EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000017029 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 18216 bases
Position: chrJH126658.1:1871969-1890184
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000019360	MMR_HSR1	PF01926.23	8.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000019495	-	734	-	ENSLACP00000019360	199 (aa)	-	H3BBT9

Gene Model

Click here to download ENSLACG00000017029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000017029's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000017029	-	100	68.844	ENSLACG00000010795	sar1b	100	68.844
ENSLACG00000017029	-	67	31.159	ENSLACG00000012168	-	83	31.159
ENSLACG00000017029	-	59	31.707	ENSLACG00000003905	ARL4D	61	31.707

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000017029	-	100	67.337	ENSAPOG00000017891	-	100	67.337	Acanthochromis_polyacanthus
ENSLACG00000017029	-	100	73.869	ENSAPOG00000007186	sar1b	100	73.869	Acanthochromis_polyacanthus
ENSLACG00000017029	-	100	74.372	ENSACIG00000013634	sar1b	100	74.372	Amphilophus_citrinellus
ENSLACG00000017029	-	100	67.337	ENSACIG00000024513	-	100	67.337	Amphilophus_citrinellus
ENSLACG00000017029	-	93	77.957	ENSAOCG00000005888	sar1b	93	77.957	Amphiprion_ocellaris
ENSLACG00000017029	-	100	67.337	ENSAOCG00000002627	-	100	67.337	Amphiprion_ocellaris
ENSLACG00000017029	-	100	67.337	ENSAPEG00000019680	-	100	67.337	Amphiprion_percula
ENSLACG00000017029	-	93	77.957	ENSAPEG00000022771	sar1b	93	77.957	Amphiprion_percula
ENSLACG00000017029	-	100	65.829	ENSATEG00000023368	-	100	65.829	Anabas_testudineus
ENSLACG00000017029	-	95	74.603	ENSATEG00000012904	sar1b	95	74.603	Anabas_testudineus
ENSLACG00000017029	-	93	79.032	ENSACAG00000001470	-	93	79.032	Anolis_carolinensis
ENSLACG00000017029	-	100	76.382	ENSACLG00000014649	sar1b	100	76.382	Astatotilapia_calliptera
ENSLACG00000017029	-	100	67.839	ENSACLG00000005011	-	100	67.839	Astatotilapia_calliptera
ENSLACG00000017029	-	100	68.342	ENSAMXG00000034192	-	91	68.342	Astyanax_mexicanus
ENSLACG00000017029	-	59	61.864	ENSAMXG00000018108	sar1b	84	61.864	Astyanax_mexicanus
ENSLACG00000017029	-	98	70.588	ENSCSEG00000015238	sar1b	100	70.588	Cynoglossus_semilaevis
ENSLACG00000017029	-	100	65.829	ENSCSEG00000016976	-	100	65.829	Cynoglossus_semilaevis
ENSLACG00000017029	-	100	75.879	ENSCVAG00000022959	sar1b	100	75.879	Cyprinodon_variegatus
ENSLACG00000017029	-	100	75.377	ENSDARG00000103403	sar1b	100	75.377	Danio_rerio
ENSLACG00000017029	-	93	61.622	FBgn0038947	Sar1	95	61.622	Drosophila_melanogaster
ENSLACG00000017029	-	93	75.269	ENSEBUG00000011723	sar1b	94	75.269	Eptatretus_burgeri
ENSLACG00000017029	-	100	74.372	ENSELUG00000020912	sar1b	100	74.372	Esox_lucius
ENSLACG00000017029	-	100	74.874	ENSFHEG00000019865	sar1b	100	74.874	Fundulus_heteroclitus
ENSLACG00000017029	-	100	74.874	ENSGMOG00000008023	sar1b	100	74.874	Gadus_morhua
ENSLACG00000017029	-	100	74.372	ENSGAFG00000007081	sar1b	100	74.372	Gambusia_affinis
ENSLACG00000017029	-	96	75.521	ENSGACG00000001474	sar1b	96	75.521	Gasterosteus_aculeatus
ENSLACG00000017029	-	100	67.839	ENSHBUG00000018397	-	100	67.839	Haplochromis_burtoni
ENSLACG00000017029	-	100	76.382	ENSHBUG00000000915	sar1b	100	76.382	Haplochromis_burtoni
ENSLACG00000017029	-	100	73.367	ENSHCOG00000010953	sar1b	100	73.367	Hippocampus_comes
ENSLACG00000017029	-	100	74.874	ENSIPUG00000020925	sar1b	100	74.874	Ictalurus_punctatus
ENSLACG00000017029	-	100	68.844	ENSIPUG00000010046	sar1b	100	68.844	Ictalurus_punctatus
ENSLACG00000017029	-	100	66.834	ENSKMAG00000014875	-	100	66.834	Kryptolebias_marmoratus
ENSLACG00000017029	-	100	72.864	ENSKMAG00000019693	sar1b	100	72.864	Kryptolebias_marmoratus
ENSLACG00000017029	-	100	67.839	ENSLBEG00000016945	-	100	67.839	Labrus_bergylta
ENSLACG00000017029	-	100	71.357	ENSLBEG00000027550	sar1b	100	71.357	Labrus_bergylta
ENSLACG00000017029	-	100	73.869	ENSLOCG00000005214	-	100	73.869	Lepisosteus_oculatus
ENSLACG00000017029	-	100	74.874	ENSLOCG00000010197	sar1b	100	74.874	Lepisosteus_oculatus
ENSLACG00000017029	-	100	73.869	ENSMAMG00000021732	sar1b	100	73.869	Mastacembelus_armatus
ENSLACG00000017029	-	100	76.382	ENSMZEG00005008942	sar1b	100	76.382	Maylandia_zebra
ENSLACG00000017029	-	100	67.839	ENSMZEG00005001012	-	100	67.839	Maylandia_zebra
ENSLACG00000017029	-	90	79.444	ENSMGAG00000005387	-	91	79.444	Meleagris_gallopavo
ENSLACG00000017029	-	100	65.829	ENSMMOG00000013803	-	100	65.829	Mola_mola
ENSLACG00000017029	-	100	73.367	ENSMALG00000016635	sar1b	95	78.333	Monopterus_albus
ENSLACG00000017029	-	100	75.879	ENSNBRG00000008013	sar1b	100	75.879	Neolamprologus_brichardi
ENSLACG00000017029	-	100	67.839	ENSNBRG00000014004	-	100	67.839	Neolamprologus_brichardi
ENSLACG00000017029	-	100	74.874	ENSONIG00000017278	sar1b	100	74.874	Oreochromis_niloticus
ENSLACG00000017029	-	100	72.362	ENSORLG00000000932	sar1b	100	72.362	Oryzias_latipes
ENSLACG00000017029	-	100	72.362	ENSORLG00020021985	sar1b	100	72.362	Oryzias_latipes_hni
ENSLACG00000017029	-	100	72.362	ENSORLG00015007044	sar1b	100	72.362	Oryzias_latipes_hsok
ENSLACG00000017029	-	100	72.362	ENSOMEG00000001052	sar1b	100	72.362	Oryzias_melastigma
ENSLACG00000017029	-	100	73.367	ENSPKIG00000017353	-	100	73.367	Paramormyrops_kingsleyae
ENSLACG00000017029	-	100	72.864	ENSPKIG00000010688	sar1b	100	72.864	Paramormyrops_kingsleyae
ENSLACG00000017029	-	59	62.393	ENSPMGG00000001234	sar1b	91	62.393	Periophthalmus_magnuspinnatus
ENSLACG00000017029	-	100	71.144	ENSPMAG00000003593	sar1b	100	71.144	Petromyzon_marinus
ENSLACG00000017029	-	100	74.372	ENSPFOG00000005666	sar1b	100	74.372	Poecilia_formosa
ENSLACG00000017029	-	100	73.869	ENSPLAG00000012223	sar1b	100	73.869	Poecilia_latipinna
ENSLACG00000017029	-	57	63.717	ENSPLAG00000001016	-	69	63.717	Poecilia_latipinna
ENSLACG00000017029	-	100	74.372	ENSPMEG00000016831	sar1b	100	74.372	Poecilia_mexicana
ENSLACG00000017029	-	57	63.717	ENSPREG00000002020	-	79	63.717	Poecilia_reticulata
ENSLACG00000017029	-	100	74.372	ENSPREG00000005312	sar1b	90	74.372	Poecilia_reticulata
ENSLACG00000017029	-	100	67.839	ENSPNYG00000021357	-	100	67.839	Pundamilia_nyererei
ENSLACG00000017029	-	100	76.382	ENSPNYG00000012440	sar1b	100	76.382	Pundamilia_nyererei
ENSLACG00000017029	-	100	68.844	ENSPNAG00000001123	-	100	68.844	Pygocentrus_nattereri
ENSLACG00000017029	-	100	75.879	ENSPNAG00000014683	sar1b	100	75.879	Pygocentrus_nattereri
ENSLACG00000017029	-	100	74.874	ENSSFOG00015018128	-	100	74.874	Scleropages_formosus
ENSLACG00000017029	-	100	75.879	ENSSFOG00015020051	sar1b	100	75.879	Scleropages_formosus
ENSLACG00000017029	-	100	66.834	ENSSMAG00000002165	-	100	66.834	Scophthalmus_maximus
ENSLACG00000017029	-	100	73.367	ENSSMAG00000007106	sar1b	80	73.367	Scophthalmus_maximus
ENSLACG00000017029	-	100	72.864	ENSSDUG00000020926	sar1b	100	72.864	Seriola_dumerili
ENSLACG00000017029	-	100	66.834	ENSSDUG00000019629	-	100	66.834	Seriola_dumerili
ENSLACG00000017029	-	100	72.864	ENSSLDG00000017052	sar1b	100	72.864	Seriola_lalandi_dorsalis
ENSLACG00000017029	-	100	66.834	ENSSLDG00000024197	-	100	66.834	Seriola_lalandi_dorsalis
ENSLACG00000017029	-	100	75.377	ENSSPUG00000010247	-	100	75.377	Sphenodon_punctatus
ENSLACG00000017029	-	100	66.834	ENSSPAG00000015626	-	100	66.834	Stegastes_partitus
ENSLACG00000017029	-	100	75.377	ENSSPAG00000017634	sar1b	100	75.377	Stegastes_partitus
ENSLACG00000017029	-	98	70.918	ENSTRUG00000023908	sar1b	96	70.918	Takifugu_rubripes
ENSLACG00000017029	-	93	75.135	ENSTNIG00000016097	sar1b	93	75.135	Tetraodon_nigroviridis
ENSLACG00000017029	-	57	63.717	ENSXCOG00000006154	-	72	63.717	Xiphophorus_couchianus
ENSLACG00000017029	-	90	78.212	ENSXCOG00000004160	sar1b	87	78.212	Xiphophorus_couchianus
ENSLACG00000017029	-	100	74.372	ENSXMAG00000008294	sar1b	100	74.372	Xiphophorus_maculatus