta
ENSLACG00000016977	DDX23	96	89.959	ENSLOCG00000007385	ddx23	92	88.904	Lepisosteus_oculatus
ENSLACG00000016977	DDX23	99	92.578	ENSLAFG00000014227	DDX23	92	92.277	Loxodonta_africana
ENSLACG00000016977	DDX23	99	92.848	ENSMFAG00000038666	DDX23	92	92.543	Macaca_fascicularis
ENSLACG00000016977	DDX23	99	92.848	ENSMMUG00000008432	DDX23	100	96.382	Macaca_mulatta
ENSLACG00000016977	DDX23	99	92.578	ENSMNEG00000040016	DDX23	92	92.277	Macaca_nemestrina
ENSLACG00000016977	DDX23	99	77.823	ENSMNEG00000045260	-	91	77.823	Macaca_nemestrina
ENSLACG00000016977	DDX23	98	77.267	ENSMLEG00000035096	-	92	76.779	Mandrillus_leucophaeus
ENSLACG00000016977	DDX23	99	92.848	ENSMLEG00000042846	DDX23	92	92.543	Mandrillus_leucophaeus
ENSLACG00000016977	DDX23	99	86.922	ENSMAMG00000024144	ddx23	94	88.329	Mastacembelus_armatus
ENSLACG00000016977	DDX23	94	90.510	ENSMZEG00005026086	ddx23	94	88.594	Maylandia_zebra
ENSLACG00000016977	DDX23	99	92.432	ENSMAUG00000012336	Ddx23	92	92.133	Mesocricetus_auratus
ENSLACG00000016977	DDX23	98	93.216	ENSMICG00000017541	DDX23	92	92.390	Microcebus_murinus
ENSLACG00000016977	DDX23	99	92.982	ENSMOCG00000018987	Ddx23	92	92.543	Microtus_ochrogaster
ENSLACG00000016977	DDX23	99	81.952	ENSMMOG00000012406	ddx23	93	81.684	Mola_mola
ENSLACG00000016977	DDX23	96	93.103	ENSMODG00000009975	DDX23	92	92.123	Monodelphis_domestica
ENSLACG00000016977	DDX23	99	88.446	ENSMALG00000022366	ddx23	94	88.579	Monopterus_albus
ENSLACG00000016977	DDX23	99	92.578	MGP_CAROLIEiJ_G0020240	Ddx23	92	91.910	Mus_caroli
ENSLACG00000016977	DDX23	99	92.578	ENSMUSG00000003360	Ddx23	92	91.910	Mus_musculus
ENSLACG00000016977	DDX23	98	92.944	MGP_PahariEiJ_G0020243	Ddx23	92	91.777	Mus_pahari
ENSLACG00000016977	DDX23	99	92.578	MGP_SPRETEiJ_G0021137	Ddx23	92	91.910	Mus_spretus
ENSLACG00000016977	DDX23	99	92.848	ENSMPUG00000014739	DDX23	92	92.543	Mustela_putorius_furo
ENSLACG00000016977	DDX23	98	93.108	ENSMLUG00000011033	-	92	92.657	Myotis_lucifugus
ENSLACG00000016977	DDX23	99	89.339	ENSMLUG00000003683	-	92	88.594	Myotis_lucifugus
ENSLACG00000016977	DDX23	99	92.277	ENSNGAG00000019018	Ddx23	92	92.277	Nannospalax_galili
ENSLACG00000016977	DDX23	91	91.813	ENSNBRG00000022928	ddx23	94	85.294	Neolamprologus_brichardi
ENSLACG00000016977	DDX23	99	85.155	ENSNLEG00000017864	DDX23	91	84.953	Nomascus_leucogenys
ENSLACG00000016977	DDX23	96	93.103	ENSMEUG00000009477	DDX23	92	92.123	Notamacropus_eugenii
ENSLACG00000016977	DDX23	98	93.351	ENSOPRG00000007170	-	92	92.523	Ochotona_princeps
ENSLACG00000016977	DDX23	99	92.838	ENSODEG00000003592	DDX23	92	92.165	Octodon_degus
ENSLACG00000016977	DDX23	94	90.652	ENSONIG00000017048	ddx23	94	88.727	Oreochromis_niloticus
ENSLACG00000016977	DDX23	99	92.713	ENSOCUG00000001414	DDX23	92	92.410	Oryctolagus_cuniculus
ENSLACG00000016977	DDX23	96	88.674	ENSORLG00000012330	ddx23	94	87.384	Oryzias_latipes
ENSLACG00000016977	DDX23	96	88.812	ENSORLG00020017586	ddx23	94	87.517	Oryzias_latipes_hni
ENSLACG00000016977	DDX23	88	90.923	ENSORLG00015012361	ddx23	88	90.923	Oryzias_latipes_hsok
ENSLACG00000016977	DDX23	96	89.227	ENSOMEG00000006453	ddx23	94	87.682	Oryzias_melastigma
ENSLACG00000016977	DDX23	99	92.982	ENSOGAG00000016813	DDX23	92	92.676	Otolemur_garnettii
ENSLACG00000016977	DDX23	99	92.400	ENSOARG00000019105	DDX23	83	92.410	Ovis_aries
ENSLACG00000016977	DDX23	100	66.887	ENSPPAG00000038775	-	92	67.154	Pan_paniscus
ENSLACG00000016977	DDX23	99	92.848	ENSPPAG00000037807	DDX23	100	96.382	Pan_paniscus
ENSLACG00000016977	DDX23	99	92.578	ENSPPRG00000015345	DDX23	92	92.277	Panthera_pardus
ENSLACG00000016977	DDX23	99	92.578	ENSPTIG00000018873	DDX23	92	92.277	Panthera_tigris_altaica
ENSLACG00000016977	DDX23	100	70.479	ENSPTRG00000051972	-	92	70.346	Pan_troglodytes
ENSLACG00000016977	DDX23	99	92.713	ENSPTRG00000004887	DDX23	100	96.382	Pan_troglodytes
ENSLACG00000016977	DDX23	99	92.848	ENSPANG00000019459	DDX23	84	92.543	Papio_anubis
ENSLACG00000016977	DDX23	92	83.774	ENSPANG00000035074	-	97	83.774	Papio_anubis
ENSLACG00000016977	DDX23	99	86.675	ENSPKIG00000024110	ddx23	93	87.467	Paramormyrops_kingsleyae
ENSLACG00000016977	DDX23	98	82.904	ENSPSIG00000002834	DDX23	94	82.290	Pelodiscus_sinensis
ENSLACG00000016977	DDX23	88	91.212	ENSPMGG00000010243	ddx23	93	83.644	Periophthalmus_magnuspinnatus
ENSLACG00000016977	DDX23	99	92.713	ENSPEMG00000011305	Ddx23	92	92.410	Peromyscus_maniculatus_bairdii
ENSLACG00000016977	DDX23	91	84.942	ENSPMAG00000008625	ddx23	99	80.876	Petromyzon_marinus
ENSLACG00000016977	DDX23	96	93.103	ENSPCIG00000027691	DDX23	92	92.123	Phascolarctos_cinereus
ENSLACG00000016977	DDX23	94	90.268	ENSPFOG00000012159	ddx23	94	88.079	Poecilia_formosa
ENSLACG00000016977	DDX23	94	90.268	ENSPLAG00000005052	ddx23	94	88.181	Poecilia_latipinna
ENSLACG00000016977	DDX23	94	90.268	ENSPMEG00000015385	ddx23	94	88.181	Poecilia_mexicana
ENSLACG00000016977	DDX23	96	89.655	ENSPREG00000007074	ddx23	94	88.462	Poecilia_reticulata
ENSLACG00000016977	DDX23	99	92.848	ENSPPYG00000004468	DDX23	88	92.543	Pongo_abelii
ENSLACG00000016977	DDX23	95	94.101	ENSPCAG00000002016	DDX23	87	94.101	Procavia_capensis
ENSLACG00000016977	DDX23	99	92.848	ENSPCOG00000025915	DDX23	100	96.382	Propithecus_coquereli
ENSLACG00000016977	DDX23	99	92.848	ENSPVAG00000009818	DDX23	92	92.543	Pteropus_vampyrus
ENSLACG00000016977	DDX23	91	91.667	ENSPNYG00000021038	ddx23	94	85.275	Pundamilia_nyererei
ENSLACG00000016977	DDX23	90	90.370	ENSPNAG00000019203	ddx23	89	91.390	Pygocentrus_nattereri
ENSLACG00000016977	DDX23	99	92.578	ENSRNOG00000060154	Ddx23	92	92.277	Rattus_norvegicus
ENSLACG00000016977	DDX23	93	81.727	ENSRBIG00000036337	-	97	77.689	Rhinopithecus_bieti
ENSLACG00000016977	DDX23	99	78.649	ENSRBIG00000040362	DDX23	91	78.400	Rhinopithecus_bieti
ENSLACG00000016977	DDX23	99	92.848	ENSRROG00000028964	DDX23	92	92.543	Rhinopithecus_roxellana
ENSLACG00000016977	DDX23	99	78.360	ENSRROG00000045747	-	96	78.360	Rhinopithecus_roxellana
ENSLACG00000016977	DDX23	76	36.905	YDR243C	-	81	39.033	Saccharomyces_cerevisiae
ENSLACG00000016977	DDX23	99	92.982	ENSSBOG00000025799	DDX23	92	92.676	Saimiri_boliviensis_boliviensis
ENSLACG00000016977	DDX23	96	93.103	ENSSHAG00000006590	DDX23	92	92.123	Sarcophilus_harrisii
ENSLACG00000016977	DDX23	96	89.793	ENSSFOG00015013273	ddx23	93	88.757	Scleropages_formosus
ENSLACG00000016977	DDX23	99	86.569	ENSSMAG00000000529	ddx23	94	87.101	Scophthalmus_maximus
ENSLACG00000016977	DDX23	96	89.945	ENSSDUG00000022459	ddx23	94	89.390	Seriola_dumerili
ENSLACG00000016977	DDX23	96	89.945	ENSSLDG00000010453	ddx23	94	89.390	Seriola_lalandi_dorsalis
ENSLACG00000016977	DDX23	91	96.936	ENSSARG00000004534	DDX23	84	96.936	Sorex_araneus
ENSLACG00000016977	DDX23	99	91.521	ENSSPUG00000016044	DDX23	92	91.368	Sphenodon_punctatus
ENSLACG00000016977	DDX23	94	90.665	ENSSPAG00000016482	ddx23	94	88.727	Stegastes_partitus
ENSLACG00000016977	DDX23	99	92.543	ENSSSCG00000000176	DDX23	92	92.543	Sus_scrofa
ENSLACG00000016977	DDX23	91	89.751	ENSTRUG00000000455	ddx23	93	86.115	Takifugu_rubripes
ENSLACG00000016977	DDX23	95	93.961	ENSTBEG00000016909	DDX23	87	93.961	Tupaia_belangeri
ENSLACG00000016977	DDX23	99	85.619	ENSTTRG00000004604	DDX23	92	85.619	Tursiops_truncatus
ENSLACG00000016977	DDX23	99	92.676	ENSUAMG00000027082	DDX23	92	92.676	Ursus_americanus
ENSLACG00000016977	DDX23	99	92.676	ENSUMAG00000006538	DDX23	92	92.676	Ursus_maritimus
ENSLACG00000016977	DDX23	99	92.578	ENSVVUG00000019648	DDX23	92	92.277	Vulpes_vulpes
ENSLACG00000016977	DDX23	96	88.105	ENSXETG00000009807	ddx23	88	88.811	Xenopus_tropicalis
ENSLACG00000016977	DDX23	92	90.116	ENSXCOG00000011648	ddx23	93	85.638	Xiphophorus_couchianus
ENSLACG00000016977	DDX23	96	89.517	ENSXMAG00000017387	ddx23	94	88.462	Xiphophorus_maculatus