EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000017143 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 1895 bases
Position: chrJH126745.1:1928246-1930140
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000019495	RVT_1	PF00078.27	1.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000019633	-	1836	-	ENSLACP00000019495	612 (aa)	-	H3BC74

Gene Model

Click here to download ENSLACG00000017143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000017143's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000017143	-	85	68.287	ENSLACG00000010862	-	53	68.287
ENSLACG00000017143	-	97	38.511	ENSLACG00000016284	-	98	38.511
ENSLACG00000017143	-	100	39.748	ENSLACG00000009168	-	98	39.748
ENSLACG00000017143	-	59	43.850	ENSLACG00000010776	-	60	43.850
ENSLACG00000017143	-	96	33.655	ENSLACG00000014947	-	52	33.333
ENSLACG00000017143	-	69	45.558	ENSLACG00000001186	-	65	43.434
ENSLACG00000017143	-	82	37.736	ENSLACG00000002169	-	81	37.736
ENSLACG00000017143	-	89	42.583	ENSLACG00000003314	-	51	42.583

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000017143	-	67	34.048	ENSACLG00000007712	-	72	34.048	Astatotilapia_calliptera
ENSLACG00000017143	-	51	36.760	ENSACLG00000001380	-	54	36.760	Astatotilapia_calliptera
ENSLACG00000017143	-	51	32.317	ENSACLG00000013847	-	75	32.317	Astatotilapia_calliptera
ENSLACG00000017143	-	52	31.902	ENSAMXG00000040471	-	50	31.902	Astyanax_mexicanus
ENSLACG00000017143	-	100	45.412	ENSCSEG00000010442	-	63	45.497	Cynoglossus_semilaevis
ENSLACG00000017143	-	69	44.647	ENSCVAG00000019870	-	59	44.647	Cyprinodon_variegatus
ENSLACG00000017143	-	81	40.504	ENSGAGG00000022002	-	61	40.504	Gopherus_agassizii
ENSLACG00000017143	-	60	40.945	ENSGAGG00000007173	-	60	40.945	Gopherus_agassizii
ENSLACG00000017143	-	66	42.553	ENSGAGG00000011063	-	87	42.553	Gopherus_agassizii
ENSLACG00000017143	-	68	43.111	ENSHCOG00000019997	-	80	43.111	Hippocampus_comes
ENSLACG00000017143	-	56	47.075	ENSMAMG00000019918	-	59	47.075	Mastacembelus_armatus
ENSLACG00000017143	-	50	31.402	ENSMZEG00005017878	-	50	31.402	Maylandia_zebra
ENSLACG00000017143	-	62	30.166	ENSORLG00000023794	-	78	30.166	Oryzias_latipes
ENSLACG00000017143	-	51	34.688	ENSORLG00000027869	-	70	34.688	Oryzias_latipes
ENSLACG00000017143	-	67	32.093	ENSORLG00000027443	-	73	32.093	Oryzias_latipes
ENSLACG00000017143	-	51	33.028	ENSORLG00000027231	-	62	33.028	Oryzias_latipes
ENSLACG00000017143	-	52	36.418	ENSORLG00020000154	-	82	36.418	Oryzias_latipes_hni
ENSLACG00000017143	-	69	32.599	ENSORLG00020019030	-	52	32.599	Oryzias_latipes_hni
ENSLACG00000017143	-	51	36.533	ENSORLG00020002002	-	51	36.533	Oryzias_latipes_hni
ENSLACG00000017143	-	52	35.366	ENSORLG00020016252	-	85	35.366	Oryzias_latipes_hni
ENSLACG00000017143	-	97	32.633	ENSORLG00015013369	-	79	32.633	Oryzias_latipes_hsok
ENSLACG00000017143	-	63	32.266	ENSORLG00015009803	-	85	32.266	Oryzias_latipes_hsok
ENSLACG00000017143	-	66	38.626	ENSOMEG00000005634	-	58	38.626	Oryzias_melastigma
ENSLACG00000017143	-	64	30.935	ENSOMEG00000013073	-	67	30.935	Oryzias_melastigma
ENSLACG00000017143	-	67	51.071	ENSPKIG00000015048	-	64	51.071	Paramormyrops_kingsleyae
ENSLACG00000017143	-	66	38.028	ENSPKIG00000005406	-	71	38.028	Paramormyrops_kingsleyae
ENSLACG00000017143	-	75	42.650	ENSPKIG00000013778	-	64	42.650	Paramormyrops_kingsleyae
ENSLACG00000017143	-	55	43.590	ENSPSIG00000000007	-	89	43.590	Pelodiscus_sinensis
ENSLACG00000017143	-	81	43.786	ENSPMEG00000017235	-	86	43.786	Poecilia_mexicana
ENSLACG00000017143	-	53	33.828	ENSSFOG00015024061	-	52	33.828	Scleropages_formosus
ENSLACG00000017143	-	100	30.838	ENSSDUG00000011043	-	80	30.838	Seriola_dumerili
ENSLACG00000017143	-	81	30.375	ENSSPAG00000008169	-	78	30.375	Stegastes_partitus
ENSLACG00000017143	-	66	46.396	ENSTRUG00000024803	-	86	46.396	Takifugu_rubripes