EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000016980 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 2721 bases
Position: chrJH126797.1:1841644-1844364
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000019305	RNase_H	PF00075.24	3.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000019439	-	2523	-	ENSLACP00000019305	841 (aa)	-	H3BBN4

Gene Model

Click here to download ENSLACG00000016980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000016980's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000016980	-	75	33.957	ENSLACG00000018380	-	99	40.083
ENSLACG00000016980	-	59	52.018	ENSLACG00000009011	-	73	52.018
ENSLACG00000016980	-	75	46.241	ENSLACG00000005007	-	99	46.241
ENSLACG00000016980	-	61	30.233	ENSLACG00000003314	-	52	30.233
ENSLACG00000016980	-	59	41.667	ENSLACG00000002512	-	94	41.250
ENSLACG00000016980	-	54	31.687	ENSLACG00000016441	-	65	31.276
ENSLACG00000016980	-	75	39.035	ENSLACG00000003991	-	76	39.035
ENSLACG00000016980	-	74	41.077	ENSLACG00000011272	-	96	40.741
ENSLACG00000016980	-	61	38.978	ENSLACG00000004343	-	76	38.339
ENSLACG00000016980	-	71	38.989	ENSLACG00000008366	-	96	38.267
ENSLACG00000016980	-	71	34.572	ENSLACG00000015558	-	91	34.572
ENSLACG00000016980	-	54	37.615	ENSLACG00000007830	-	58	37.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000016980	-	68	31.925	ENSATEG00000019692	-	56	31.925	Anabas_testudineus
ENSLACG00000016980	-	53	33.482	ENSATEG00000006997	-	52	33.482	Anabas_testudineus
ENSLACG00000016980	-	68	33.184	ENSATEG00000018698	-	54	33.184	Anabas_testudineus
ENSLACG00000016980	-	57	34.685	ENSACLG00000024556	-	59	34.685	Astatotilapia_calliptera
ENSLACG00000016980	-	69	30.374	ENSACLG00000013947	-	59	30.841	Astatotilapia_calliptera
ENSLACG00000016980	-	74	38.565	ENSACLG00000016581	-	57	38.565	Astatotilapia_calliptera
ENSLACG00000016980	-	62	33.951	ENSAMXG00000039473	-	52	33.951	Astyanax_mexicanus
ENSLACG00000016980	-	60	30.183	ENSAMXG00000035923	-	63	30.612	Astyanax_mexicanus
ENSLACG00000016980	-	57	32.110	ENSAMXG00000038033	-	51	32.110	Astyanax_mexicanus
ENSLACG00000016980	-	68	32.110	ENSAMXG00000032559	-	53	32.110	Astyanax_mexicanus
ENSLACG00000016980	-	68	34.234	ENSAMXG00000039114	-	60	34.234	Astyanax_mexicanus
ENSLACG00000016980	-	71	33.054	ENSAMXG00000033912	-	52	33.054	Astyanax_mexicanus
ENSLACG00000016980	-	58	33.677	ENSAMXG00000041114	-	55	32.646	Astyanax_mexicanus
ENSLACG00000016980	-	61	32.143	ENSAMXG00000036113	-	53	32.143	Astyanax_mexicanus
ENSLACG00000016980	-	56	31.636	ENSAMXG00000041896	-	69	31.273	Astyanax_mexicanus
ENSLACG00000016980	-	66	30.769	ENSAMXG00000041369	-	53	30.769	Astyanax_mexicanus
ENSLACG00000016980	-	56	32.990	ENSAMXG00000033197	-	68	32.302	Astyanax_mexicanus
ENSLACG00000016980	-	55	30.811	ENSAMXG00000043821	-	70	30.811	Astyanax_mexicanus
ENSLACG00000016980	-	63	34.978	ENSCVAG00000020907	-	78	34.978	Cyprinodon_variegatus
ENSLACG00000016980	-	62	31.757	ENSGALG00000044734	-	84	31.757	Gallus_gallus
ENSLACG00000016980	-	63	32.099	ENSGALG00000050520	-	65	32.099	Gallus_gallus
ENSLACG00000016980	-	75	31.481	ENSGALG00000050454	-	76	31.481	Gallus_gallus
ENSLACG00000016980	-	51	41.429	ENSGAGG00000002613	-	62	41.429	Gopherus_agassizii
ENSLACG00000016980	-	66	40.686	ENSLOCG00000009957	-	65	42.135	Lepisosteus_oculatus
ENSLACG00000016980	-	58	34.529	ENSMAMG00000021634	-	73	34.529	Mastacembelus_armatus
ENSLACG00000016980	-	69	37.019	ENSMZEG00005024252	-	72	37.019	Maylandia_zebra
ENSLACG00000016980	-	69	35.211	ENSORLG00000025397	-	62	35.211	Oryzias_latipes
ENSLACG00000016980	-	56	30.622	ENSORLG00000029184	-	63	30.622	Oryzias_latipes
ENSLACG00000016980	-	65	32.143	ENSORLG00000027307	-	50	32.143	Oryzias_latipes
ENSLACG00000016980	-	56	30.317	ENSORLG00000025268	-	62	30.317	Oryzias_latipes
ENSLACG00000016980	-	65	32.961	ENSORLG00000024878	-	62	32.961	Oryzias_latipes
ENSLACG00000016980	-	70	33.036	ENSORLG00000028879	-	66	33.036	Oryzias_latipes
ENSLACG00000016980	-	65	31.982	ENSORLG00020016695	-	78	31.982	Oryzias_latipes_hni
ENSLACG00000016980	-	68	30.734	ENSORLG00020017608	-	58	30.734	Oryzias_latipes_hni
ENSLACG00000016980	-	54	30.952	ENSORLG00020018561	-	50	30.952	Oryzias_latipes_hni
ENSLACG00000016980	-	53	30.894	ENSORLG00020009084	-	62	30.189	Oryzias_latipes_hni
ENSLACG00000016980	-	60	32.589	ENSORLG00020000592	-	64	32.589	Oryzias_latipes_hni
ENSLACG00000016980	-	65	31.982	ENSORLG00015000130	-	51	31.982	Oryzias_latipes_hsok
ENSLACG00000016980	-	69	30.806	ENSORLG00015003846	-	64	30.806	Oryzias_latipes_hsok
ENSLACG00000016980	-	65	31.140	ENSORLG00015018293	-	50	31.140	Oryzias_latipes_hsok
ENSLACG00000016980	-	66	33.784	ENSORLG00015008388	-	62	33.784	Oryzias_latipes_hsok
ENSLACG00000016980	-	59	30.180	ENSORLG00015000379	-	66	30.180	Oryzias_latipes_hsok
ENSLACG00000016980	-	50	33.790	ENSORLG00015010510	-	67	32.877	Oryzias_latipes_hsok
ENSLACG00000016980	-	58	36.486	ENSORLG00015022127	-	64	36.486	Oryzias_latipes_hsok
ENSLACG00000016980	-	75	30.337	ENSORLG00015001207	-	55	30.337	Oryzias_latipes_hsok
ENSLACG00000016980	-	68	33.810	ENSOMEG00000001995	-	53	33.810	Oryzias_melastigma
ENSLACG00000016980	-	60	32.036	ENSOMEG00000012600	-	64	32.036	Oryzias_melastigma
ENSLACG00000016980	-	50	31.868	ENSOMEG00000013479	-	75	31.868	Oryzias_melastigma
ENSLACG00000016980	-	66	30.493	ENSPKIG00000006845	-	60	30.493	Paramormyrops_kingsleyae
ENSLACG00000016980	-	56	38.288	ENSPKIG00000021090	-	54	38.288	Paramormyrops_kingsleyae
ENSLACG00000016980	-	58	32.411	ENSPKIG00000006120	-	54	32.411	Paramormyrops_kingsleyae
ENSLACG00000016980	-	54	42.105	ENSPSIG00000001614	-	68	42.105	Pelodiscus_sinensis
ENSLACG00000016980	-	54	34.898	ENSPSIG00000001136	-	99	34.490	Pelodiscus_sinensis
ENSLACG00000016980	-	69	33.023	ENSPMEG00000023031	-	57	33.023	Poecilia_mexicana
ENSLACG00000016980	-	70	31.081	ENSPREG00000005134	-	50	31.081	Poecilia_reticulata
ENSLACG00000016980	-	68	33.913	ENSPREG00000006122	-	80	33.913	Poecilia_reticulata
ENSLACG00000016980	-	70	30.317	ENSPREG00000006052	-	57	30.317	Poecilia_reticulata
ENSLACG00000016980	-	72	30.282	ENSPNAG00000017165	-	51	30.282	Pygocentrus_nattereri
ENSLACG00000016980	-	69	34.529	ENSSDUG00000010009	-	61	34.529	Seriola_dumerili
ENSLACG00000016980	-	69	33.333	ENSSLDG00000003503	-	59	33.333	Seriola_lalandi_dorsalis
ENSLACG00000016980	-	51	30.222	ENSTRUG00000021236	-	68	30.222	Takifugu_rubripes
ENSLACG00000016980	-	69	33.023	ENSXMAG00000022159	-	51	33.023	Xiphophorus_maculatus
ENSLACG00000016980	-	61	31.073	ENSXMAG00000029360	-	57	31.073	Xiphophorus_maculatus
ENSLACG00000016980	-	60	34.043	ENSXMAG00000024180	-	55	34.043	Xiphophorus_maculatus
ENSLACG00000016980	-	66	30.811	ENSXMAG00000025551	-	54	30.811	Xiphophorus_maculatus